##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934586.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 368103 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.073761963363516 33.0 31.0 34.0 30.0 34.0 2 32.27369513424232 33.0 31.0 34.0 30.0 34.0 3 32.16395411067011 33.0 31.0 34.0 30.0 34.0 4 35.90172587563807 37.0 35.0 37.0 35.0 37.0 5 32.13835529729451 37.0 35.0 37.0 0.0 37.0 6 34.019089765636245 37.0 35.0 37.0 19.0 37.0 7 20.691483090330696 32.0 0.0 37.0 0.0 37.0 8 28.07147184347859 35.0 17.0 37.0 17.0 37.0 9 34.858629242358795 37.0 32.0 39.0 32.0 39.0 10 36.26793316001228 37.0 35.0 39.0 32.0 39.0 11 36.754848507075465 39.0 37.0 39.0 33.0 39.0 12 37.10275928204877 39.0 37.0 39.0 34.0 39.0 13 36.85704816314999 39.0 37.0 39.0 33.0 39.0 14 38.27354571954046 40.0 38.0 41.0 34.0 41.0 15 38.46563054362502 40.0 38.0 41.0 34.0 41.0 16 38.54430689236437 40.0 38.0 41.0 34.0 41.0 17 38.53752889816165 40.0 38.0 41.0 34.0 41.0 18 38.457219854225585 40.0 38.0 41.0 34.0 41.0 19 38.39980657587686 40.0 37.0 41.0 34.0 41.0 20 38.370885322858 40.0 37.0 41.0 34.0 41.0 21 38.26958758825655 40.0 37.0 41.0 34.0 41.0 22 38.21756410569868 40.0 37.0 41.0 34.0 41.0 23 38.18351113682855 40.0 37.0 41.0 34.0 41.0 24 38.08424544217244 40.0 37.0 41.0 34.0 41.0 25 37.97497167912242 40.0 36.0 41.0 33.0 41.0 26 37.81427480895293 40.0 36.0 41.0 33.0 41.0 27 37.811080050963994 40.0 36.0 41.0 33.0 41.0 28 37.72838852169094 40.0 36.0 41.0 33.0 41.0 29 37.72503348247637 40.0 36.0 41.0 33.0 41.0 30 37.57088640951038 40.0 36.0 41.0 33.0 41.0 31 37.487817268536254 40.0 36.0 41.0 33.0 41.0 32 37.397467556634965 40.0 36.0 41.0 33.0 41.0 33 37.28105992072871 40.0 36.0 41.0 32.0 41.0 34 37.15320983529067 40.0 36.0 41.0 32.0 41.0 35 37.04466412933336 40.0 35.0 41.0 31.0 41.0 36 36.91736008671486 40.0 35.0 41.0 31.0 41.0 37 36.81447583964271 40.0 35.0 41.0 31.0 41.0 38 36.73928764503413 40.0 35.0 41.0 31.0 41.0 39 36.691648804818215 39.0 35.0 41.0 30.0 41.0 40 36.589457298636525 39.0 35.0 41.0 30.0 41.0 41 36.527773476445454 39.0 35.0 41.0 30.0 41.0 42 36.420175874687246 39.0 35.0 41.0 30.0 41.0 43 36.31776975466106 39.0 35.0 41.0 30.0 41.0 44 36.18390776494623 39.0 35.0 40.0 29.0 41.0 45 36.113571473201795 39.0 35.0 40.0 29.0 41.0 46 35.99752514921096 39.0 35.0 40.0 29.0 41.0 47 35.967166798423264 39.0 35.0 40.0 29.0 41.0 48 35.86310625015281 39.0 35.0 40.0 28.0 41.0 49 35.755921576297936 39.0 35.0 40.0 28.0 41.0 50 35.630089947650525 38.0 35.0 40.0 27.0 41.0 51 33.88477953181582 37.0 32.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 10.0 9 22.0 10 31.0 11 13.0 12 10.0 13 8.0 14 13.0 15 22.0 16 34.0 17 69.0 18 88.0 19 205.0 20 327.0 21 591.0 22 862.0 23 1426.0 24 2170.0 25 2926.0 26 3687.0 27 4021.0 28 4573.0 29 5243.0 30 6582.0 31 8391.0 32 11341.0 33 17108.0 34 24308.0 35 31822.0 36 39713.0 37 71063.0 38 78468.0 39 52949.