##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934581.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 339731 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.96634984737925 33.0 31.0 34.0 30.0 34.0 2 32.17104120613073 33.0 31.0 34.0 30.0 34.0 3 32.02497564249362 33.0 31.0 34.0 30.0 34.0 4 35.80229946634249 37.0 35.0 37.0 35.0 37.0 5 32.062832064191966 37.0 35.0 37.0 0.0 37.0 6 33.95361624343966 37.0 35.0 37.0 19.0 37.0 7 20.815521692162328 32.0 0.0 37.0 0.0 37.0 8 28.134412226143624 35.0 17.0 37.0 17.0 37.0 9 34.84807097379986 37.0 32.0 39.0 32.0 39.0 10 36.27814359007568 37.0 35.0 39.0 32.0 39.0 11 36.68270778939808 38.0 35.0 39.0 33.0 39.0 12 36.94522136631629 39.0 37.0 39.0 33.0 39.0 13 36.62068813266967 39.0 35.0 39.0 33.0 39.0 14 37.91089420747591 40.0 37.0 41.0 33.0 41.0 15 38.13920719628177 40.0 37.0 41.0 33.0 41.0 16 38.253500563681264 40.0 37.0 41.0 34.0 41.0 17 38.25993212276772 40.0 37.0 41.0 34.0 41.0 18 38.154725356237726 40.0 37.0 41.0 34.0 41.0 19 38.10214552101515 40.0 37.0 41.0 34.0 41.0 20 38.05536439123895 40.0 37.0 41.0 34.0 41.0 21 37.955606053024304 40.0 36.0 41.0 33.0 41.0 22 37.95065213359982 40.0 36.0 41.0 33.0 41.0 23 37.91351392719534 40.0 36.0 41.0 34.0 41.0 24 37.81256346933309 40.0 36.0 41.0 33.0 41.0 25 37.67056288651904 40.0 36.0 41.0 33.0 41.0 26 37.54291189205578 39.0 35.0 41.0 33.0 41.0 27 37.463157615878444 39.0 35.0 41.0 33.0 41.0 28 37.37781951014185 39.0 35.0 41.0 33.0 41.0 29 37.36914794352002 39.0 35.0 41.0 33.0 41.0 30 37.2025484868911 39.0 35.0 41.0 32.0 41.0 31 37.06203437425493 39.0 35.0 41.0 32.0 41.0 32 36.94758205756908 39.0 35.0 41.0 31.0 41.0 33 36.832835390352955 39.0 35.0 41.0 31.0 41.0 34 36.64402718621498 39.0 35.0 41.0 31.0 41.0 35 36.47580880166956 39.0 35.0 41.0 30.0 41.0 36 36.29324377227866 39.0 35.0 41.0 30.0 41.0 37 36.21095219453038 39.0 35.0 41.0 30.0 41.0 38 36.07757902575862 39.0 35.0 40.0 29.0 41.0 39 36.0062637792842 39.0 35.0 40.0 29.0 41.0 40 35.854061007090905 39.0 35.0 40.0 28.0 41.0 41 35.722601116765915 39.0 35.0 40.0 27.0 41.0 42 35.626460346568315 38.0 35.0 40.0 27.0 41.0 43 35.53904118258269 38.0 35.0 40.0 27.0 41.0 44 35.401688394641646 38.0 34.0 40.0 26.0 41.0 45 35.29558385899432 38.0 34.0 40.0 26.0 41.0 46 35.18473439279901 38.0 34.0 40.0 26.0 41.0 47 35.13754117228042 38.0 34.0 40.0 26.0 41.0 48 35.01943302200859 38.0 34.0 40.0 25.0 41.0 49 34.91495624479367 38.0 34.0 40.0 24.0 41.0 50 34.732123356420225 37.0 34.0 40.0 24.0 41.0 51 32.86267664711198 35.0 31.0 39.0 19.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 13.0 9 24.0 10 21.0 11 14.0 12 19.0 13 21.0 14 18.0 15 21.0 16 31.0 17 65.0 18 112.0 19 228.0 20 431.0 21 679.0 22 1053.0 23 1644.0 24 2491.0 25 3373.0 26 4120.0 27 4763.0 28 5164.0 29 6024.0 30 7218.0 31 9316.0 32 12072.0 33 18214.0 34 24961.0 35 31603.0 36 38747.0 37 63367.0 38 63537.0 39 40362.