##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934569.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 239231 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.454982840852566 33.0 31.0 34.0 31.0 34.0 2 32.66874276327064 34.0 31.0 34.0 31.0 34.0 3 32.53827472192149 34.0 31.0 34.0 31.0 34.0 4 36.21179529408814 37.0 35.0 37.0 35.0 37.0 5 32.65455981875259 37.0 35.0 37.0 16.0 37.0 6 34.42522917180466 37.0 35.0 37.0 25.0 37.0 7 20.030593861163478 32.0 0.0 37.0 0.0 37.0 8 27.810037160735856 35.0 17.0 37.0 17.0 37.0 9 35.06221601715497 37.0 32.0 39.0 32.0 39.0 10 36.70205366361383 37.0 35.0 39.0 34.0 39.0 11 37.20241523882775 39.0 37.0 39.0 34.0 39.0 12 37.46999343730537 39.0 37.0 39.0 35.0 39.0 13 37.18469596331579 39.0 37.0 39.0 34.0 39.0 14 38.49556286601653 40.0 38.0 41.0 35.0 41.0 15 38.72256521939046 40.0 38.0 41.0 35.0 41.0 16 38.85200078585133 40.0 38.0 41.0 35.0 41.0 17 38.8550271494915 40.0 38.0 41.0 35.0 41.0 18 38.79054553966668 40.0 38.0 41.0 35.0 41.0 19 38.73069125656792 40.0 38.0 41.0 35.0 41.0 20 38.674966873022306 40.0 38.0 41.0 35.0 41.0 21 38.57574478223976 40.0 38.0 41.0 35.0 41.0 22 38.57096697334376 40.0 38.0 41.0 35.0 41.0 23 38.515150628472064 40.0 37.0 41.0 35.0 41.0 24 38.41187387922134 40.0 37.0 41.0 34.0 41.0 25 38.318792296984924 40.0 37.0 41.0 34.0 41.0 26 38.19196926819685 40.0 37.0 41.0 34.0 41.0 27 38.146323009977806 40.0 37.0 41.0 34.0 41.0 28 38.079834971220286 40.0 37.0 41.0 34.0 41.0 29 38.02100898294953 40.0 36.0 41.0 34.0 41.0 30 37.88006571054755 40.0 36.0 41.0 34.0 41.0 31 37.73396006370412 40.0 36.0 41.0 33.0 41.0 32 37.65633634437009 40.0 36.0 41.0 33.0 41.0 33 37.50491366085499 40.0 36.0 41.0 33.0 41.0 34 37.34705786457441 40.0 36.0 41.0 33.0 41.0 35 37.164911738027264 40.0 35.0 41.0 32.0 41.0 36 37.01176686967826 40.0 35.0 41.0 32.0 41.0 37 36.92256856343869 40.0 35.0 41.0 31.0 41.0 38 36.77817674130861 40.0 35.0 41.0 31.0 41.0 39 36.624856310427994 40.0 35.0 41.0 31.0 41.0 40 36.45084458117886 39.0 35.0 41.0 30.0 41.0 41 36.299940225138045 39.0 35.0 41.0 30.0 41.0 42 36.21500976044074 39.0 35.0 41.0 30.0 41.0 43 36.15100049742717 39.0 35.0 41.0 29.0 41.0 44 35.988379432431415 39.0 35.0 41.0 29.0 41.0 45 35.93081582236416 39.0 35.0 41.0 29.0 41.0 46 35.848263811964166 39.0 35.0 40.0 28.0 41.0 47 35.743720504449676 39.0 35.0 40.0 28.0 41.0 48 35.63092993800971 38.0 35.0 40.0 28.0 41.0 49 35.52788309207419 38.0 35.0 40.0 27.0 41.0 50 35.372723434671926 38.0 35.0 40.0 27.0 41.0 51 33.50763906015525 36.0 32.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 10.0 9 18.0 10 14.0 11 10.0 12 7.0 13 12.0 14 2.0 15 12.0 16 23.0 17 32.0 18 61.0 19 119.0 20 207.0 21 350.0 22 592.0 23 877.0 24 1332.0 25 1945.0 26 2377.0 27 2598.0 28 2870.0 29 3010.0 30 3509.0 31 4468.0 32 6277.0 33 10375.0 34 15190.0 35 19749.0 36 25723.0 37 48305.0 38 53756.0 39 35396.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.67266365980998 21.09634620931234 26.702225046085164 13.528765084792523 2 32.04517809146808 24.396921803612408 26.832224920683355 16.72567518423616 3 31.081674197741933 23.674607387838535 28.528075374846907 16.71564303957263 4 28.130551642554686 25.70695269425785 28.284377860728753 17.87811780245871 5 23.20017054645928 36.974305169480544 23.31804824625571 16.507476037804462 6 26.89785186702392 34.48716930498138 24.434542346100628 14.180436481894068 7 47.89513064778394 45.52461846499827 4.371507037131475 2.2087438500863183 8 87.59023705121828 3.9175524911069215 6.294334764307301 2.1978756933674983 9 82.26107820474772 6.392148174776681 7.742725650103874 3.6040479703717327 10 44.07748159728463 27.874731953634775 15.199953183324904 