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.91300532731328 20.444006161318978 25.948172114870022 12.694816396497718 2 32.43874676381339 25.32198868251549 25.481726581962118 16.757537971709006 3 32.08449808885013 24.304338731279017 27.124201650081638 16.486961529789216 4 29.149450018065597 26.43336240128442 25.796312445158016 18.620875135491968 5 22.844692925621363 37.99751699931812 22.300551747744517 16.857238327315997 6 25.76262622146519 37.05049945259887 23.86804780183807 13.318826524097874 7 48.92136168409385 43.8132805220278 4.747584235933964 2.5177735579443796 8 85.23592581424221 5.463144826312201 6.608204768773958 2.6927245906716326 9 78.52068578631524 9.0844138732909 8.36179004246094 4.033110297932915 10 39.15616009649473 31.630005732091288 16.427738975232476 12.786095196181504 11 32.78185725191047 26.82455725707207 23.643925749043067 16.749659741974394 12 30.625395609381066 24.274727454000647 27.331752254124524 17.768124682493756 13 24.487167993740883 27.611565241250414 28.09023561340168 19.811031151607022 14 19.867537075220795 30.45370453378538 28.467847314474483 21.21091107651934 15 20.356530644955352 27.92071784256037 32.86824611589691 18.854505396587367 16 22.802041819816736 24.83951502704406 32.793267101870946 19.56517605126826 17 22.168251820821887 26.699592233695462 28.334732398268965 22.79742354721369 18 23.142435676970848 26.784622782210416 29.25621361412431 20.81672792669443 19 25.21957169596553 27.74359350507874 27.299424345903184 19.737410453052544 20 27.013906433797064 27.086712143068652 27.41026288837635 18.489118534757935 21 24.94763693857426 27.59390714012111 27.58141063778345 19.877045283521188 22 23.463269791335577 26.950608932825865 27.80390271201267 21.782218563825886 23 22.40378372357737 28.287191356766993 28.40672311825766 20.90230180139798 24 21.99221413571745 27.080463891899818 31.05679660312467 19.87052536925806 25 22.155483655389933 28.094853886004735 28.343697280380763 21.405965178224573 26 21.175051548072144 30.280926805812502 28.024493144581815 20.51952850153354 27 21.071819572239292 29.862022314406566 28.65013325074775 20.416024862606392 28 20.242975471539214 29.236653871334926 30.678098249674683 19.842272407451176 29 21.000643841533485 28.008465022018292 30.233657427404832 20.757233709043394 30 20.535013297908467 28.505065158393165 30.068757929166566 20.891163614531802 31 23.81235686750719 28.51185673575059 27.199452327201897 20.476334069540318 32 23.284243812193868 28.284474725824023 27.70882062900873 20.72246083297338 33 22.858547743430506 30.019586909098813 26.670795945699982 20.4510694017707 34 20.214179183543738 29.593347514146856 28.536578077331615 21.65589522497779 35 21.988682515491586 28.32984246257162 28.334189072080367 21.347285949856428 36 22.389385579579628 29.10788556463816 28.130441751357637 20.372287104424576 37 21.94983469300712 30.915803457184538 27.64199150781167 19.492370341996672 38 20.830039418314982 