##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934564.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 274792 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.900532038778422 31.0 31.0 34.0 30.0 34.0 2 32.106960901336286 33.0 31.0 34.0 30.0 34.0 3 31.860479926635417 33.0 31.0 34.0 30.0 34.0 4 35.68916489563015 37.0 35.0 37.0 35.0 37.0 5 32.03346531194504 37.0 35.0 37.0 0.0 37.0 6 33.92427363242016 37.0 35.0 37.0 19.0 37.0 7 20.83695304084544 32.0 0.0 37.0 0.0 37.0 8 28.155848787446505 35.0 17.0 37.0 17.0 37.0 9 34.883191650411945 37.0 32.0 39.0 32.0 39.0 10 36.16718099507992 37.0 35.0 39.0 32.0 39.0 11 36.63065154735218 38.0 35.0 39.0 33.0 39.0 12 36.96498442458296 39.0 37.0 39.0 33.0 39.0 13 36.73475210340912 39.0 35.0 39.0 33.0 39.0 14 38.08374697953361 40.0 37.0 41.0 33.0 41.0 15 38.28950260560715 40.0 38.0 41.0 34.0 41.0 16 38.37535663338088 40.0 38.0 41.0 34.0 41.0 17 38.35315074674663 40.0 37.0 41.0 34.0 41.0 18 38.238016390579055 40.0 37.0 41.0 34.0 41.0 19 38.16545241491747 40.0 37.0 41.0 34.0 41.0 20 38.113023668811316 40.0 37.0 41.0 34.0 41.0 21 38.037195405979794 40.0 37.0 41.0 34.0 41.0 22 37.98930099857347 40.0 36.0 41.0 34.0 41.0 23 37.929866953914235 40.0 36.0 41.0 34.0 41.0 24 37.77087760924626 40.0 36.0 41.0 33.0 41.0 25 37.65193673760517 39.0 35.0 41.0 33.0 41.0 26 37.52053189321378 39.0 35.0 41.0 33.0 41.0 27 37.48398424990538 39.0 35.0 41.0 33.0 41.0 28 37.397828175492734 39.0 35.0 41.0 33.0 41.0 29 37.39736236862791 39.0 35.0 41.0 33.0 41.0 30 37.247616378933884 39.0 35.0 41.0 32.0 41.0 31 37.10873679000844 39.0 35.0 41.0 32.0 41.0 32 36.973983958776095 39.0 35.0 41.0 31.0 41.0 33 36.79932821916213 39.0 35.0 41.0 31.0 41.0 34 36.592593670849226 39.0 35.0 41.0 30.0 41.0 35 36.43790940056479 39.0 35.0 41.0 30.0 41.0 36 36.236800925791144 39.0 35.0 41.0 30.0 41.0 37 36.11494876124487 39.0 35.0 41.0 29.0 41.0 38 36.00197967917552 39.0 35.0 40.0 29.0 41.0 39 35.92486680834959 39.0 35.0 40.0 28.0 41.0 40 35.848747416227546 39.0 35.0 40.0 27.0 41.0 41 35.75039666365833 39.0 35.0 40.0 27.0 41.0 42 35.627139800285306 39.0 35.0 40.0 27.0 41.0 43 35.516306879385134 39.0 35.0 40.0 26.0 41.0 44 35.38780604966666 38.0 35.0 40.0 26.0 41.0 45 35.252412733995165 38.0 34.0 40.0 25.0 41.0 46 35.13966199889371 38.0 34.0 40.0 24.0 41.0 47 35.1120847768494 38.0 34.0 40.0 24.0 41.0 48 35.00378831989286 38.0 34.0 40.0 24.0 41.0 49 34.85523596028997 38.0 34.0 40.0 24.0 41.0 50 34.69817898628781 38.0 34.0 40.0 23.0 41.0 51 32.812101516783606 36.0 31.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 6.0 9 20.0 10 14.0 11 8.0 12 5.0 13 8.0 14 7.0 15 11.0 16 29.0 17 46.0 18 91.0 19 183.0 20 334.0 21 550.0 22 969.0 23 1540.0 24 2286.0 25 3024.0 26 3741.0 27 3966.0 28 4167.0 29 4666.0 30 5766.0 31 7179.0 32 9578.0 33 13855.0 34 19248.0 35 24996.0 36 31395.0 37 51290.0 38 52281.0 39 33530.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.22048676817375 21.296471512998924 27.539739148155697 14.943302570671635 2 33.263340999737984 24.210675711083294 26.47711723776529 16.048866051413434 3 30.891729016856385 23.27505895368133 29.83893272002096 15.994279309441323 4 26.774069114093567 25.69798247401671 29.656613001834113 17.871335410055604 5 22.039215115432764 36.40644560249206 25.1612128446243 16.39312643745087 6 25.340257358292817 34.69569710908614 26.390142362223063 13.573903170397974 7 48.993784389647445 42.62423942472852 5.996171649829689 2.3858045357943465 8 85.79725756208332 3.6864246411831494 8.210937727444758 2.305380069288771 9 79.89169990392733 7.210908614515707 9.677137616815628 3.2202538647413315 10 38.81881568604617 31.170121400914148 17.778901860316164 12.232161052723514 11 31.31532213455996 