SRR2934569.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934569.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	239231
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	642	0.2683598697493218	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	423	0.17681654969464658	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACAGTAC	20	7.022075E-4	45.000004	36
CGCATAG	20	7.022075E-4	45.000004	2
TCAATAG	20	7.022075E-4	45.000004	2
TACGAAT	40	6.7757355E-9	45.000004	12
CGAATAT	40	6.7757355E-9	45.000004	14
CGATGAT	20	7.022075E-4	45.000004	10
AATACGG	20	7.022075E-4	45.000004	2
TACACGG	20	7.022075E-4	45.000004	2
GCGTAAG	20	7.022075E-4	45.000004	2
TGCGTTG	20	7.022075E-4	45.000004	1
TACGTAG	20	7.022075E-4	45.000004	2
CGCGAAG	25	3.8815157E-5	45.0	2
CGACAAG	25	3.8815157E-5	45.0	2
CGTTTTA	145	0.0	41.89655	1
CGATTAT	45	1.9173967E-8	40.000004	10
TACGAAG	45	1.9173967E-8	40.000004	2
GCTACGA	45	1.9173967E-8	40.000004	10
CGAAGGA	85	0.0	39.705883	4
TTAATCG	40	3.4429286E-7	39.375004	20
ATCGTTG	40	3.4429286E-7	39.375004	23