##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934573.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 461107 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.09280058641487 33.0 31.0 34.0 30.0 34.0 2 32.29494021994895 33.0 31.0 34.0 30.0 34.0 3 32.13410770168312 33.0 31.0 34.0 30.0 34.0 4 35.90746182556327 37.0 35.0 37.0 35.0 37.0 5 32.159832750316085 37.0 35.0 37.0 0.0 37.0 6 34.0413353082907 37.0 35.0 37.0 19.0 37.0 7 20.561156087415718 32.0 0.0 37.0 0.0 37.0 8 27.99786817376444 35.0 17.0 37.0 17.0 37.0 9 34.90775459925787 37.0 32.0 39.0 32.0 39.0 10 36.35087517647748 37.0 35.0 39.0 32.0 39.0 11 36.76912950790164 38.0 37.0 39.0 33.0 39.0 12 37.09550928526351 39.0 37.0 39.0 34.0 39.0 13 36.89035950441004 39.0 37.0 39.0 33.0 39.0 14 38.267608169036684 40.0 38.0 41.0 34.0 41.0 15 38.45425898977894 40.0 38.0 41.0 34.0 41.0 16 38.53724840438336 40.0 38.0 41.0 34.0 41.0 17 38.51526869034736 40.0 38.0 41.0 34.0 41.0 18 38.40128863799509 40.0 38.0 41.0 34.0 41.0 19 38.34766117191888 40.0 37.0 41.0 34.0 41.0 20 38.31037481538992 40.0 37.0 41.0 34.0 41.0 21 38.231688089749234 40.0 37.0 41.0 34.0 41.0 22 38.211642850791684 40.0 37.0 41.0 34.0 41.0 23 38.13885063553579 40.0 37.0 41.0 34.0 41.0 24 38.025672999976145 40.0 36.0 41.0 34.0 41.0 25 37.87258488810623 40.0 36.0 41.0 33.0 41.0 26 37.74152203284704 40.0 36.0 41.0 33.0 41.0 27 37.69420980379825 40.0 36.0 41.0 33.0 41.0 28 37.606210705974966 40.0 36.0 41.0 33.0 41.0 29 37.5756191079294 40.0 36.0 41.0 33.0 41.0 30 37.41251162962176 40.0 36.0 41.0 33.0 41.0 31 37.29523299364356 40.0 35.0 41.0 32.0 41.0 32 37.21457709381987 40.0 35.0 41.0 32.0 41.0 33 37.03813865328438 40.0 35.0 41.0 31.0 41.0 34 36.87426562598269 39.0 35.0 41.0 31.0 41.0 35 36.70915427438751 39.0 35.0 41.0 31.0 41.0 36 36.538180942818045 39.0 35.0 41.0 30.0 41.0 37 36.480495850203965 39.0 35.0 41.0 30.0 41.0 38 36.343698967918506 39.0 35.0 41.0 30.0 41.0 39 36.255404927706586 39.0 35.0 41.0 30.0 41.0 40 36.136606037210456 39.0 35.0 41.0 29.0 41.0 41 35.99927782488663 39.0 35.0 40.0 29.0 41.0 42 35.876085160277334 39.0 35.0 40.0 28.0 41.0 43 35.79905748557276 39.0 35.0 40.0 28.0 41.0 44 35.664982314300154 38.0 35.0 40.0 27.0 41.0 45 35.58046830778973 38.0 35.0 40.0 27.0 41.0 46 35.46559692218943 38.0 34.0 40.0 27.0 41.0 47 35.43277156928869 38.0 34.0 40.0 27.0 41.0 48 35.31647318301392 38.0 34.0 40.0 26.0 41.0 49 35.20842884623309 38.0 34.0 40.0 26.0 41.0 50 35.05410674745775 38.0 34.0 40.0 26.0 41.0 51 33.277278375734916 36.0 31.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 23.0 9 21.0 10 22.0 11 19.0 12 15.0 13 15.0 14 23.0 15 39.0 16 55.0 17 97.0 18 155.0 19 291.0 20 499.0 21 800.0 22 1378.0 23 2121.0 24 3034.0 25 4292.0 26 5078.0 27 5625.0 28 6170.0 29 7051.0 30 8552.0 31 10985.0 32 15201.0 33 22684.0 34 31719.0 35 41311.0 36 54072.0 37 89719.0 38 91706.0 39 58322.0 40 9.