SRR2934564.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934564.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	274792
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1396	0.5080206119537687	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	741	0.2696585053422225	No Hit
CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	279	0.10153134006812427	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTCGTT	20	7.023907E-4	45.0	27
AACGTAT	20	7.023907E-4	45.0	30
AGCCGTT	25	3.8830334E-5	45.0	45
CGAAACA	25	3.8830334E-5	45.0	18
CGGTTTA	40	6.7830115E-9	45.0	1
CGCGCGA	20	7.023907E-4	45.0	14
AAGGTAC	25	3.8830334E-5	45.0	6
CGATTAG	20	7.023907E-4	45.0	2
TGACGCT	20	7.023907E-4	45.0	41
AAACGTA	20	7.023907E-4	45.0	29
GAGCGAT	20	7.023907E-4	45.0	6
ACGTATT	20	7.023907E-4	45.0	31
AATCGTT	25	3.8830334E-5	45.0	22
CGTTATT	125	0.0	44.999996	1
CGTTTTA	245	0.0	44.081635	1
CGTTTTT	610	0.0	40.204918	1
AGGACCG	45	1.9192157E-8	40.000004	7
CACAACG	45	1.9192157E-8	40.000004	12
GCGTAAG	40	3.4454206E-7	39.375	2
CGGTTTT	105	0.0	38.57143	1