SRR2934570.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934570.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	912819
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12212	1.3378336778704212	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7017	0.768717566133045	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1241	0.1359524725055022	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGAACAT	20	7.0325215E-4	45.000004	18
ACGGGTA	65	0.0	44.999996	5
CGTTTTA	2525	0.0	44.10891	1
CGTTATT	1185	0.0	43.670887	1
CGTTTTT	4970	0.0	42.917507	1
CGACGGT	45	1.927583E-8	40.000004	28
TTAGCGA	45	1.927583E-8	40.000004	1
CGGTCTA	45	1.927583E-8	40.000004	31
ACGGTCT	45	1.927583E-8	40.000004	30
CGCTAGG	80	0.0	39.375004	3
ACTACGG	40	3.4571713E-7	39.375004	2
CGGTTTT	515	0.0	39.32039	1
TGCGACG	35	6.2468735E-6	38.57143	1
AGGCGAT	530	0.0	37.78302	7
GATCGTC	30	1.1397377E-4	37.500004	28
CGACGCG	90	0.0	37.500004	15
CGCATAG	30	1.1397377E-4	37.500004	2
GCGCAAA	30	1.1397377E-4	37.500004	1
TGTTACG	30	1.1397377E-4	37.500004	1
CGCAATC	90	0.0	37.500004	20