SRR2934571.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934571.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	316763
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	985	0.310958034871497	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	564	0.17805109813961859	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	465	0.14679744793426	No Hit
GATACTAAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	324	0.10228467339935535	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGCACT	25	3.8843857E-5	45.000004	21
ATAACGG	25	3.8843857E-5	45.000004	2
TATGGGT	20	7.02554E-4	45.0	4
CCTCGTG	20	7.02554E-4	45.0	15
TAGTTCG	20	7.02554E-4	45.0	20
TAGTTAG	40	6.7884685E-9	45.0	2
CACCTCG	20	7.02554E-4	45.0	34
AATGCGT	20	7.02554E-4	45.0	41
TCTCGCC	20	7.02554E-4	45.0	16
CAACTCC	20	7.02554E-4	45.0	35
GCGCTAA	20	7.02554E-4	45.0	1
ATTCTCG	20	7.02554E-4	45.0	13
CGTTATT	135	0.0	41.666664	1
CGTTTTA	190	0.0	41.447372	1
GGATTCC	105	0.0	40.714287	8
AAGGCGA	140	0.0	40.17857	6
CTCGTCC	45	1.920671E-8	40.000004	37
TAACGGG	80	0.0	39.375	3
ATGGGAC	110	0.0	38.863632	5
CTACGAA	110	0.0	38.863632	11