SRR2934586.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934586.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	368103
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	817	0.22194874804062995	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	458	0.12442169718801532	No Hit
AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	408	0.11083854247316646	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTTACGG	20	7.027031E-4	45.000004	2
TCCGAAC	20	7.027031E-4	45.000004	36
GAGTACG	20	7.027031E-4	45.000004	1
GTCTAGT	20	7.027031E-4	45.000004	19
TACGGCT	20	7.027031E-4	45.000004	15
CGACACC	20	7.027031E-4	45.000004	35
ACGGGTC	20	7.027031E-4	45.000004	5
ACGATTT	20	7.027031E-4	45.000004	11
AGACGCA	20	7.027031E-4	45.000004	19
ACGGCTA	20	7.027031E-4	45.000004	23
GGTATCG	20	7.027031E-4	45.000004	8
AACGAGT	20	7.027031E-4	45.000004	36
CGCAGTA	20	7.027031E-4	45.000004	37
AGCGAAC	20	7.027031E-4	45.000004	41
GCGCTAC	20	7.027031E-4	45.000004	20
GCATGCG	20	7.027031E-4	45.000004	1
CCGCCAC	20	7.027031E-4	45.000004	40
CCCGATT	20	7.027031E-4	45.000004	30
CTATGCG	25	3.885622E-5	45.0	18
TCCAGGT	25	3.885622E-5	45.0	11