12.847833265755693 11 34.223825507563824 24.41865811705005 23.885700431800228 17.471815943585906 12 31.76260601677876 22.176473784751977 27.638140541986616 18.422779656482646 13 25.92222579849601 25.785955833483122 28.66685337602568 19.624964991995185 14 20.649079759730135 26.760745889955732 31.10299250515192 21.487181845162205 15 20.55335637939899 24.825795987978147 34.190803031379716 20.43004460124315 16 24.898947042816356 24.016118312426066 30.481417542040955 20.60351710271662 17 25.292708720859753 24.170362536627778 28.01601799097943 22.520910751533037 18 25.70151861589844 24.272774013401275 28.93479523974736 21.09091213095293 19 26.443897320999373 26.014605130605982 26.30261128365471 21.238886264739936 20 26.507016231174052 25.43483077025971 28.102127232674697 19.956025765891543 21 26.081486095029486 25.197403346556257 29.15132236206846 19.56978819634579 22 25.86412296065309 22.84361140487646 29.11495583766318 22.177309796807272 23 23.729366177460278 24.49013714777767 29.40547002687779 22.375026647884262 24 22.03644176549026 24.930297494889878 31.692799010161725 21.340461729458138 25 23.966375595136082 26.338977808059994 27.74598609711952 21.948660499684404 26 21.619271749898633 26.90621198757686 28.073284816767057 23.401231445757446 27 21.27274475297934 27.580455710171343 29.206917163745498 21.93988237310382 28 20.476443270311957 26.82888087246218 30.054215381785802 22.640460475440054 29 21.31036529546756 25.57402677746613 30.102704080992847 23.01290384607346 30 22.773804398259422 25.936019997408362 30.157462870614594 21.13271273371762 31 24.52859370232119 26.804218516831014 28.368815078313432 20.29837270253437 32 26.119106637517714 25.658045989023158 26.624475924942836 21.59837144851629 33 24.886406861986952 26.563865050934034 26.772868064757493 21.77686002232152 34 22.059014090983194 25.532644180729086 29.612801016590662 22.79554071169706 35 22.433547491754833 27.42579347994198 29.052254933516142 21.088404094787048 36 25.11589217116511 27.32547203330672 27.12900920031267 20.429626595215503 37 22.910492369299966 28.56026183897572 27.376050762652 21.153195029072318 38 22.99785562907817 27.521516860273127 28.063252672103534 21.41737483854517 39 22.513386643035393 27.049588055059754 27.103510832626203 23.333514469278647 40 25.31235500415916 25.497949680434388 27.83167733278714 21.35801798261931 41 21.267310674619928 26.0664378780342 28.75505264785918 23.911198799486687 42 22.04271185590496 25.128850358022163 28.828621708725038 23.999816077347834 43 22.52968887811362 25.84196864118781 28.786821105960346 22.841521374738225 44 21.97081481914969 26.853961234120998 28.37048710242402 22.804736844305296 45 21.216313939247 28.399747524359302 26.84225706534688 23.541681471046815 46 22.088274512918478 27.63605051184838 27.677015102557778 22.598659872675363 47 21.632229936755685 26.919588180461563 29.55846023299656 21.88972164978619 48 21.84374098674503 26.49238602020641 29.686370077456516 21.977502915592044 49 22.57901358937596 26.55341490024286 28.58994026693865 22.27763124344253 50 21.607985587152168 26.81257863738395 29.094891548336125 22.484544227127756 51 21.552808791502773 27.81412107962597 27.729683862041295 22.903386266829965 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 180.0 1 472.0 2 764.0 3 1488.0 4 2212.0 5 1540.0 6 868.0 7 789.0 8 710.0 9 720.5 10 731.0 11 750.5 12 770.0 13 729.5 14 689.0 15 666.0 16 643.0 17 719.0 18 795.0 19 829.0 20 863.0 21 888.0 22 913.0 23 1013.0 24 1113.0 25 1387.0 26 2001.5 27 2342.0 28 2932.0 29 3522.0 30 4235.0 31 4948.0 32 5957.0 33 6966.0 34 7847.0 35 8728.0 36 9174.0 37 9620.0 38 10252.0 39 10884.0 40 11829.0 41 12774.0 42 13626.0 43 14478.0 44 14737.0 45 14996.0 46 15413.0 47 15830.0 48 15609.0 49 15388.0 50 15414.5 51 15441.0 52 14800.5 53 14160.0 54 13679.5 55 13199.0 56 13080.5 57 12962.0 58 12374.0 59 11786.0 60 10926.5 61 10067.0 62 9040.5 63 8014.0 64 7176.5 65 6339.0 66 5492.0 67 4645.0 68 3956.5 69 3268.0 70 2729.5 71 2191.0 72 1845.0 73 1499.0 74 1230.0 75 754.0 76 547.0 77 447.0 78 347.0 79 277.0 80 207.0 81 150.5 82 94.0 83 77.5 84 61.0 85 42.5 86 24.0 87 21.0 88 18.0 89 12.5 90 7.0 91 4.5 92 2.0 93 2.5 94 3.0 95 2.