29.99649554608357 27.887031618867546 21.286433416733903 39 21.26252706443577 29.038068149403834 28.717505698133404 20.981899088026992 40 21.90066367293937 28.982377215072958 28.142666590601 20.97429252138668 41 19.716492394791675 29.031548235140708 29.04757635770423 22.204383012363387 42 21.002545483193565 29.19155779768163 26.661016074305287 23.144880644819523 43 22.241600856282073 27.887303281961845 28.213027332023916 21.658068529732166 44 21.368204008117292 29.453169357489617 27.24780835798676 21.930818276406335 45 20.711050983012907 30.602304246365826 26.582233776959168 22.1044109936621 46 20.625205445215062 31.662876966501223 26.785709434587602 20.926208153696113 47 21.944944757309777 28.80416622521414 28.145111558449678 21.105777459026413 48 21.71484611644024 27.899528121205208 29.074199340945334 21.311426421409223 49 20.619228857140527 27.687630907653567 28.799819615705385 22.89332061950052 50 19.174796184763505 29.358087274485673 29.75281375049918 21.71430279025164 51 20.189186178868415 28.999491990013667 27.79385117752368 23.017470653594238 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 302.0 1 733.0 2 1164.0 3 2001.0 4 2838.0 5 2088.0 6 1338.0 7 1220.5 8 1103.0 9 1081.0 10 1059.0 11 1071.0 12 1083.0 13 1085.5 14 1088.0 15 1056.0 16 1024.0 17 1081.0 18 1138.0 19 1242.0 20 1346.0 21 1639.0 22 1932.0 23 2250.5 24 2569.0 25 3035.5 26 4053.5 27 4605.0 28 5654.5 29 6704.0 30 8207.5 31 9711.0 32 11154.0 33 12597.0 34 13813.0 35 15029.0 36 15684.0 37 16339.0 38 18097.0 39 19855.0 40 21566.0 41 23277.0 42 24387.5 43 25498.0 44 26174.0 45 26850.0 46 27053.5 47 27257.0 48 26861.0 49 26465.0 50 24803.5 51 23142.0 52 21542.0 53 19942.0 54 19184.5 55 18427.0 56 17439.5 57 16452.0 58 15428.5 59 14405.0 60 13393.5 61 12382.0 62 10963.0 63 9544.0 64 8012.5 65 6481.0 66 5306.0 67 4131.0 68 3574.5 69 3018.0 70 2403.5 71 1789.0 72 1408.0 73 1027.0 74 867.0 75 581.5 76 456.0 77 343.5 78 231.0 79 185.0 80 139.0 81 103.5 82 68.0 83 52.0 84 36.0 85 31.5 86 27.0 87 21.5 88 16.0 89 10.5 90 5.0 91 3.5 92 2.0 93 2.0 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 368103.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.631710939551176 #Duplication Level Percentage of deduplicated Percentage of total 1 68.07450793627558 22.213876653287272 2 8.044103207038418 5.249857012399885 3 4.255455469881754 4.1658837842794 4 3.034955308308434 3.96143137340709 5 2.3203644233082117 3.7858730567905967 6 1.805807964374302 3.535596210348093 7 1.4904416624885402 3.40449630518131 8 1.3441168515827875 3.5088666055863307 9 1.1292845155792341 3.3165437292803386 >10 8.4332558840701 44.29332139436504 >50 0.047645509805956235 1.0171367620628975 >100 0.019225381149771816 1.3242689675021098 >500 8.358861369466006E-4 0.22284814550962384 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 817 0.22194874804062995 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 