##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934575.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1235087 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.808565712374918 31.0 31.0 34.0 30.0 34.0 2 32.000882528923064 33.0 31.0 34.0 30.0 34.0 3 31.525502252068073 31.0 31.0 34.0 28.0 34.0 4 35.51858452076655 37.0 35.0 37.0 33.0 37.0 5 31.99577195776492 37.0 35.0 37.0 10.0 37.0 6 33.87910244379546 37.0 35.0 37.0 19.0 37.0 7 20.888020034216215 32.0 0.0 37.0 0.0 37.0 8 28.153244265383734 35.0 17.0 37.0 17.0 37.0 9 34.823129868584154 37.0 32.0 39.0 32.0 39.0 10 36.2507523761484 37.0 35.0 39.0 32.0 39.0 11 36.68755804246988 38.0 35.0 39.0 33.0 39.0 12 37.03251754734687 39.0 37.0 39.0 34.0 39.0 13 36.840510830411134 39.0 37.0 39.0 33.0 39.0 14 38.14344495569948 40.0 38.0 41.0 33.0 41.0 15 38.314651518476026 40.0 38.0 41.0 34.0 41.0 16 38.37590793199183 40.0 38.0 41.0 34.0 41.0 17 38.35637813368613 40.0 38.0 41.0 34.0 41.0 18 38.19669221682359 40.0 37.0 41.0 34.0 41.0 19 38.090142637725116 40.0 37.0 41.0 34.0 41.0 20 37.97526409070778 40.0 36.0 41.0 34.0 41.0 21 37.844946955153766 40.0 36.0 41.0 33.0 41.0 22 37.79383557595538 39.0 36.0 41.0 33.0 41.0 23 37.691271950882815 39.0 35.0 41.0 33.0 41.0 24 37.50162782055029 39.0 35.0 41.0 33.0 41.0 25 37.327455474796515 39.0 35.0 41.0 33.0 41.0 26 37.152976268068564 39.0 35.0 41.0 32.0 41.0 27 37.0664414733537 39.0 35.0 41.0 32.0 41.0 28 36.91429834497489 39.0 35.0 41.0 32.0 41.0 29 36.83148150697076 39.0 35.0 41.0 31.0 41.0 30 36.626568816609684 39.0 35.0 40.0 31.0 41.0 31 36.39836788825403 39.0 35.0 40.0 30.0 41.0 32 36.21833603624684 38.0 35.0 40.0 30.0 41.0 33 35.92439479971856 38.0 35.0 40.0 29.0 41.0 34 35.59313716361682 38.0 35.0 40.0 26.0 41.0 35 35.33682161661486 38.0 34.0 40.0 25.0 41.0 36 35.12915527408191 38.0 34.0 40.0 24.0 41.0 37 35.00770957835359 38.0 34.0 40.0 23.0 41.0 38 34.83223691934253 38.0 34.0 40.0 23.0 41.0 39 34.69698409909585 38.0 34.0 40.0 22.0 41.0 40 34.569031979123736 38.0 34.0 40.0 21.0 41.0 41 34.397774407794756 38.0 33.0 40.0 21.0 41.0 42 34.24753316972812 38.0 33.0 40.0 20.0 41.0 43 34.15346368312515 38.0 33.0 40.0 20.0 41.0 44 33.96777797839343 38.0 33.0 40.0 18.0 41.0 45 33.8724915734681 37.0 33.0 40.0 19.0 41.0 46 33.759506820167324 37.0 33.0 40.0 18.0 41.0 47 33.677918235719424 37.0 33.0 40.0 18.0 41.0 48 33.55694619083514 37.0 33.0 40.0 18.0 41.0 49 33.42451989212096 37.0 32.0 40.0 18.0 41.0 50 33.229685843993174 37.0 32.0 40.0 17.0 41.0 51 31.28167084585944 35.0 28.0 39.0 10.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 5.0 8 32.0 9 64.0 10 68.0 11 49.0 12 35.0 13 40.0 14 54.0 15 80.0 16 147.0 17 296.0 18 552.0 19 1074.0 20 1908.0 21 3271.0 22 5520.0 23 9063.0 24 14424.0 25 20330.0 26 25639.0 27 27690.0 28 27578.0 29 28532.0 30 31515.0 31 37331.0 32 47979.0 33 66750.0 34 88067.0 35 111161.0 36 138359.0 37 214473.0 38 205486.0 39 127506.0 40 9.