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.29255793554312 20.84060624435215 25.740953872328404 14.125881947776328 2 32.140134400452126 24.43433186844886 25.97702299760693 17.448510733492085 3 31.95793142221346 23.72112053359864 27.580055985470857 16.740892058717044 4 27.934748374449196 26.34437245938698 26.52186582914129 19.199013337022528 5 23.15861667024793 36.73788968330827 23.229555148043598 16.873938498400204 6 26.779422543129712 33.17330476170853 25.44925249682837 14.598020198333387 7 49.13534531732459 42.91542426213681 5.2406168409712395 2.7086135795673636 8 84.47830783767158 4.603642293461592 7.925682378116804 2.9923674907500346 9 77.95226223100042 7.7078629857151695 9.63762506218155 4.702249721102873 10 41.88931831360694 29.83419234629751 16.054760972651895 12.221728367443655 11 34.1084563963842 24.054914034927634 24.60534952653717 17.231280042150996 12 31.199684456231548 22.172542393835123 28.66591509164604 17.96185805828729 13 25.45013554841919 26.021764278208348 29.456834966488195 19.07126520688427 14 21.1705731887876 27.898837609755955 30.801133838242613 20.129455363213836 15 19.914579476114927 25.187869225946415 35.424203266702186 19.47334803123648 16 24.348087163079025 23.080319429195452 32.70440436698447 19.867189040741057 17 25.067479859064967 23.44796324150578 28.473409844847836 23.011147054581418 18 25.815718907017608 23.016445364126323 30.56418166137326 20.6036540674828 19 26.385581533625135 25.312085149721398 27.84938672067018 20.452946595983292 20 27.345752963373965 25.30973034547922 28.385399036296366 18.959117654850456 21 26.219567834551455 24.830233331665347 29.549555383524023 19.400643450259174 22 25.483397158339983 23.006143095566784 29.033558903956365 22.476900842136867 23 22.134865525960244 25.503707344928785 29.664352090330294 22.69707503878068 24 22.34679790775643 24.347204111488207 32.46215388057021 20.843844100185148 25 22.591697548943134 25.825726825046875 30.4022888697234 21.18028675628659 26 22.88693113080643 26.89245314675434 28.564952859762577 21.655662862676646 27 21.866123491821472 26.61811845254039 30.279839049130047 21.23591900650809 28 20.613073284451524 26.556893542243714 31.19556354880773 21.63446962449703 29 21.757508146150926 25.503707344928785 30.851467778919208 21.88731673000109 30 22.89487859512379 25.044814868233985 30.904156523837976 21.156150012804247 31 24.53146754343878 25.328568779416656 29.088308102587046 21.05165557455752 32 25.25056588889445 25.732123356420228 28.724785197700538 20.292525556984792 33 25.879004271026197 25.15578501814671 27.56622151054805 21.398989200279043 34 22.44864319123071 25.747723934524668 29.588409653519992 22.21522322072463 35 22.13515987649052 26.626948968448566 29.874812719475113 21.363078435585802 36 25.683555518925267 26.13008527334862 28.126959270717126 20.059399937008987 37 23.54892547338924 27.618615904936554 28.039537163226196 20.792921458448006 38 22.50957375099711 27.62509161660255 