SRR2934583.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934583.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	477823
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5729	1.1989795384483375	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3027	0.6334981781956917	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1170	0.2448605445949651	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	659	0.1379171785368222	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCATAG	20	7.0291426E-4	45.000004	2
CTAACGG	30	2.1628293E-6	45.000004	2
ACGTGCA	20	7.0291426E-4	45.000004	1
GCGATAC	20	7.0291426E-4	45.000004	9
TTACGCG	20	7.0291426E-4	45.000004	1
CGTCCAC	20	7.0291426E-4	45.000004	41
CGGTTTA	155	0.0	45.0	1
CGCGCAA	25	3.8873717E-5	45.0	18
GCGCAAA	25	3.8873717E-5	45.0	1
TACGCGG	25	3.8873717E-5	45.0	2
AACGACG	25	3.8873717E-5	45.0	13
AACGAAG	25	3.8873717E-5	45.0	2
AATAGGC	55	1.8189894E-12	45.0	4
CGCAATC	25	3.8873717E-5	45.0	20
ACGCGCA	25	3.8873717E-5	45.0	17
CGTTTTA	1165	0.0	43.648067	1
CGTTTTT	2550	0.0	42.97059	1
CGTTATT	595	0.0	42.73109	1
CATACGA	90	0.0	42.5	18
CGGTTTT	310	0.0	42.09677	1