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.28804594161442 19.97952752831772 25.977267749134146 13.75515878093371 2 31.728644327672317 23.62943958777464 27.462389423712935 17.179526660840107 3 31.685270446989527 23.14148343009323 29.28842980045846 15.884816322458779 4 27.223833079957583 26.317752712494062 28.17003428705268 18.288379920495675 5 22.51342963780641 37.541828686183464 23.600162218313752 16.34457945769637 6 26.675587228127096 35.09424059925353 24.827209302829928 13.402962869789443 7 49.162558798717 43.55106298538083 4.803874155022587 2.4825040608795788 8 87.16545183655853 3.742515294714676 6.878013129273683 2.2140197394530987 9 82.19957623718574 6.031571847749004 8.408243639762572 3.3606082753026953 10 43.55995463092081 28.458470593593244 15.423318231993877 12.558256543492075 11 32.30660128777052 26.402331779825506 24.196553077702138 17.094513854701837 12 29.316405953498865 23.256207344499217 27.996321894918097 19.43106480708382 13 25.470227083952313 24.218240018043534 29.21859785255917 21.09293504544498 14 22.17034224160553 25.38890105767208 29.901953342716546 22.538803358005843 15 21.320864788433052 25.18612816548003 32.82470229252647 20.668304753560456 16 25.87815843177397 23.39999175896267 29.711542006519092 21.010307802744265 17 26.156401876354078 22.923963418469032 28.54109783629396 22.37853686888293 18 25.82676038316486 24.194167514264585 29.417683964893182 20.561388137677373 19 25.595143860318753 25.810928916715643 27.202796747826426 21.391130475139175 20 26.51401952258369 25.511866009407797 27.790946569885083 20.18316789812343 21 26.275246309424926 25.834567681687766 28.12232301830161 19.767862990585698 22 26.857540657591407 22.613189563376828 29.038162508918752 21.491107270113012 23 24.23558957031665 24.820486351324096 29.190838568922178 21.753085509437074 24 23.801417024681907 24.40388022736588 30.75511757574706 21.03958517220515 25 23.977298110850626 25.677554233616057 28.470398410781012 21.874749244752305 26 23.621849158655152 25.810495177908816 27.69942768164439 22.868227981791645 27 22.344271503143524 26.148377708427763 28.81175085175458 22.695599936674135 28 21.745711949721 26.23100495112848 29.26045364741806 22.76282945173246 29 23.183989833162368 25.107404572040764 29.240067923497147 22.46853767129972 30 23.126953180064497 25.890086248961737 29.674891077342135 21.308069493631628 31 24.821570698341166 26.195221499565175 27.806994905737714 21.176212896355942 32 25.612276543188457 25.405383132331544 27.525932158913225 21.456408165566778 33 25.053187221187272 25.632011658899128 27.590776110533998 21.724025009379602 34 23.423413654531377 25.765603211402127 29.02211417306612 21.788868961000375 35 23.759561229823014 26.734792575259103 28.366951705352555 21.138694489565328 36 24.6775694144743 27.34441246825574 27.00631306833338 20.97170504893658 37 23.602330912347895 28.09217817122707 