27.84938672067018 22.015947911730162 39 22.727687493929018 26.05620329025023 28.77335303519549 22.44275618062526 40 24.56001954487521 26.09594061183701 28.471938092196474 20.872101751091304 41 21.730722247896132 25.49252202477843 28.851061575187426 23.925694152138018 42 22.97582499094872 25.616737948553414 28.132551930792303 23.27488512970556 43 22.86250003679382 25.587891596586708 29.312897557184947 22.236710809434523 44 21.758685548272016 25.572291018482268 29.450359254822196 23.218664178423516 45 21.80754773629725 27.25185514421704 27.634216483040998 23.306380636444718 46 22.157236166260954 26.855953681000557 28.22144579093459 22.765364361803897 47 21.469044626483893 27.18179971801219 29.513055917770238 21.836099737733676 48 21.829918376597956 25.966720729047392 30.33135039192773 21.87201050242692 49 23.12535506032714 25.832202536712867 28.970273539947783 22.072168863012205 50 20.903008556769915 27.457017463816964 29.28876081370261 22.35121316571052 51 21.123477103944 27.633333431450176 27.602426625771564 23.640762838834252 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 290.0 1 722.0 2 1154.0 3 2414.5 4 3675.0 5 2562.5 6 1450.0 7 1312.5 8 1175.0 9 1197.0 10 1219.0 11 1250.5 12 1282.0 13 1226.5 14 1171.0 15 1157.0 16 1143.0 17 1130.5 18 1118.0 19 1205.0 20 1292.0 21 1414.0 22 1536.0 23 1665.0 24 1794.0 25 2104.0 26 2890.5 27 3367.0 28 4157.5 29 4948.0 30 5811.5 31 6675.0 32 7843.0 33 9011.0 34 9909.5 35 10808.0 36 11478.0 37 12148.0 38 13441.5 39 14735.0 40 16320.0 41 17905.0 42 19439.5 43 20974.0 44 22119.5 45 23265.0 46 23514.0 47 23763.0 48 24060.5 49 24358.0 50 23886.5 51 23415.0 52 22072.5 53 20730.0 54 19789.5 55 18849.0 56 18328.0 57 17807.0 58 16617.0 59 15427.0 60 14493.5 61 13560.0 62 12290.0 63 11020.0 64 9668.5 65 8317.0 66 7175.0 67 6033.0 68 5230.0 69 4427.0 70 3726.0 71 3025.0 72 2438.5 73 1852.0 74 1553.5 75 967.5 76 680.0 77 500.5 78 321.0 79 254.0 80 187.0 81 131.5 82 76.0 83 54.5 84 33.0 85 29.0 86 25.0 87 17.0 88 9.0 89 7.5 90 6.0 91 4.0 92 2.0 93 3.0 94 4.0 95 2.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 339731.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.97321110982496 #Duplication Level Percentage of deduplicated Percentage of total 1 65.23713536530117 20.206035658697008 2 8.665448004063022 5.367935007821106 3 4.3803187688933605 4.070176138717879 4 3.1446357218612553 3.8959786430682186 5 2.466990392343754 3.8205307113986495 6 1.9631372929124826 3.648279948656917 7 1.7337776397374045 3.759046259715648 8 1.5822269071886386 3.92053184159993 9 1.3289897696053241 3.7046772627105007 >10 9.449484550821932 45.82503107627871 >50 0.039879656059725016 0.8059686564966102 >100 0.005981948408958752 0.4029843282483051 >500 9.969914014931254E-4 0.2220273808509819 >1k 9.969914014931254E-4 0.3507970857395208 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1136 0.3343822023895376 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 