SRR2934584.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934584.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	443728
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1102	0.24835034074928786	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	573	0.12913316265820504	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTACGG	35	1.2096643E-7	45.000004	2
CGACGGT	50	2.1827873E-11	45.0	28
GCGAAGT	25	3.886921E-5	45.0	36
TAGACGG	40	6.7993824E-9	45.0	2
CGGTTTA	20	7.0285995E-4	45.0	1
CCGTCGA	20	7.0285995E-4	45.0	17
GTAGACG	20	7.0285995E-4	45.0	1
CCAACGG	20	7.0285995E-4	45.0	2
TCGATAG	30	2.1624783E-6	44.999996	2
CGTTATT	70	0.0	41.785717	1
CGTTTTA	225	0.0	41.0	1
CACGACG	55	6.002665E-11	40.909092	26
AACGAGC	55	6.002665E-11	40.909092	15
CGGTCTA	55	6.002665E-11	40.909092	31
AGGCGAT	270	0.0	40.833332	7
CGCATGG	45	1.9237632E-8	40.000004	2
CGAATAT	90	0.0	40.000004	14
GCTACGA	90	0.0	40.000004	10
TCGAAAG	45	1.9237632E-8	40.000004	2
TCGATCA	40	3.4518234E-7	39.375	17