##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934565.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 406271 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.958599063186888 33.0 31.0 34.0 30.0 34.0 2 32.14218588085293 33.0 31.0 34.0 30.0 34.0 3 32.02423997774884 33.0 31.0 34.0 30.0 34.0 4 35.78679994387982 37.0 35.0 37.0 35.0 37.0 5 32.04535642465251 37.0 35.0 37.0 0.0 37.0 6 33.93811027614573 37.0 35.0 37.0 19.0 37.0 7 20.792766404690465 32.0 0.0 37.0 0.0 37.0 8 28.1290714818434 35.0 17.0 37.0 17.0 37.0 9 34.90673712866535 37.0 32.0 39.0 32.0 39.0 10 36.23544382936513 37.0 35.0 39.0 32.0 39.0 11 36.66927740350653 38.0 35.0 39.0 33.0 39.0 12 37.00051443494613 39.0 37.0 39.0 33.0 39.0 13 36.752647863125844 39.0 37.0 39.0 33.0 39.0 14 38.048238737197586 40.0 37.0 41.0 33.0 41.0 15 38.24729306300474 40.0 38.0 41.0 33.0 41.0 16 38.34096452860283 40.0 38.0 41.0 34.0 41.0 17 38.336127855544696 40.0 37.0 41.0 34.0 41.0 18 38.244856265891485 40.0 37.0 41.0 34.0 41.0 19 38.19355553312936 40.0 37.0 41.0 34.0 41.0 20 38.15014116193378 40.0 37.0 41.0 34.0 41.0 21 38.07606991392445 40.0 37.0 41.0 34.0 41.0 22 38.0735469674183 40.0 37.0 41.0 34.0 41.0 23 38.00321952588297 40.0 37.0 41.0 34.0 41.0 24 37.90353237124973 40.0 36.0 41.0 33.0 41.0 25 37.74532762614117 40.0 36.0 41.0 33.0 41.0 26 37.60401800768452 40.0 36.0 41.0 33.0 41.0 27 37.56966162979883 40.0 36.0 41.0 33.0 41.0 28 37.47981027442274 40.0 36.0 41.0 33.0 41.0 29 37.47594585879868 40.0 36.0 41.0 33.0 41.0 30 37.32838671724046 40.0 36.0 41.0 32.0 41.0 31 37.1895262029532 39.0 35.0 41.0 32.0 41.0 32 37.09058731733252 39.0 35.0 41.0 31.0 41.0 33 36.939414824095245 39.0 35.0 41.0 31.0 41.0 34 36.773833229543825 39.0 35.0 41.0 31.0 41.0 35 36.65522028399763 39.0 35.0 41.0 30.0 41.0 36 36.4780799023312 39.0 35.0 41.0 30.0 41.0 37 36.39118470183695 39.0 35.0 41.0 30.0 41.0 38 36.255565866133686 39.0 35.0 41.0 30.0 41.0 39 36.142838154827686 39.0 35.0 41.0 29.0 41.0 40 36.042380578480866 39.0 35.0 40.0 29.0 41.0 41 35.88914296122539 39.0 35.0 40.0 28.0 41.0 42 35.79295593335483 39.0 35.0 40.0 27.0 41.0 43 35.70271813641633 39.0 35.0 40.0 27.0 41.0 44 35.57961803820603 38.0 35.0 40.0 27.0 41.0 45 35.479401680159306 38.0 34.0 40.0 26.0 41.0 46 35.35379832673265 38.0 34.0 40.0 26.0 41.0 47 35.30762963637572 38.0 34.0 40.0 26.0 41.0 48 35.18151923223661 38.0 34.0 40.0 26.0 41.0 49 35.07053420007827 38.0 34.0 40.0 25.0 41.0 50 34.91122181991823 38.0 34.0 40.0 24.0 41.0 51 33.08405473194001 36.0 31.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 15.0 9 24.0 10 22.0 11 20.0 12 12.0 13 10.0 14 12.0 15 20.0 16 47.0 17 97.0 18 153.0 19 274.0 20 489.0 21 852.0 22 1289.0 23 1967.0 24 2850.0 25 3913.0 26 4772.0 27 5387.0 28 6135.0 29 6943.0 30 8521.0 31 10705.0 32 14367.0 33 20292.0 34 27736.0 35 35638.0 36 45694.0 37 76527.0 38 79446.0 39 52033.0 40 9.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.24333511375412 19.450563786241204 26.736094872634276 13.570006227370401 2 30.241636740008516 24.36427901573088 28.75322137194139 16.640862872319214 3 30.82302207147446 23.5813041048955 30.12373514230649 15.47193868132355 4 27.443996741091535 26.105481316658093 29.104464753821958 17.346057188428414 5 21.738937802599743 37.8776727849145 24.686231604027853 15.6971578084579 6 26.31519355307172 34.867859138358384 25.236849295174896 13.580098013395 7 49.86449931203556 42.92282737384652 4.6936650659289 2.5190082481890164 8 87.19007755906772 4.1890757646989325 6.376285779688927 2.244560896544425 9 81.99034634517353 6.593874532024191 7.773382791289558 3.6423963315127095 10 40.640853026674314 32.125354750892875 14.72760792672871 12.506184295704099 11 31.43492890213675 27.256683346830073 