SRR2934563.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934563.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	410957
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1933	0.47036551269354215	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1095	0.2664512345573868	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGCCAA	20	7.0279907E-4	45.000004	28
TGCGGGT	35	1.2093733E-7	45.000004	4
AATATCG	20	7.0279907E-4	45.000004	12
TCGGACG	20	7.0279907E-4	45.000004	1
ACGGCGT	30	2.1620854E-6	45.000004	33
TACGAAT	30	2.1620854E-6	45.000004	12
CGGGATC	35	1.2093733E-7	45.000004	6
CATACGG	20	7.0279907E-4	45.000004	2
TTAACGG	40	6.7975634E-9	45.000004	2
ACTCGAA	20	7.0279907E-4	45.000004	16
ATAACGG	45	3.8380676E-10	45.000004	2
ATACGAG	20	7.0279907E-4	45.000004	2
TATCGCA	20	7.0279907E-4	45.000004	1
GTATCTC	25	3.8864164E-5	45.0	22
GTACGAA	25	3.8864164E-5	45.0	1
CGTTTTA	385	0.0	43.246754	1
AGGCGAT	195	0.0	41.53846	7
ACTAATC	65	0.0	41.53846	10
CGTTATT	210	0.0	40.714287	1
AATAGGC	45	1.9230356E-8	40.000004	4