SRR2934574.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934574.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	46678
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	378	0.8098033334761559	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	234	0.5013068254852393	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	68	0.14567890655126614	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	53	0.11354385363554564	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGCCG	51	0.10925917991344959	No Hit
GATACTAAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	49	0.10497450619135353	No Hit
GAATGAAACCTGTCTCTTATACACATCTGACGCTTACGCGTTCGTATGCCG	49	0.10497450619135353	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATAGAGG	30	2.1208907E-6	45.000004	3
CCTATGC	20	6.9638406E-4	45.0	35
TATACTG	20	6.9638406E-4	45.0	18
TACAGGA	20	6.9638406E-4	45.0	4
AGCTACG	20	6.9638406E-4	45.0	9
TGATTCA	20	6.9638406E-4	45.0	44
CGAAGGA	20	6.9638406E-4	45.0	4
CACGACG	20	6.9638406E-4	45.0	26
GCTACGA	20	6.9638406E-4	45.0	10
TCACGAC	20	6.9638406E-4	45.0	25
AACTAAC	20	6.9638406E-4	45.0	13
CGAATAT	20	6.9638406E-4	45.0	14
GTCTCAC	20	6.9638406E-4	45.0	22
AAAGGAT	20	6.9638406E-4	45.0	5
TACGAAT	20	6.9638406E-4	45.0	12
ACGGGAG	20	6.9638406E-4	45.0	5
CTAAAGC	20	6.9638406E-4	45.0	5
CGACGGT	20	6.9638406E-4	45.0	28
CTACGAA	20	6.9638406E-4	45.0	11
ACAAGCG	40	6.5756467E-9	45.0	14