##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934571.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 316763 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.053702610469024 33.0 31.0 34.0 30.0 34.0 2 32.24333018692209 33.0 31.0 34.0 30.0 34.0 3 32.12426325044276 33.0 31.0 34.0 30.0 34.0 4 35.87385521667619 37.0 35.0 37.0 35.0 37.0 5 32.1440004040876 37.0 35.0 37.0 0.0 37.0 6 34.01791875945107 37.0 35.0 37.0 19.0 37.0 7 20.71965160072357 32.0 0.0 37.0 0.0 37.0 8 28.0621916069743 35.0 17.0 37.0 17.0 37.0 9 34.8548630995413 37.0 32.0 39.0 32.0 39.0 10 36.333631137475024 37.0 35.0 39.0 32.0 39.0 11 36.763132057721386 39.0 37.0 39.0 33.0 39.0 12 37.080987994178614 39.0 37.0 39.0 34.0 39.0 13 36.84968888411841 39.0 37.0 39.0 33.0 39.0 14 38.25774790616328 40.0 38.0 41.0 34.0 41.0 15 38.43532862108264 40.0 38.0 41.0 34.0 41.0 16 38.50876207132777 40.0 38.0 41.0 34.0 41.0 17 38.49751707112257 40.0 38.0 41.0 34.0 41.0 18 38.3990238758946 40.0 38.0 41.0 34.0 41.0 19 38.36499528038313 40.0 37.0 41.0 34.0 41.0 20 38.34961153922649 40.0 37.0 41.0 34.0 41.0 21 38.26689354501631 40.0 37.0 41.0 34.0 41.0 22 38.21909440180829 40.0 37.0 41.0 34.0 41.0 23 38.167544820575635 40.0 37.0 41.0 34.0 41.0 24 38.03466313931867 40.0 37.0 41.0 34.0 41.0 25 37.88582631178515 40.0 36.0 41.0 33.0 41.0 26 37.75249003197975 40.0 36.0 41.0 33.0 41.0 27 37.68733090670312 40.0 36.0 41.0 33.0 41.0 28 37.62107948213649 40.0 36.0 41.0 33.0 41.0 29 37.57879550326269 40.0 36.0 41.0 33.0 41.0 30 37.425545281488056 40.0 36.0 41.0 33.0 41.0 31 37.337451028055675 40.0 36.0 41.0 33.0 41.0 32 37.214406354277486 40.0 35.0 41.0 32.0 41.0 33 37.076704034246426 40.0 35.0 41.0 32.0 41.0 34 36.93678870322607 39.0 35.0 41.0 31.0 41.0 35 36.79109302538491 39.0 35.0 41.0 31.0 41.0 36 36.61916953684616 39.0 35.0 41.0 30.0 41.0 37 36.52795623226198 39.0 35.0 41.0 30.0 41.0 38 36.4275941318904 39.0 35.0 41.0 30.0 41.0 39 36.35131628378314 39.0 35.0 41.0 30.0 41.0 40 36.21918910983922 39.0 35.0 41.0 30.0 41.0 41 36.09639699081016 39.0 35.0 40.0 29.0 41.0 42 35.99874354012306 39.0 35.0 40.0 29.0 41.0 43 35.91221828306968 39.0 35.0 40.0 28.0 41.0 44 35.75715913790437 39.0 35.0 40.0 28.0 41.0 45 35.701445560245354 39.0 35.0 40.0 27.0 41.0 46 35.52794991839325 38.0 35.0 40.0 27.0 41.0 47 35.491667271745754 38.0 35.0 40.0 27.0 41.0 48 35.37581409444916 38.0 34.0 40.0 26.0 41.0 49 35.24315339859769 38.0 34.0 40.0 26.0 41.0 50 35.10910049469162 38.0 34.0 40.0 26.0 41.0 51 33.287208417649786 36.0 32.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 11.0 9 11.0 10 19.0 11 11.0 12 9.0 13 15.0 14 10.0 15 13.0 16 28.0 17 64.0 18 117.0 19 198.0 20 368.0 21 562.0 22 893.0 23 1383.0 24 2130.0 25 2695.0 26 3466.0 27 3885.0 28 4307.0 29 5022.0 30 6097.0 31 7860.0 32 10364.0 33 15358.0 34 21381.0 35 27697.0 36 35667.0 37 61022.0 38 64196.0 39 41899.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.89461206012066 19.540476633950306 26.06933259250607 13.49557871342297 2 31.693411162288527 25.937688429519863 26.147624564737676 16.221275843453938 3 31.60785824101931 23.980704817166146 28.54531621433059 15.866120727483954 4 28.647285194293527 25.742589885813683 27.634224956828923 17.975899963063867 5 22.980588010594673 38.35012296259349 22.479898220436098 16.189390806375744 6 27.789546127546462 36.5055262136045 22.822425598949373 12.882502059899673 7 49.174619510485755 43.35481101012429 4.819060306917159 2.651509172472795 8 85.37392309076502 5.548312145042193 6.626720923845272 2.4510438403475154 9 78.29923318064294 9.130169874638137 8.47068628596143 4.099910658757494 10 40.35982737882897 33.957248794840304 14.085925439524186 11.59699838680654 11 33.5803108317575 