25.444336079652974 26.785350374101135 16.454991411685928 12 27.907653789047714 23.137136452298463 30.590046289557193 18.365163469096625 13 22.538501848670993 26.67035430434656 32.24256892485953 18.548574922122913 14 19.855381524935222 28.83053363998952 32.03441148213922 19.27967335293604 15 19.30223587295118 26.2522198608402 35.51013129931002 18.9354129668986 16 23.39551369763312 24.327855250516755 33.42637340242802 18.850257649422108 17 23.49631721447495 24.179379312352616 30.4004483391074 21.923855134065036 18 24.42902267897173 24.458135608023525 31.46852892369501 19.64431278930973 19 23.90608169087892 27.113962560773242 28.856371364522985 20.12358438382486 20 24.895557367026697 26.069172319427057 29.958659640746454 19.07661067279979 21 23.894072607645057 26.597935893330227 30.133701126670353 19.374290372354363 22 23.884246994090073 23.42207924539288 31.237808960959562 21.455864799557485 23 21.42966316341087 26.273326734402747 31.09588343183208 21.201126670354302 24 21.22150572069056 25.505473230661735 33.10867856415034 20.164342484497368 25 21.268450318786574 27.38835191708638 30.409910041049233 20.933287723077818 26 20.684736091298145 29.337826428716994 29.15950973827477 20.817927741710093 27 20.79318175201607 28.044120643977994 30.433928207516956 20.728769396488982 28 19.78551049521092 27.666744301144135 32.259672770677454 20.28807243296748 29 20.385600745290983 26.065897114908733 32.10646598154241 21.44203615825788 30 21.181111531631196 27.255524178287576 30.680660281230892 20.882704008850332 31 23.29034324143352 27.748624414102302 28.694066785059245 20.26696555940493 32 23.178258464584122 27.29591836734694 29.205726513144487 20.320096654924452 33 22.603642027424378 27.68712335148039 28.509563597193516 21.199671023901715 34 20.150149931584615 28.566697720457658 30.088939998253224 21.194212349704504 35 21.454409153104894 27.583408541733384 30.15771929313808 20.80446301202364 36 22.817985967568198 28.453521208768812 28.029564179452095 20.69892864421089 37 21.420565373082187 29.011761623336923 29.14276980406999 20.4249031995109 38 21.590876008035167 28.584165477888728 28.520117033974792 21.304841480101313 39 21.19166496841247 27.738798800547322 29.246484613816996 21.823051617223207 40 22.329616582724388 27.504075810067253 28.362543305481964 21.803764301726396 41 20.065358525721273 27.167093656292764 29.40842528166759 23.35912253631838 42 21.38926897435151 26.98368220326647 29.0154007394684 22.61164808291362 43 21.773195726222013 26.922908963870857 29.558720777897463 21.745174532009663 44 21.473696468601705 27.587411569478004 28.50192145331742 22.436970508602872 45 20.59594165769018 29.123118576960028 27.683848146962063 22.597091618387726 46 21.73898803458616 28.885484293574777 28.07068619173775 21.304841480101313 47 20.795365221694954 27.95459838714373 29.822920609042473 21.42711578211884 48 21.579958659640745 27.385804535794346 29.41242830941221 21.6218084951527 49 21.742627150717635 27.010975574252527 29.05433928207517 22.192057992954673 50 20.478762118256718 28.057585373664445 29.42698477393811 22.03666773414073 51 19.80843692683921 28.315598707385952 28.07760051238755 23.79836385338729 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 294.0 1 483.5 2 673.0 3 2416.5 4 4160.0 5 2995.5 6 1831.0 7 1601.0 8 1371.0 9 1360.0 10 1349.0 11 1303.5 12 1258.0 13 1245.5 14 1233.0 15 1156.5 16 1080.0 17 1125.5 18 1171.0 19 1203.0 20 1235.0 21 1219.0 22 1203.0 23 1385.5 24 1568.0 25 1963.5 26 3026.0 27 3693.0 28 4339.5 29 4986.0 30 5646.0 31 6306.0 32 7368.0 33 8430.0 34 9155.0 35 9880.0 36 10344.0 37 10808.0 38 11780.0 39 12752.0 40 14329.0 41 15906.0 42 17161.5 43 18417.0 44 19406.5 45 20396.0 46 20496.5 47 20597.0 48 20540.0 49 20483.0 50 19927.5 51 19372.0 52 17727.0 53 16082.0 54 14796.0 55 13510.0 56 12782.0 57 12054.0 58 11177.0 59 10300.0 60 9354.0 61 8408.0 62 7534.5 63 6661.0 64 5819.5 65 4978.0 66 4210.0 67 3442.0 68 2856.0 69 2270.0 70 1964.0 71 1658.0 72 1393.0 73 1128.0 74 894.5 75 522.0 76 383.0 77 296.5 78 210.0 79 163.0 80 116.0 81 96.0 82 76.0 83 47.0 84 18.0 85 16.0 86 14.0 87 9.5 88 5.0 89 4.5 90 4.0 91 2.0 92 0.0 93 1.0 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 274792.