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.638563113367724 18.898182881044008 23.326372959961525 20.136881045626744 2 37.09487671718673 22.039176187588406 24.59089926458622 16.275047830638652 3 29.126450201483784 21.671752678151417 33.133860205799266 16.067936914565532 4 25.752841702649288 24.09652113575805 32.752834415713224 17.39780274587944 5 20.710120015836942 35.340425411327296 28.08984306368701 15.859611509148749 6 24.639235940464115 31.823345238027766 30.208965036471113 13.328453785037006 7 45.654921475167335 42.24908852574758 9.350515388794474 2.745474610290611 8 79.43132750972198 3.5553770706031234 13.926144474033004 3.087150945641886 9 73.74743641541042 5.757084318756492 15.720269098452174 4.775210167380921 10 39.11222448297165 23.81969853135852 22.770703602256358 14.297373383413476 11 28.73028377758004 23.81986046327101 29.799358263830804 17.65049749531814 12 25.587023424260803 21.50334348916311 33.72134918430847 19.188283902267614 13 23.253503599341585 20.67473789295815 35.9474271852914 20.124331322408867 14 19.478627821359954 23.3000590241821 36.754171973310385 20.467141181147564 15 19.494416182827607 23.06185718091114 37.435014699369354 20.008711936891896 16 23.453003715527732 22.863085758331195 34.769453487891944 18.91445703824913 17 23.89588749618448 22.62885124691621 33.170618749934214 20.304642506965095 18 23.752415821719442 22.856932345656624 33.80255803842159 19.58809379420235 19 23.43721535406008 24.25173287387852 32.20898608761974 20.102065684441666 20 24.18639334718931 25.332790321653455 31.413414601562483 19.067401729594756 21 23.735412970908122 23.859614747787 33.63568720260192 18.769285078702957 22 23.698249596991953 21.91780821917808 33.58735052672403 20.796591657105935 23 21.941288346488953 23.118857214107184 33.672040916955645 21.26781352244822 24 21.152598966712468 23.216178293512925 34.38761803824346 21.243604701531147 25 22.82802749927738 24.026404617650414 32.43901036931002 20.70655751376219 26 21.386752512171206 24.450666228370956 32.17360396474094 21.98897729471689 27 20.868327494338455 23.797675791260048 33.70191735480982 21.63207935959167 28 20.44916673886131 23.737113255989254 33.217740936468445 22.59597906868099 29 21.595563713325458 23.315604487781023 33.47294563055072 21.615886168342797 30 21.996992924385083 22.713298739279093 33.35837880246493 21.931329533870894 31 22.142164883931255 22.989635547941155 33.09540137658319 21.7727981915444 32 23.019350053882846 22.682612641862477 32.56604595465745 21.731991349597234 33 22.58415803906931 22.972551731173592 32.604828647698504 21.838461582058592 34 20.59611994944486 23.575748105194208 33.96594733812274 21.862184607238195 35 20.812946780267303 24.481838121525044 32.8741214181673 21.831093680040354 36 22.147832500868358 24.81930422715161 31.203388911064568 21.829474360915466 37 21.6784728525197 24.992004611820867 30.8341841505902 22.495338385069232 38 21.46707074076563 25.13231861399238 31.315688692375517 22.08492195286648 39 21.43063606045566 24.44297446252774 30.48967400677037 23.636715470246227 40 22.76697916826912 23.791684310497967 31.49017032808215 21.951166193150765 41 21.07535744445533 24.369052544476624 31.1337581886944 23.421831822373644 42 