SRR2934577.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934577.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	671618
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12407	1.8473298809740062	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7287	1.0849917661527833	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1203	0.17911967815037716	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TACGCGG	30	2.164148E-6	45.000004	2
TTGGCGA	20	7.0311903E-4	45.0	1
GCGCAAA	20	7.0311903E-4	45.0	1
TTACGCG	20	7.0311903E-4	45.0	1
ACCCGTT	20	7.0311903E-4	45.0	43
CGTTTAG	20	7.0311903E-4	45.0	2
CGTTTTA	2820	0.0	44.521275	1
CGGTTTA	230	0.0	44.021736	1
CGTTATT	1195	0.0	43.870293	1
CGTTTTT	5325	0.0	43.394367	1
GTTTTAT	3105	0.0	41.666668	2
CACGACC	50	1.0804797E-9	40.5	27
ACGGGCT	130	0.0	39.807693	5
TAGACGG	40	3.4553523E-7	39.375	2
TACGGGT	40	3.4553523E-7	39.375	4
TTGACGG	80	0.0	39.375	2
AGGCGAT	320	0.0	38.671875	7
ACGCGAG	35	6.2444087E-6	38.57143	2
TTTGACG	35	6.2444087E-6	38.57143	1
TTACACG	245	0.0	38.57143	34