SRR2934585.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934585.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	496901
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4432	0.8919281708026348	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2483	0.4996971227669093	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCG	1271	0.2557853576466942	No Hit
GAATCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTC	1076	0.21654212811002593	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	933	0.18776375978313586	No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCG	794	0.1597903807800749	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCCTTGTCGATCGTATGC	768	0.1545579501751858	No Hit
GAATCTATCTCTTATACACATCTGACGCCTTGTCGATCGTATGCCGTCTTC	601	0.12094964590532119	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGCGTTA	20	7.029417E-4	45.0	1
GCGAATA	20	7.029417E-4	45.0	1
TCGATCA	50	2.1827873E-11	45.0	17
GCGCAAA	20	7.029417E-4	45.0	1
TCCGTCC	20	7.029417E-4	45.0	43
CGGTAAT	20	7.029417E-4	45.0	40
CGACGGT	30	2.1630058E-6	44.999996	28
CGGTCTA	30	2.1630058E-6	44.999996	31
CGTTTTA	845	0.0	44.467457	1
CGTTATT	405	0.0	42.77778	1
CGTTTTT	1745	0.0	41.647564	1
TATGCGG	60	3.6379788E-12	41.249996	2
AGGCGAT	290	0.0	40.344826	7
CGTAGGA	40	3.452933E-7	39.375	4
GTTTTAT	1060	0.0	38.84434	2
TCACGAC	35	6.2411327E-6	38.571426	25
CTCACGT	35	6.2411327E-6	38.571426	45
TACGGCT	140	0.0	38.571426	7
ACGACCA	170	0.0	38.38235	28
AAACACG	180	0.0	37.500004	40