25.6219949931021 24.767728554155628 16.029965620984772 12 31.421914806969248 23.27134166553543 26.952327134166552 18.354416393328766 13 24.864330745699466 26.39765376638054 28.67443482982545 20.063580658094537 14 20.355597086780968 28.75241110862064 29.433361850973753 21.458629953624634 15 19.980237590880247 27.218456701066728 32.90662103844199 19.894684669611035 16 23.530525976834415 25.31008987792135 31.63627065029691 19.523113494947328 17 22.490316103837884 25.0177577557985 29.27898776056547 23.212938379798146 18 22.811060635238334 26.191190258963324 29.12903337826703 21.86871572753131 19 24.93473038202063 26.94853881292954 27.318847213847576 20.797883591202254 20 26.718082604344573 25.736907403958163 28.385575335503198 19.159434656194062 21 25.817409230244692 26.368925663666527 27.668635541398455 20.14502956469032 22 24.774673809756823 25.90580339244167 27.475746851747207 21.843775946054304 23 24.24178328908364 26.40838734321875 27.990327153108158 21.359502214589458 24 22.522832527788914 25.195493160501698 30.57490931706039 21.706764994648996 25 22.10011901642553 27.899091749983423 28.290235917705036 21.71055331588601 26 22.61690917184141 29.22216294201027 26.39765376638054 21.763274119767775 27 22.00667375924587 28.834807095525676 28.177533360903894 20.980985784324556 28 21.446317909604343 28.3625297146447 29.94794215233471 20.243210223416245 29 21.599429226266956 26.524562527820482 30.037599088277357 21.8384091576352 30 22.256071574015905 27.33115925786787 28.9667669519483 21.446002216167923 31 24.385739496090135 27.503843567588387 27.06124136973068 21.049175566590794 32 24.755732203571757 28.006111824929047 27.28885633738789 19.949299634111306 33 23.984808831839576 28.454712198078692 26.125841717624848 21.434637252456884 34 22.210927412608164 28.724945779652295 27.842898318301064 21.221228489438477 35 24.753206656080415 25.976834415635665 27.734299776173355 21.53565915211057 36 23.99301686118644 28.500172052922846 26.53655887840436 20.970252207486354 37 23.07813728244776 29.621199445642326 27.868469486650906 19.43219378525901 38 22.680679245997794 27.820484084315407 27.122485896395727 22.376350773291072 39 23.694370870335234 27.165735897184963 27.37882896676695 21.76106426571285 40 23.648595322054657 27.107016918011258 28.98539286469695 20.258994895237134 41 20.792201109346735 27.238976774433883 29.5372249915552 22.431597124664183 42 21.97857704340469 27.532887363738823 27.81795853682406 22.67057705603243 43 23.34205699529301 26.62400596029208 29.15681440067179 20.877122643743114 44 21.662883606986927 28.695270596629026 27.8009110912575 21.840934705126546 45 21.912912808629795 29.173861846238353 26.412491357892176 22.50073398723967 46 21.486410976029397 30.111155658962694 26.724080779636513 21.678352585371396 47 22.593547857546493 27.966018758503992 28.327172049765913 21.1132613341836 48 22.752973042937462 27.12943115199692 28.711055268449915 21.406540536615704 49 21.316252213800226 27.558774225525077 28.195212193343288 22.929761367331412 50 21.453263165205534 28.22678153698506 28.016214014894413 22.303741282914988 51 21.904704779282934 27.506053421643312 26.991473120282354 23.5977686787914 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 281.0 1 717.5 2 1154.0 3 2251.0 4 3348.0 5 2360.0 6 1372.0 7 1205.0 8 1038.0 9 1057.5 10 1077.0 11 1097.0 12 1117.0 13 1038.5 14 960.0 15 1004.0 16 1048.0 17 1054.5 18 1061.0 19 1184.5 20 1308.0 21 1475.5 22 1643.0 23 1798.5 24 1954.0 25 2406.0 26 3496.5 27 4135.0 28 4791.5 29 5448.0 30 6607.0 31 7766.0 32 8845.0 33 9924.0 34 10671.5 35 11419.0 36 11830.0 37 12241.0 38 13021.0 39 13801.0 40 15594.0 41 17387.0 42 18642.5 43 19898.0 44 20464.0 45 21030.0 46 21387.0 47 21744.0 48 20980.5 49 20217.0 50 19318.0 51 18419.0 52 17862.0 53 17305.0 54 16963.0 55 16621.0 56 16451.0 57 16281.0 58 15639.5 59 14998.0 60 14484.5 61 13971.0 62 12395.5 63 10820.0 64 9032.5 65 7245.0 66 6282.0 67 5319.0 68 4515.0 69 3711.0 70 3104.5 71 2498.0 72 2139.5 73 1781.0 74 1441.5 75 848.0 76 594.0 77 494.5 78 395.0 79 311.0 80 227.0 81 178.5 82 130.0 83 97.5 84 65.0 85 47.0 86 29.0 87 19.0 88 9.0 89 6.0 90 3.0 91 4.5 92 6.0 93 4.0 94 2.0 95 1.5 96 1.0 97 1.