26.92628825847363 21.379202657951407 38 23.676283378912053 27.41597937138235 27.373689837716626 21.534047411988976 39 23.941297789883908 26.68122583261586 27.218194475468817 22.159281902031417 40 25.13017585939923 25.359406818807784 27.591860457551064 21.91855686424192 41 22.660033354514244 25.61618019244991 28.337891205295087 23.385895247740763 42 22.685190205310267 25.13342890045044 27.935815331365603 24.245565562873693 43 22.820082974233745 26.160088656212118 28.129262839210856 22.89056553034328 44 22.418440839111096 25.400828874859847 28.338108074698496 23.842622211330557 45 22.604731656643686 26.823709030658826 27.44959412891151 23.121965183785974 46 22.669792477667876 26.7781664559419 27.490582446156747 23.061458620233484 47 22.112438110894 26.224281999622644 29.47146757693984 22.19181231254351 48 22.280945637346647 25.87056800265448 29.753831540184816 22.094654819814057 49 23.251869956430937 25.635915308160577 29.147247818835975 21.96496691657251 50 22.02634095773866 26.386066574569462 29.488817129212958 22.09877533847892 51 21.805784774466662 26.301704376641432 28.292565499981563 23.59994534891034 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 272.0 1 702.5 2 1133.0 3 3530.0 4 5927.0 5 3986.5 6 2046.0 7 1802.5 8 1559.0 9 1519.5 10 1480.0 11 1457.0 12 1434.0 13 1411.5 14 1389.0 15 1369.0 16 1349.0 17 1293.0 18 1237.0 19 1300.5 20 1364.0 21 1546.5 22 1729.0 23 2010.5 24 2292.0 25 2871.5 26 4168.5 27 4886.0 28 5897.0 29 6908.0 30 8163.5 31 9419.0 32 10377.0 33 11335.0 34 13066.0 35 14797.0 36 15914.0 37 17031.0 38 18302.0 39 19573.0 40 21016.0 41 22459.0 42 23635.0 43 24811.0 44 25959.5 45 27108.0 46 28049.5 47 28991.0 48 29459.5 49 29928.0 50 29941.0 51 29954.0 52 29388.0 53 28822.0 54 27753.5 55 26685.0 56 25997.0 57 25309.0 58 24689.0 59 24069.0 60 22674.0 61 21279.0 62 19647.5 63 18016.0 64 16147.5 65 14279.0 66 12158.0 67 10037.0 68 8465.0 69 6893.0 70 5755.5 71 4618.0 72 3795.5 73 2973.0 74 2402.5 75 1471.5 76 1111.0 77 859.5 78 608.0 79 457.0 80 306.0 81 239.5 82 173.0 83 142.5 84 112.0 85 82.5 86 53.0 87 47.5 88 42.0 89 26.0 90 10.0 91 10.5 92 11.0 93 7.5 94 4.0 95 3.5 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 461107.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.51755424460355 #Duplication Level Percentage of deduplicated Percentage of total 1 63.41946096166099 21.890846839076506 2 8.90732753711869 6.149183228738908 3 5.287681125446951 5.475534602273445 4 3.9709371083283194 5.482681481545278 5 3.0496032663518577 5.263242308541021 6 2.704575222090459 5.601319316227088 7 2.1818958825545676 5.271959663750811 8 1.9055708670323044 5.262051661577904 9 1.5759740562223055 4.895889297636717 >10 6.975911859998964 33.23013411103694 >50 0.014041408796392041 0.32495261702507755 >100 0.0057442126894331055 0.47850649774811405 >500 0.0 0.0 >1k 0.0012764917087629123 0.6736983748221607 