SRR2934567.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934567.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	219357
Sequences flagged as poor quality	0
Sequence length	51
%GC	40

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2821	1.2860314464548657	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1482	0.6756109903034778	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	585	0.26668854880400444	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	309	0.14086625911185874	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTAGGTC	20	7.0207956E-4	45.0	5
CGGGTAT	25	3.8804552E-5	45.0	6
ACACGTT	20	7.0207956E-4	45.0	17
AGATCGA	20	7.0207956E-4	45.0	15
CCGGGAC	20	7.0207956E-4	45.0	5
GATCGAC	20	7.0207956E-4	45.0	16
GGCGTTA	20	7.0207956E-4	45.0	32
GGGTACG	20	7.0207956E-4	45.0	7
GCGTTAA	20	7.0207956E-4	45.0	33
GGCCCGT	20	7.0207956E-4	45.0	43
CGTTAAT	20	7.0207956E-4	45.0	34
CAGGCGA	20	7.0207956E-4	45.0	6
ACTACCT	20	7.0207956E-4	45.0	29
GATTGCC	20	7.0207956E-4	45.0	9
TACTAAG	20	7.0207956E-4	45.0	2
TAGGCGA	40	6.7720975E-9	45.0	6
CACACGT	20	7.0207956E-4	45.0	16
CACGTTC	20	7.0207956E-4	45.0	18
TAGGATC	50	2.1827873E-11	45.0	6
GGCGATC	40	6.7720975E-9	45.0	8