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.751280096868705 #Duplication Level Percentage of deduplicated Percentage of total 1 71.67939036636416 32.79423865824319 2 9.37467980801208 8.578072034296401 3 4.683150951699562 6.427804527813717 4 3.0513988987942007 5.584216228240407 5 2.2926478807051556 5.244578767681699 6 1.7503284616833412 4.804786062719752 7 1.4195526956292739 4.546244709299994 8 1.202732458707668 4.402123967994407 9 0.9228230250426597 3.7998301228709757 >10 3.6049031001292997 22.290281360183105 >50 0.011995012977772154 0.33329675856272933 >100 0.0047980051911088615 0.412687973280745 >500 7.99667531851477E-4 0.2711008760647447 >1k 7.99667531851477E-4 0.510737952748156 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1396 0.5080206119537687 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 741 0.2696585053422225 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 279 0.10153134006812427 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03821071938047687 0.0 2 0.0 0.0 0.0 0.1484759381641387 0.0 3 0.0 0.0 0.0 0.20924917755975428 0.0 4 0.0 0.0 0.0 0.2703863285685173 0.0 5 0.0 0.0 0.0 0.4421526099740895 0.0 6 0.0 0.0 0.0 0.5946315758828495 0.0 7 0.0 0.0 0.0 0.7525692159888207 0.0 8 0.0 0.0 0.0 1.1157530059099245 0.0 9 0.0 0.0 0.0 1.264956767300358 0.0 10 0.0 0.0 0.0 1.6139480043087135 0.0 11 0.0 0.0 0.0 2.1361611691752307 0.0 12 0.0 0.0 0.0 2.499708870709482 0.0 13 0.0 0.0 0.0 2.666744301144138 0.0 14 0.0 0.0 0.0 2.74061835861306 0.0 15 0.0 0.0 0.0 2.8567061632070803 0.0 16 0.0 0.0 0.0 3.157661067279979 0.0 17 0.0 0.0 0.0 3.4913680165361436 0.0 18 0.0 0.0 0.0 3.8534600716178056 0.0 19 0.0 0.0 0.0 4.084180034353256 0.0 20 0.0 0.0 0.0 4.3214504061253605 0.0 21 0.0 0.0 0.0 4.629683542461207 0.0 22 0.0 0.0 0.0 4.937552767183907 0.0 23 0.0 0.0 0.0 5.304011761623337 0.0 24 0.0 0.0 0.0 5.550743835337273 0.0 25 0.0 0.0 0.0 5.808757169058779 0.0 26 0.0 0.0 0.0 6.051486215028094 0.0 27 0.0 0.0 0.0 6.297490465515735 0.0 28 0.0 0.0 0.0 6.550045125040031 0.0 29 0.0 0.0 0.0 6.829165332324085 0.0 30 0.0 0.0 0.0 7.133031529302163 0.0 31 0.0 0.0 0.0 7.423432996593787 0.0 32 0.0 0.0 0.0 7.7014614690384 0.0 33 0.0 0.0 0.0 7.9864042621328135 0.0 34 0.0 0.0 0.0 8.25824623715392 0.0 35 0.0 0.0 0.0 8.557381583161082 0.0 36 3.6391161314739876E-4 0.0 0.0 8.863795161431192 0.0 37 3.6391161314739876E-4 0.0 0.0 9.17312003260648 0.0 38 3.6391161314739876E-4 0.0 0.0 9.499548749599697 0.0 39 3.6391161314739876E-4 0.0 0.0 9.867463390491718 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTCGTT 20 7.023907E-4 45.0 27 AACGTAT 20 7.023907E-4 45.0 30 AGCCGTT 25 3.8830334E-5 45.0 45 CGAAACA 25 3.8830334E-5 45.0 18 CGGTTTA 40 6.7830115E-9 45.0 1 CGCGCGA 20 7.023907E-4 45.0 14 AAGGTAC 25 3.8830334E-5 45.0 6 CGATTAG 20 7.023907E-4 45.0 2 TGACGCT 20 7.023907E-4 45.0 41 AAACGTA 20 7.023907E-4 45.0 29 GAGCGAT 20 7.023907E-4 45.0 6 ACGTATT 20 7.023907E-4 45.0 31 AATCGTT 25 3.8830334E-5 45.0 22 CGTTATT 125 0.0 44.999996 1 CGTTTTA 245 0.0 44.081635 1 CGTTTTT 610 0.0 40.204918 1 AGGACCG 45 1.9192157E-8 40.000004 7 CACAACG 45 1.9192157E-8 40.000004 12 GCGTAAG 40 3.4454206E-7 39.375 2 CGGTTTT 105 0.0 38.57143 1 >>END_MODULE