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1903 0.4127024746967623 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1155 0.25048416094312165 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0075904291194885355 0.0 2 0.0 0.0 0.0 0.03491597394964726 0.0 3 0.0 0.0 0.0 0.048795615768140586 0.0 4 0.0 0.0 0.0 0.06809699267198285 0.0 5 0.0 0.0 0.0 0.13033851145178885 0.0 6 0.0 0.0 0.0 0.17674856378237588 0.0 7 0.0 0.0 0.0 0.22814661239148398 0.0 8 0.0 0.0 0.0 0.35631642980913325 0.0 9 2.1686940341395815E-4 0.0 0.0 0.41378682171383213 0.0 10 2.1686940341395815E-4 0.0 0.0 0.5671134899275005 0.0 11 2.1686940341395815E-4 0.0 0.0 0.7158859006694759 0.0 12 2.1686940341395815E-4 0.0 0.0 0.8642245726046233 0.0 13 2.1686940341395815E-4 0.0 0.0 0.9255986137707733 0.0 14 2.1686940341395815E-4 0.0 0.0 0.9516229421804484 0.0 15 2.1686940341395815E-4 0.0 0.0 1.0088764646817332 0.0 16 2.1686940341395815E-4 0.0 0.0 1.0889012745414839 0.0 17 2.1686940341395815E-4 0.0 0.0 1.1819382486060719 0.0 18 2.1686940341395815E-4 0.0 0.0 1.2866861704550137 0.0 19 2.1686940341395815E-4 0.0 0.0 1.352831338496271 0.0 20 4.337388068279163E-4 0.0 0.0 1.430687454321882 0.0 21 4.337388068279163E-4 0.0 0.0 1.5102785253748046 0.0 22 4.337388068279163E-4 0.0 0.0 1.6102553203486392 0.0 23 4.337388068279163E-4 0.0 0.0 1.7271479287887628 0.0 24 4.337388068279163E-4 0.0 0.0 1.808473955068997 0.0 25 4.337388068279163E-4 0.0 0.0 1.9038964925711386 0.0 26 4.337388068279163E-4 0.0 0.0 1.9871743434820985 0.0 27 4.337388068279163E-4 0.0 0.0 2.077175145898891 0.0 28 4.337388068279163E-4 0.0 0.0 2.1678265565259256 0.0 29 4.337388068279163E-4 0.0 0.0 2.2530562320676113 0.0 30 4.337388068279163E-4 0.0 0.0 2.3649608442292136 0.0 31 4.337388068279163E-4 0.0 0.0 2.472961807129365 0.0 32 6.506082102418745E-4 0.0 0.0 2.589854415569488 0.0 33 6.506082102418745E-4 0.0 0.0 2.6928673821911184 0.0 34 6.506082102418745E-4 0.0 0.0 2.813446770489279 0.0 35 6.506082102418745E-4 0.0 0.0 2.927303207281607 0.0 36 6.506082102418745E-4 0.0 0.0 3.04636450975587 0.0 37 6.506082102418745E-4 0.0 0.0 3.1678113756676867 0.0 38 6.506082102418745E-4 0.0 0.0 3.3189693498472157 0.0 39 6.506082102418745E-4 0.0 0.0 3.5464653540284576 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGATCGT 25 3.8871593E-5 45.0 28 GTCATAC 20 7.028888E-4 45.0 39 CGACGGT 20 7.028888E-4 45.0 28 TGTAGCG 20 7.028888E-4 45.0 1 CGTTTAG 25 3.8871593E-5 45.0 2 CGTTTTA 285 0.0 43.421055 1 CGTTATT 115 0.0 41.08696 1 GCATTAG 215 0.0 39.76744 16 AGGCGAT 245 0.0 39.489796 7 TTGTACG 40 3.4522236E-7 39.375 1 CGTTTTT 755 0.0 39.039734 1 CATTAGA 215 0.0 38.720932 17 CGTATAG 35 6.2401523E-6 38.571426 2 CTAACGG 35 6.2401523E-6 38.571426 2 AATAGGC 35 6.2401523E-6 38.571426 4 TAGGCGA 65 9.094947E-12 38.07692 6 ACGCCTC 30 1.13886206E-4 37.499996 22 ATAGGAT 195 0.0 36.923077 5 TGCATTA 240 0.0 36.5625 15 TTGACCC 235 0.0 36.38298 8 >>END_MODULE