SRR2934581.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934581.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	339731
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1136	0.3343822023895376	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	719	0.21163803126591332	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CAATTAG	25	3.8849845E-5	45.000004	2
ACGATAG	25	3.8849845E-5	45.000004	2
CGGTCTA	25	3.8849845E-5	45.000004	31
TCGTGAC	20	7.026263E-4	45.0	17
GTATGCG	20	7.026263E-4	45.0	1
CTACGAT	20	7.026263E-4	45.0	27
CGCTAAG	20	7.026263E-4	45.0	2
TATTACG	20	7.026263E-4	45.0	1
GCGATAC	20	7.026263E-4	45.0	9
GCTACGA	70	0.0	45.0	10
AATAGGC	20	7.026263E-4	45.0	4
TCGACGT	35	1.2085547E-7	45.0	26
CGTCATA	20	7.026263E-4	45.0	38
TAGTCTC	20	7.026263E-4	45.0	42
ATCTGCG	20	7.026263E-4	45.0	14
CGCTTAG	20	7.026263E-4	45.0	2
AGGCGAT	115	0.0	44.999996	7
CGAATAT	60	0.0	44.999996	14
GCGGCTA	30	2.1609721E-6	44.999996	24
TAATCGT	30	2.1609721E-6	44.999996	21