21.373959891084596 24.753074074943708 30.97077371877447 22.90219231519723 43 21.63369867871656 24.3046036433061 30.9983831098538 23.06331456812354 44 21.90218178962292 24.474794083331783 30.826249486878254 22.79677464016705 45 21.10126655045353 24.474308287594315 30.502466627856982 23.921958534095168 46 21.52067020379941 24.536975937727465 30.470647007052943 23.471706851420183 47 21.004593198697744 24.479328176881467 31.78456254498671 22.73151607943408 48 21.28028227970985 24.207687393681578 31.351880474816753 23.160149851791818 49 21.656531078377476 24.021951490056974 31.40175550386329 22.919761927702258 50 20.48908295528979 24.53770463133366 32.154576965023516 22.81863544835303 51 20.617009166155906 24.22768598487394 31.403779652769398 23.751525196200753 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 807.0 1 1497.0 2 2187.0 3 22968.5 4 43750.0 5 29310.5 6 14871.0 7 12821.0 8 10771.0 9 10409.5 10 10048.0 11 9532.0 12 9016.0 13 8521.5 14 8027.0 15 7528.5 16 7030.0 17 6623.5 18 6217.0 19 6056.5 20 5896.0 21 6042.0 22 6188.0 23 6471.0 24 6754.0 25 7890.0 26 10367.5 27 11709.0 28 13341.5 29 14974.0 30 17064.0 31 19154.0 32 22560.0 33 25966.0 34 29382.0 35 32798.0 36 35797.5 37 38797.0 38 40954.5 39 43112.0 40 47115.5 41 51119.0 42 54978.0 43 58837.0 44 65400.5 45 71964.0 46 80170.0 47 88376.0 48 90537.5 49 92699.0 50 89814.5 51 86930.0 52 81076.5 53 75223.0 54 71413.0 55 67603.0 56 65662.5 57 63722.0 58 61268.5 59 58815.0 60 54845.5 61 50876.0 62 46237.5 63 41599.0 64 36744.5 65 31890.0 66 27725.0 67 23560.0 68 20328.5 69 17097.0 70 14120.0 71 11143.0 72 9052.0 73 6961.0 74 5562.5 75 3376.5 76 2589.0 77 1964.5 78 1340.0 79 1067.5 80 795.0 81 565.5 82 336.0 83 257.5 84 179.0 85 126.0 86 73.0 87 63.0 88 53.0 89 38.0 90 23.0 91 17.0 92 11.0 93 8.5 94 6.0 95 5.5 96 5.0 97 3.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1235087.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.759942629040346 #Duplication Level Percentage of deduplicated Percentage of total 1 71.72967055595927 26.367785744370277 2 7.658409266787738 5.6304537055365635 3 3.6131845138004723 3.984613663063271 4 2.4631053784241423 3.6217444960060874 5 1.9497443907122793 3.5836245971938303 6 1.7095437528323543 3.7705638165571003 7 1.4309232590932353 3.682045983757873 8 1.3223919762203133 3.88888425431696 9 1.177769507364834 3.8965265568867964 >10 6.906094894967809 37.517296749408565 >50 0.023731601394101312 0.5764067402243586 >100 0.013127783033736797 0.9002168540147724 >500 0.0016121835867735337 0.38809307129278753 >1k 2.3031194096764768E-4 0.1253005553039541 >5k 2.3031194096764768E-4 0.7650953501904278 >10k+ 2.3031194096764768E-4 1.3013478618764043 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15371 1.2445277134323331 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9037 0.7316893465804433 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1480 0.11982961524167933 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.096595624437793E-5 0.0 0.0 0.03279121227897306 0.0 2 8.096595624437793E-5 0.0 0.0 0.13764212561544248 