719 0.21163803126591332 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.943505302724803E-4 0.0 0.0 0.025608496133705784 0.0 2 2.943505302724803E-4 0.0 0.0 0.13069163544098125 0.0 3 2.943505302724803E-4 0.0 0.0 0.16630804960395137 0.0 4 2.943505302724803E-4 0.0 0.0 0.21870244399245287 0.0 5 2.943505302724803E-4 0.0 0.0 0.3720590702644151 0.0 6 2.943505302724803E-4 0.0 0.0 0.4836179212376851 0.0 7 2.943505302724803E-4 0.0 0.0 0.6022411849374947 0.0 8 2.943505302724803E-4 0.0 0.0 0.8753984770303563 0.0 9 2.943505302724803E-4 0.0 0.0 0.971356749899185 0.0 10 2.943505302724803E-4 0.0 0.0 1.2489292999461339 0.0 11 2.943505302724803E-4 0.0 0.0 1.643064659980985 0.0 12 2.943505302724803E-4 0.0 0.0 1.948306159873547 0.0 13 2.943505302724803E-4 0.0 0.0 2.075759939481531 0.0 14 2.943505302724803E-4 0.0 0.0 2.116380312659133 0.0 15 2.943505302724803E-4 0.0 0.0 2.216753843482049 0.0 16 2.943505302724803E-4 0.0 0.0 2.448407710806491 0.0 17 2.943505302724803E-4 0.0 0.0 2.713911889112268 0.0 18 2.943505302724803E-4 0.0 0.0 3.010028522566383 0.0 19 2.943505302724803E-4 0.0 0.0 3.1889936449720513 0.0 20 2.943505302724803E-4 0.0 0.0 3.3679587673777194 0.0 21 2.943505302724803E-4 0.0 0.0 3.600495686292979 0.0 22 2.943505302724803E-4 0.0 0.0 3.846867080131045 0.0 23 2.943505302724803E-4 0.0 0.0 4.108839052073552 0.0 24 2.943505302724803E-4 0.0 0.0 4.320771433869738 0.0 25 2.943505302724803E-4 0.0 0.0 4.506506618471673 0.0 26 2.943505302724803E-4 0.0 0.0 4.679879080802164 0.0 27 2.943505302724803E-4 0.0 0.0 4.882686596159903 0.0 28 2.943505302724803E-4 0.0 0.0 5.07460314189756 0.0 29 2.943505302724803E-4 0.0 0.0 5.295954740662466 0.0 30 2.943505302724803E-4 0.0 0.0 5.543209186091349 0.0 31 2.943505302724803E-4 0.0 0.0 5.768092991219524 0.0 32 2.943505302724803E-4 0.0 0.0 5.990916342635791 0.0 33 2.943505302724803E-4 0.0 0.0 6.22345326155105 0.0 34 2.943505302724803E-4 0.0 0.0 6.468352902737754 0.0 35 2.943505302724803E-4 0.0 0.0 6.734151431573804 0.0 36 2.943505302724803E-4 0.0 0.0 6.957269133520344 0.0 37 2.943505302724803E-4 0.0 0.0 7.196870465162143 0.0 38 2.943505302724803E-4 0.0 0.0 7.47061645831555 0.0 39 2.943505302724803E-4 0.0 0.0 7.857687405623861 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAATTAG 25 3.8849845E-5 45.000004 2 ACGATAG 25 3.8849845E-5 45.000004 2 CGGTCTA 25 3.8849845E-5 45.000004 31 TCGTGAC 20 7.026263E-4 45.0 17 GTATGCG 20 7.026263E-4 45.0 1 CTACGAT 20 7.026263E-4 45.0 27 CGCTAAG 20 7.026263E-4 45.0 2 TATTACG 20 7.026263E-4 45.0 1 GCGATAC 20 7.026263E-4 45.0 9 GCTACGA 70 0.0 45.0 10 AATAGGC 20 7.026263E-4 45.0 4 TCGACGT 35 1.2085547E-7 45.0 26 CGTCATA 20 7.026263E-4 45.0 38 TAGTCTC 20 7.026263E-4 45.0 42 ATCTGCG 20 7.026263E-4 45.0 14 CGCTTAG 20 7.026263E-4 45.0 2 AGGCGAT 115 0.0 44.999996 7 CGAATAT 60 0.0 44.999996 14 GCGGCTA 30 2.1609721E-6 44.999996 24 TAATCGT 30 2.1609721E-6 44.999996 21 >>END_MODULE