24.51984020518324 16.788547545849937 12 28.468436093149645 23.98866766271774 28.904105880065277 18.638790364067333 13 23.886026814613892 26.06831400715286 30.660076648345562 19.385582529887685 14 20.446943050328475 27.91535699077709 31.31185834086115 20.325841618033284 15 20.140005070507126 26.173416266482224 34.290412064853264 19.39616659815739 16 24.65251027023834 24.596143953174114 31.52058601278457 19.23075976380298 17 25.132485459213182 23.80184655070138 28.902382892207417 22.163285097878017 18 25.026398635393615 24.731521570577275 30.103797711379844 20.138282082649265 19 25.371488489210403 25.964934735681354 27.82354635206549 20.840030423042748 20 25.333336615214968 27.018172599077957 28.935119661506732 18.713371124200346 21 25.109840475938473 26.200245648840305 29.692249754474233 18.99766412074699 22 24.92892675086334 23.725050520465405 29.29596254716679 22.050060181504463 23 22.68756568891208 25.899215055960184 29.883009124451416 21.530210130676323 24 22.08476607978418 25.3906874967694 31.66384014610937 20.860706277337048 25 22.88250945797263 26.548781478372813 29.42174066079046 21.146968402864097 26 22.007231626180555 27.645340179338422 28.30401382328544 22.04341437119558 27 21.339943042944242 27.276620777756722 30.139242033027212 21.244194146271823 28 20.21261670165973 27.318957050835525 30.75951766185625 21.708908585648494 29 20.88975092979809 26.398881534739125 30.983998365622945 21.727369169839836 30 22.341491270605086 26.629515766569607 29.636375719655106 21.3926172431702 31 23.968484090668543 27.307388418075618 28.697101195999714 20.02702629525612 32 25.055935570099763 26.70409652670262 27.912895579551577 20.32707232364604 33 24.202318157092186 26.420541953523635 28.070918180229455 21.306221709154727 34 22.233189176682558 27.3750772267772 29.42986331783465 20.961870278705593 35 23.01001055945416 27.262836874893853 29.074927819115814 20.65222474653618 36 24.085647265002915 27.257667911320276 28.29761415409911 20.359070669577694 37 22.989334705159855 28.475820326826184 28.014305722042675 20.520539245971285 38 22.58024815947976 27.723613056309702 28.64467313689631 21.05146564731423 39 22.610523517553556 27.371138968816382 27.979353682640408 22.038983830989658 40 23.801108127333727 26.039269354691818 29.04859071900283 21.11103179897162 41 21.500673195970176 25.57873931439852 29.29423955930893 23.62634793032237 42 22.320323134065685 26.4852770687546 28.597414041366477 22.596985755813236 43 22.245003950565017 26.605393936559587 28.928966133442945 22.220635979432448 44 21.964403070856644 26.843904684311703 28.703747006308593 22.487945238523054 45 21.884407206027504 27.342340457477892 27.968277332125602 22.804975004369005 46 22.345183387443356 28.135407154337866 27.87203615320808 21.647373305010696 47 21.52553344934785 26.527859482955957 30.088290820659118 21.858316247037077 48 21.974740998003796 26.25415055467902 29.70283382274393 22.068274624573252 49 22.591816792239662 26.290333299694048 29.115787245459313 22.00206266260698 50 20.8200929921161 27.98058438825316 29.463338510501615 21.735984109129127 51 21.594945245907287 26.972636491405982 28.352749765550584 23.07966849713615 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 245.0 1 566.0 2 887.0 3 2402.5 4 3918.0 5 2740.0 6 1562.0 7 1437.0 8 1312.0 9 1309.0 10 1306.0 11 1328.0 12 1350.0 13 1323.0 14 1296.0 15 1356.5 16 1417.0 17 1364.5 18 1312.0 19 1390.0 20 1468.0 21 1501.5 22 1535.0 23 1891.5 24 2248.0 25 2904.5 26 4386.0 27 5211.0 28 6296.0 29 7381.0 30 8334.0 31 9287.0 32 10894.5 33 12502.0 34 14390.0 35 16278.0 36 16888.5 37 17499.0 38 18357.0 39 19215.0 40 21104.0 41 22993.0 42 24325.5 43 25658.0 44 26640.0 45 27622.0 46 28205.0 47 28788.0 48 28411.0 49 28034.0 50 27387.5 51 26741.0 52 25101.0 53 23461.0 54 22252.0 55 21043.0 56 20320.5 57 19598.0 58 18921.5 59 18245.0 60 16649.5 61 15054.0 62 13449.5 63 11845.0 64 10246.0 65 8647.0 66 7333.5 67 6020.0 68 5124.0 69 4228.0 70 3634.0 71 3040.0 72 2503.0 73 1966.0 74 1504.5 75 856.5 76 670.0 77 509.5 78 349.0 79 289.5 80 230.0 81 163.0 82 96.0 83 70.5 84 45.0 85 33.0 86 21.0 87 17.0 88 13.0 89 11.0 90 9.0 91 10.5 92 12.0 93 8.5 94 5.0 95 3.5 96 2.0 97 2.5 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 406271.