0.0 3 8.096595624437793E-5 0.0 0.0 0.29835954876053267 0.0 4 8.096595624437793E-5 0.0 0.0 0.3751962412364473 0.0 5 8.096595624437793E-5 0.0 0.0 0.6505614584235766 0.0 6 8.096595624437793E-5 0.0 0.0 1.117896957866126 0.0 7 8.096595624437793E-5 0.0 0.0 1.4929312671900845 0.0 8 1.6193191248875587E-4 0.0 0.0 2.290203038328474 0.0 9 1.6193191248875587E-4 0.0 0.0 2.8224732346790145 0.0 10 2.4289786873313377E-4 0.0 0.0 3.4844508929330487 0.0 11 2.4289786873313377E-4 0.0 0.0 4.091047837115928 0.0 12 2.4289786873313377E-4 0.0 0.0 4.511423081936738 0.0 13 2.4289786873313377E-4 0.0 0.0 4.753268393238695 0.0 14 2.4289786873313377E-4 0.0 0.0 4.942161969156829 0.0 15 2.4289786873313377E-4 0.0 0.0 5.096968877496079 0.0 16 2.4289786873313377E-4 0.0 0.0 5.300031495756979 0.0 17 2.4289786873313377E-4 0.0 0.0 5.528922254059835 0.0 18 2.4289786873313377E-4 0.002267046774842582 0.0 5.796514739447504 0.0 19 2.4289786873313377E-4 0.002267046774842582 0.0 5.986056043015593 0.0 20 2.4289786873313377E-4 0.002267046774842582 0.0 6.185637125157985 0.0 21 2.4289786873313377E-4 0.002267046774842582 0.0 6.4265108449850095 0.0 22 2.4289786873313377E-4 0.002267046774842582 0.0 6.680986845461089 0.0 23 2.4289786873313377E-4 0.002267046774842582 0.0 6.928418807743908 0.0 24 2.4289786873313377E-4 0.002267046774842582 0.0 7.151803881022147 0.0 25 2.4289786873313377E-4 0.002267046774842582 0.0 7.3542997375893355 0.0 26 2.4289786873313377E-4 0.002267046774842582 0.0 7.546674849625978 0.0 27 2.4289786873313377E-4 0.002267046774842582 0.0 7.7735414590227245 0.0 28 2.4289786873313377E-4 0.002267046774842582 0.0 7.979275953839689 0.0 29 2.4289786873313377E-4 0.002267046774842582 0.0 8.20565676749897 0.0 30 2.4289786873313377E-4 0.002267046774842582 0.0 8.477378516655103 0.0 31 2.4289786873313377E-4 0.002267046774842582 0.0 8.696958189989855 0.0 32 2.4289786873313377E-4 0.002267046774842582 0.0 8.934512305610859 0.0 33 3.2386382497751173E-4 0.002267046774842582 0.0 9.151905898127014 0.0 34 3.2386382497751173E-4 0.002267046774842582 0.0 9.376100630967697 0.0 35 3.2386382497751173E-4 0.002267046774842582 0.0 9.617945942269653 0.0 36 3.2386382497751173E-4 0.002267046774842582 0.0 9.841331015547892 0.0 37 3.2386382497751173E-4 0.002267046774842582 0.0 10.083905020456049 0.0 38 3.2386382497751173E-4 0.002267046774842582 0.0 10.37206285872979 0.0 39 3.2386382497751173E-4 0.002267046774842582 0.0 10.814460843649071 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCGCAA 20 7.033491E-4 45.0 1 CGTTTTA 3270 0.0 44.17431 1 CGTTTTT 5630 0.0 43.441383 1 CGTTATT 1300 0.0 42.05769 1 GCGATCA 75 0.0 42.0 9 GTTTTAT 3730 0.0 40.294907 2 CGAGGTA 35 6.248669E-6 38.571426 5 ATAACGC 35 6.248669E-6 38.571426 11 AGGCGAT 540 0.0 38.333332 7 CGGTCTA 105 0.0 36.42857 31 TATGGGC 285 0.0 36.31579 4 TGCGATA 25 0.0021071692 36.0 1 ATAACGG 100 0.0 36.0 2 TCACGAC 115 0.0 35.217392 25 TATACGG 115 0.0 35.217392 2 GTTATTT 1610 0.0 34.518635 2 CGGTTTT 625 0.0 34.199997 1 CGCATCG 40 1.5606609E-5 33.75 21 TAAGGCG 100 0.0 33.75 5 TACGTAG 40 1.5606609E-5 33.75 1 >>END_MODULE