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 239231.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.79986707408321 #Duplication Level Percentage of deduplicated Percentage of total 1 63.81028209976888 24.12020181331015 2 9.7922126751374 7.40288674962693 3 5.656371296818499 6.414302494241967 4 4.044056663238563 6.114592172419126 5 3.2445343860929574 6.132148425580297 6 2.662862577270566 6.039351087442681 7 2.17076380364706 5.743820825896309 8 1.8511760607769632 5.5979367222475345 9 1.5138948788552344 5.150252266637685 >10 5.2372579592829736 26.39917067604115 >50 0.011058399407269793 0.2616717733069711 >100 0.0044233597629079165 0.35530512349988086 >500 0.0011058399407269791 0.2683598697493218 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 642 0.2683598697493218 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 423 0.17681654969464658 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.008778126580585292 0.0 2 0.0 0.0 0.0 0.04765268715174873 0.0 3 0.0 0.0 0.0 0.06646295839586007 0.0 4 0.0 0.0 0.0 0.09070730799938136 0.0 5 0.0 0.0 0.0 0.17807056777758734 0.0 6 0.0 0.0 0.0 0.23826343575874365 0.0 7 0.0 0.0 0.0 0.30514440018225064 0.0 8 0.0 0.0 0.0 0.4773628835727811 0.0 9 0.0 0.0 0.0 0.549677926355698 0.0 10 0.0 0.0 0.0 0.7499028135985721 0.0 11 0.0 0.0 0.0 1.0145006290990717 0.0 12 0.0 0.0 0.0 1.2214136127842963 0.0 13 0.0 0.0 0.0 1.3188090172260285 0.0 14 0.0 0.0 0.0 1.3589375958801326 0.0 15 0.0 0.0 0.0 1.4162044216677605 0.0 16 0.0 0.0 0.0 1.5508023625700682 0.0 17 0.0 0.0 0.0 1.696268460191196 0.0 18 0.0 0.0 0.0 1.8835351605770154 0.0 19 0.0 0.0 0.0 1.9968147940693304 0.0 20 0.0 0.0 0.0 2.1301587168886975 0.0 21 0.0 0.0 0.0 2.288164995339233 0.0 22 0.0 0.0 0.0 2.4532773762597655 0.0 23 0.0 0.0 0.0 2.621733805401474 0.0 24 0.0 0.0 0.0 2.750897667944372 0.0 25 0.0 0.0 0.0 2.885077602819033 0.0 26 0.0 0.0 0.0 3.0205115557766344 0.0 27 0.0 0.0 0.0 3.194820069305399 0.0 28 0.0 0.0 0.0 3.3273279800694726 0.0 29 0.0 0.0 0.0 3.491186342907065 0.0 30 0.0 0.0 0.0 3.6525366695787755 0.0 31 0.0 0.0 0.0 3.793822706923434 0.0 32 0.0 0.0 0.0 3.9338547261851518 0.0 33 0.0 0.0 0.0 4.0676166550321655 0.0 34 0.0 0.0 0.0 4.228966981703876 0.0 35 0.0 0.0 0.0 4.433371929223219 0.0 36 0.0 0.0 0.0 4.6026643704202215 0.0 37 0.0 0.0 0.0 4.788259046695454 0.0 38 0.0 0.0 0.0 4.993082000242444 0.0 39 0.0 0.0 0.0 5.32581479824939 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACAGTAC 20 7.022075E-4 45.000004 36 CGCATAG 20 7.022075E-4 45.000004 2 TCAATAG 20 7.022075E-4 45.000004 2 TACGAAT 40 6.7757355E-9 45.000004 12 CGAATAT 40 6.7757355E-9 45.000004 14 CGATGAT 20 7.022075E-4 45.000004 10 AATACGG 20 7.022075E-4 45.000004 2 TACACGG 20 7.022075E-4 45.000004 2 GCGTAAG 20 7.022075E-4 45.000004 2 TGCGTTG 20 7.022075E-4 45.000004 1 TACGTAG 20 7.022075E-4 45.000004 2 CGCGAAG 25 3.8815157E-5 45.0 2 CGACAAG 25 3.8815157E-5 45.0 2 CGTTTTA 145 0.0 41.89655 1 CGATTAT 45 1.9173967E-8 40.000004 10 TACGAAG 45 1.9173967E-8 40.000004 2 GCTACGA 45 1.9173967E-8 40.000004 10 CGAAGGA 85 0.0 39.705883 4 TTAATCG 40 3.4429286E-7 39.375004 20 ATCGTTG 40 3.4429286E-7 39.375004 23 >>END_MODULE