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 316763.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.708484863060864 #Duplication Level Percentage of deduplicated Percentage of total 1 65.65599992072023 20.81852279655283 2 7.977999990366548 5.059405838640748 3 4.731999994286099 4.501336505724747 4 3.2720001154987646 4.15000664536904 5 2.549999998206927 4.042831817197479 6 2.0499999975389005 3.900143633474222 7 1.812999997810973 4.024123809112303 8 1.598999998069206 4.0561493787849425 9 1.5199999981645966 4.3377207240289195 >10 8.764999989416243 42.51473645305538 >50 0.03899999995290741 0.8929109326656021 >100 0.023999999971019946 1.2109470354580734 >500 0.0019999999975849956 0.4911644299357307 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 985 0.310958034871497 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 564 0.17805109813961859 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 465 0.14679744793426 No Hit GATACTAAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 324 0.10228467339935535 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.019257299621483568 0.0 2 0.0 0.0 0.0 0.08744708188772048 0.0 3 0.0 0.0 0.0 0.11143978305547049 0.0 4 0.0 0.0 0.0 0.15342701009903303 0.0 5 0.0 0.0 0.0 0.30780110050731935 0.0 6 0.0 0.0 0.0 0.38041059088340495 0.0 7 0.0 0.0 0.0 0.46438504497053 0.0 8 0.0 0.0 0.0 0.6717956326970006 0.0 9 0.0 0.0 0.0 0.7437737362002507 0.0 10 0.0 0.0 0.0 1.0231624274299713 0.0 11 0.0 0.0 0.0 1.2662463734716491 0.0 12 0.0 0.0 0.0 1.557315721848827 0.0 13 0.0 0.0 0.0 1.642868643118041 0.0 14 0.0 0.0 0.0 1.6807518554881726 0.0 15 0.0 0.0 0.0 1.742943462462472 0.0 16 0.0 0.0 0.0 1.8755347057579326 0.0 17 0.0 0.0 0.0 2.027067555238459 0.0 18 0.0 0.0 0.0 2.1880712078115185 0.0 19 0.0 0.0 0.0 2.2865675599738604 0.0 20 0.0 0.0 0.0 2.391693474300976 0.0 21 0.0 0.0 0.0 2.5400693894173245 0.0 22 0.0 0.0 0.0 2.691602238897851 0.0 23 0.0 0.0 0.0 2.8387153802685288 0.0 24 0.0 0.0 0.0 2.9738321710553315 0.0 25 0.0 0.0 0.0 3.0874818081657263 0.0 26 0.0 0.0 0.0 3.2008157518397033 0.0 27 0.0 0.0 0.0 3.3087829070945785 0.0 28 0.0 0.0 0.0 3.425589478569151 0.0 29 0.0 0.0 0.0 3.559127802173865 0.0 30 0.0 0.0 0.0 3.7008741551254407 0.0 31 0.0 0.0 0.0 3.8388321868400035 0.0 32 0.0 0.0 0.0 3.9761588316817305 0.0 33 0.0 0.0 0.0 4.112538396214204 0.0 34 0.0 0.0 0.0 4.256810296657123 0.0 35 0.0 0.0 0.0 4.404870518337053 0.0 36 0.0 0.0 0.0 4.578501908366823 0.0 37 0.0 0.0 0.0 4.740136947812718 0.0 38 0.0 0.0 0.0 4.898930746330853 0.0 39 0.0 0.0 0.0 5.070352282305699 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCACT 25 3.8843857E-5 45.000004 21 ATAACGG 25 3.8843857E-5 45.000004 2 TATGGGT 20 7.02554E-4 45.0 4 CCTCGTG 20 7.02554E-4 45.0 15 TAGTTCG 20 7.02554E-4 45.0 20 TAGTTAG 40 6.7884685E-9 45.0 2 CACCTCG 20 7.02554E-4 45.0 34 AATGCGT 20 7.02554E-4 45.0 41 TCTCGCC 20 7.02554E-4 45.0 16 CAACTCC 20 7.02554E-4 45.0 35 GCGCTAA 20 7.02554E-4 45.0 1 ATTCTCG 20 7.02554E-4 45.0 13 CGTTATT 135 0.0 41.666664 1 CGTTTTA 190 0.0 41.447372 1 GGATTCC 105 0.0 40.714287 8 AAGGCGA 140 0.0 40.17857 6 CTCGTCC 45 1.920671E-8 40.000004 37 TAACGGG 80 0.0 39.375 3 ATGGGAC 110 0.0 38.863632 5 CTACGAA 110 0.0 38.863632 11 >>END_MODULE