SRR2934565.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934565.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	406271
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1282	0.3155529191106429	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	702	0.17279106803094485	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGATGCA	25	3.886337E-5	45.000004	10
GTGCGAA	25	3.886337E-5	45.000004	1
AACAACG	20	7.027895E-4	45.0	37
TAGCCGT	20	7.027895E-4	45.0	44
AATAGGC	20	7.027895E-4	45.0	4
GCTCGAT	20	7.027895E-4	45.0	19
CGTCAAA	20	7.027895E-4	45.0	20
CGTTTTA	295	0.0	41.94915	1
TACGAAT	100	0.0	40.500004	12
CGAATAT	100	0.0	40.500004	14
CGTTATT	130	0.0	39.80769	1
TACGGGT	40	3.4508594E-7	39.375	4
TTTACGG	35	6.2383224E-6	38.571426	2
TACTGAC	125	0.0	37.800003	20
GTAAGGA	215	0.0	37.67442	4
ACACGCG	60	1.546141E-10	37.499996	36
CGCATAG	30	1.1386231E-4	37.499996	2
TGAACGG	60	1.546141E-10	37.499996	2
AATACGG	30	1.1386231E-4	37.499996	2
CGCCAGA	30	1.1386231E-4	37.499996	39