458 0.12442169718801532 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 408 0.11083854247316646 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.01711477494070953 0.0 2 0.0 0.0 0.0 0.08801884255222044 0.0 3 0.0 0.0 0.0 0.12007508767926368 0.0 4 0.0 0.0 0.0 0.1581079208808404 0.0 5 0.0 0.0 0.0 0.26948978954260083 0.0 6 0.0 0.0 0.0 0.35234703330317874 0.0 7 0.0 0.0 0.0 0.44036587585539916 0.0 8 0.0 0.0 0.0 0.6310733680518767 0.0 9 0.0 0.0 0.0 0.7049657297006544 0.0 10 0.0 0.0 0.0 0.9119730075549507 0.0 11 2.7166309429697664E-4 0.0 0.0 1.200750876792637 0.0 12 2.7166309429697664E-4 0.0 0.0 1.4112897748727937 0.0 13 2.7166309429697664E-4 0.0 0.0 1.513978424517051 0.0 14 2.7166309429697664E-4 0.0 0.0 1.560161150547537 0.0 15 2.7166309429697664E-4 0.0 0.0 1.6359551538563935 0.0 16 2.7166309429697664E-4 0.0 0.0 1.8326392341274045 0.0 17 2.7166309429697664E-4 0.0 0.0 2.0429064691132646 0.0 18 2.7166309429697664E-4 0.0 0.0 2.2765367302086643 0.0 19 2.7166309429697664E-4 0.0 0.0 2.4259514320720017 0.0 20 2.7166309429697664E-4 0.0 0.0 2.5875909731787026 0.0 21 2.7166309429697664E-4 0.0 0.0 2.77829846537518 0.0 22 2.7166309429697664E-4 0.0 0.0 3.0067671276789376 0.0 23 2.7166309429697664E-4 0.0 0.0 3.2268142340594888 0.0 24 2.7166309429697664E-4 0.0 0.0 3.411001811992839 0.0 25 2.7166309429697664E-4 0.0 0.0 3.5805195828341523 0.0 26 2.7166309429697664E-4 0.0 0.0 3.7416157977522597 0.0 27 2.7166309429697664E-4 0.0 0.0 3.901625360293179 0.0 28 2.7166309429697664E-4 0.0 0.0 4.052126714533704 0.0 29 2.7166309429697664E-4 0.0 0.0 4.234684313901272 0.0 30 2.7166309429697664E-4 0.0 0.0 4.441148265566975 0.0 31 2.7166309429697664E-4 0.0 0.0 4.633214073234937 0.0 32 2.7166309429697664E-4 0.0 0.0 4.811153399999457 0.0 33 2.7166309429697664E-4 0.0 0.0 4.992081020801243 0.0 34 2.7166309429697664E-4 0.0 0.0 5.172193652320138 0.0 35 2.7166309429697664E-4 0.0 0.0 5.3743109944770895 0.0 36 2.7166309429697664E-4 0.0 0.0 5.57018008546521 0.0 37 2.7166309429697664E-4 0.0 0.0 5.776915700225208 0.0 38 2.7166309429697664E-4 0.0 0.0 5.997506132794354 0.0 39 2.7166309429697664E-4 0.0 0.0 6.221084859400766 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTACGG 20 7.027031E-4 45.000004 2 TCCGAAC 20 7.027031E-4 45.000004 36 GAGTACG 20 7.027031E-4 45.000004 1 GTCTAGT 20 7.027031E-4 45.000004 19 TACGGCT 20 7.027031E-4 45.000004 15 CGACACC 20 7.027031E-4 45.000004 35 ACGGGTC 20 7.027031E-4 45.000004 5 ACGATTT 20 7.027031E-4 45.000004 11 AGACGCA 20 7.027031E-4 45.000004 19 ACGGCTA 20 7.027031E-4 45.000004 23 GGTATCG 20 7.027031E-4 45.000004 8 AACGAGT 20 7.027031E-4 45.000004 36 CGCAGTA 20 7.027031E-4 45.000004 37 AGCGAAC 20 7.027031E-4 45.000004 41 GCGCTAC 20 7.027031E-4 45.000004 20 GCATGCG 20 7.027031E-4 45.000004 1 CCGCCAC 20 7.027031E-4 45.000004 40 CCCGATT 20 7.027031E-4 45.000004 30 CTATGCG 25 3.885622E-5 45.0 18 TCCAGGT 25 3.885622E-5 45.0 11 >>END_MODULE