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.66161645989706 #Duplication Level Percentage of deduplicated Percentage of total 1 69.82054488935546 25.59734037754576 2 8.071951056781737 5.918615474535857 3 4.200632044820321 4.620058827490673 4 2.8282080570389585 4.147467162238119 5 2.2858278305596826 4.190107160866882 6 1.8619430862954458 4.095710597995239 7 1.5346448946380973 3.938379377055274 8 1.3603632630358855 3.9898492956444556 9 1.1571734010087822 3.818146266484077 >10 6.853612976200097 38.471963567315974 >50 0.019671797505422618 0.45261510665566423 >100 0.004070027070087439 0.2663465819935255 >500 6.783378450145731E-4 0.17458011256718475 >1k 6.783378450145731E-4 0.31882009161129754 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1282 0.3155529191106429 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 702 0.17279106803094485 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02239884215215952 0.0 2 0.0 0.0 0.0 0.11420948086375843 0.0 3 0.0 0.0 0.0 0.15162293149154135 0.0 4 0.0 0.0 0.0 0.1964206157958604 0.0 5 0.0 0.0 0.0 0.3145683546204381 0.0 6 0.0 0.0 0.0 0.42459343640082603 0.0 7 0.0 0.0 0.0 0.5287111312399851 0.0 8 0.0 0.0 0.0 0.8324492764681702 0.0 9 0.0 0.0 0.0 0.9491201685574407 0.0 10 0.0 0.0 0.0 1.2243059435696861 0.0 11 0.0 0.0 0.0 1.5620115637099374 0.0 12 0.0 0.0 0.0 1.8386741854574902 0.0 13 0.0 0.0 0.0 1.970359686022384 0.0 14 0.0 0.0 0.0 2.0284489909444683 0.0 15 0.0 0.0 0.0 2.1246901698619887 0.0 16 0.0 0.0 0.0 2.308803729530289 0.0 17 0.0 0.0 0.0 2.537468832380357 0.0 18 0.0 0.0 0.0 2.8028089624905546 0.0 19 0.0 0.0 0.0 2.9640313977615924 0.0 20 0.0 0.0 0.0 3.153313921003468 0.0 21 0.0 0.0 0.0 3.3837020117113945 0.0 22 0.0 0.0 0.0 3.639442638042095 0.0 23 0.0 0.0 0.0 3.8855837605932986 0.0 24 0.0 0.0 0.0 4.097265125987334 0.0 25 0.0 0.0 0.0 4.275717439836956 0.0 26 0.0 0.0 0.0 4.461800128485666 0.0 27 0.0 0.0 0.0 4.662897425609999 0.0 28 0.0 0.0 0.0 4.846764844155748 0.0 29 0.0 0.0 0.0 5.067307289961627 0.0 30 0.0 0.0 0.0 5.308279448939254 0.0 31 2.461411225512035E-4 0.0 0.0 5.543344220975654 0.0 32 2.461411225512035E-4 0.0 0.0 5.747395211570602 0.0 33 2.461411225512035E-4 0.0 0.0 5.960799564822495 0.0 34 2.461411225512035E-4 0.0 0.0 6.189218526550012 0.0 35 2.461411225512035E-4 0.0 0.0 6.451604963189595 0.0 36 2.461411225512035E-4 0.0 0.0 6.675839525833742 0.0 37 2.461411225512035E-4 0.0 0.0 6.9109042978701405 0.0 38 2.461411225512035E-4 0.0 0.0 7.199873975745254 0.0 39 2.461411225512035E-4 0.0 0.0 7.601084005503716 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGATGCA 25 3.886337E-5 45.000004 10 GTGCGAA 25 3.886337E-5 45.000004 1 AACAACG 20 7.027895E-4 45.0 37 TAGCCGT 20 7.027895E-4 45.0 44 AATAGGC 20 7.027895E-4 45.0 4 GCTCGAT 20 7.027895E-4 45.0 19 CGTCAAA 20 7.027895E-4 45.0 20 CGTTTTA 295 0.0 41.94915 1 TACGAAT 100 0.0 40.500004 12 CGAATAT 100 0.0 40.500004 14 CGTTATT 130 0.0 39.80769 1 TACGGGT 40 3.4508594E-7 39.375 4 TTTACGG 35 6.2383224E-6 38.571426 2 TACTGAC 125 0.0 37.800003 20 GTAAGGA 215 0.0 37.67442 4 ACACGCG 60 1.546141E-10 37.499996 36 CGCATAG 30 1.1386231E-4 37.499996 2 TGAACGG 60 1.546141E-10 37.499996 2 AATACGG 30 1.1386231E-4 37.499996 2 CGCCAGA 30 1.1386231E-4 37.499996 39 >>END_MODULE