##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934563.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 410957 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.790963531464364 31.0 31.0 34.0 30.0 34.0 2 31.981908082840786 33.0 31.0 34.0 30.0 34.0 3 31.81216039634317 33.0 31.0 34.0 30.0 34.0 4 35.628987947644156 37.0 35.0 37.0 33.0 37.0 5 31.966633978737434 37.0 35.0 37.0 0.0 37.0 6 33.85654460198999 37.0 35.0 37.0 19.0 37.0 7 20.90300201724268 32.0 0.0 37.0 0.0 37.0 8 28.153911479789855 35.0 17.0 37.0 17.0 37.0 9 34.75804767895425 37.0 32.0 39.0 30.0 39.0 10 36.091734658370584 37.0 35.0 39.0 32.0 39.0 11 36.56379134556657 38.0 35.0 39.0 32.0 39.0 12 36.85633776769832 39.0 35.0 39.0 33.0 39.0 13 36.55036415002056 39.0 35.0 39.0 32.0 39.0 14 37.865195142070824 40.0 37.0 41.0 33.0 41.0 15 38.05975564353448 40.0 37.0 41.0 33.0 41.0 16 38.152760507790354 40.0 37.0 41.0 33.0 41.0 17 38.108780237348434 40.0 37.0 41.0 33.0 41.0 18 38.02286613927978 40.0 37.0 41.0 33.0 41.0 19 37.97247400579623 40.0 37.0 41.0 34.0 41.0 20 37.93109011405086 40.0 36.0 41.0 34.0 41.0 21 37.82823263747789 40.0 36.0 41.0 33.0 41.0 22 37.80918928257701 39.0 36.0 41.0 33.0 41.0 23 37.737147682117595 39.0 36.0 41.0 33.0 41.0 24 37.62409692498242 39.0 35.0 41.0 33.0 41.0 25 37.4656910577019 39.0 35.0 41.0 33.0 41.0 26 37.34243485328149 39.0 35.0 41.0 33.0 41.0 27 37.294587998257725 39.0 35.0 41.0 33.0 41.0 28 37.192713592906316 39.0 35.0 41.0 32.0 41.0 29 37.231004703655124 39.0 35.0 41.0 32.0 41.0 30 37.03423229194295 39.0 35.0 41.0 32.0 41.0 31 36.90431115664169 39.0 35.0 41.0 31.0 41.0 32 36.79155970089328 39.0 35.0 41.0 31.0 41.0 33 36.62586839985692 39.0 35.0 40.0 31.0 41.0 34 36.42850711874965 39.0 35.0 40.0 30.0 41.0 35 36.26141907790839 39.0 35.0 40.0 30.0 41.0 36 36.0970539496833 39.0 35.0 40.0 29.0 41.0 37 35.98207841696333 39.0 35.0 40.0 29.0 41.0 38 35.89845652951525 39.0 35.0 40.0 29.0 41.0 39 35.822322043425466 39.0 35.0 40.0 28.0 41.0 40 35.677248471251254 38.0 35.0 40.0 27.0 41.0 41 35.584506408213024 38.0 35.0 40.0 27.0 41.0 42 35.477524412529775 38.0 35.0 40.0 26.0 41.0 43 35.371637421920056 38.0 34.0 40.0 26.0 41.0 44 35.23307304657178 38.0 34.0 40.0 25.0 41.0 45 35.15900447005404 38.0 34.0 40.0 25.0 41.0 46 35.00955817761955 38.0 34.0 40.0 24.0 41.0 47 34.98389369204077 38.0 34.0 40.0 24.0 41.0 48 34.87451971860803 38.0 34.0 40.0 24.0 41.0 49 34.71648615305251 38.0 34.0 40.0 24.0 41.0 50 34.49555062938458 38.0 34.0 40.0 23.0 41.0 51 32.464688519723474 35.0 30.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 8.0 9 20.0 10 10.0 11 8.0 12 3.0 13 2.0 14 11.0 15 18.0 16 28.0 17 73.0 18 162.0 19 282.0 20 477.0 21 844.0 22 1420.0 23 2178.0 24 3152.0 25 4261.0 26 5479.0 27 6044.0 28 6792.0 29 7881.0 30 9402.0 31 12064.0 32 16002.0 33 23461.0 34 31929.0 35 39676.0 36 46255.0 37 73559.0 38 73543.0 39 45903.0 40 9.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.534549843414275 20.284847319792583 25.262740384030447 14.917862452762698 2 31.647106631594056 24.25314570624177 26.38061889686756 17.719128765296613 3 30.88936312071579 24.041201390899776 28.931007380334194 16.138428108050235 4 28.112916923181746 25.578345179666 28.33045793112175 17.97827996603051 5 22.21400292488022 36.55175602313624 24.261419077908393 16.972821974075146 6 25.759629352949336 33.58088559143657 26.72980384809116 13.929681207522929 7 47.87678516243792 42.6806210868777 6.599717245356571 2.842876505327808 8 81.15301600897418 5.134600456982117 9.64456135313427 4.067822180909438 9 75.4665329949362 7.977720296770709 11.44182968047752 5.113917027815562 10 39.3323389065036 28.713709706854974 18.640149699360272 13.31380168728115 11 33.54973878045635 24.10373834732101 25.187306701187715 17.159216171034924 12 29.85324498670177 22.23760636757617 29.26145557807751 18.647693067644546 13 22.81893239438676 25.885189934713367 32.12939553286597 19.166482138033906 14 19.365043058032835 27.815562212104915 32.60633107600065 20.213063653861596 15 18.999311363475986 25.158106565893757 37.14305876283893 18.699523307791328 16 21.835131169441084 23.408045123942408 34.27365880128578 20.483164905330728 17 20.94696038758313 23.408045123942408 31.284538285027384 24.360456203447075 18 22.215462931644918 24.575077197857684 32.185119124385274 21.024340746112124 19 23.66670965575474 25.459841297264678 29.46561319067445 21.407835856306136 20 24.627637441386813 25.32138398907915 29.72038437111425 20.330594198419785 21 22.553697832133288 26.94272150127629 30.483481240129745 20.020099426460675 22 22.455147375516173 23.94897763026302 29.860301686064478 23.735573308156326 23 21.299552021257696 25.8102429207922 30.50586801052178 22.38433704742832 24 21.631703560226494 23.947760957959105 32.46690042997199 21.953635051842408 25 19.37501977092494 26.195441372211693 31.017600381548434 23.411938475314937 26 19.195682273327865 27.628681346223573 30.533364804590263 22.642271575858302 27 20.324024167978642 26.965351606129108 31.280401599194075 21.43022262669817 28 17.559501359022963 26.964378268285977 33.90014040398387 21.575979968707188 29 19.8079117766579 24.46144000467202 32.53211406546184 23.198534153208243 30 20.289227340086676 25.643558815155842 32.00334828218037 22.063865562577107 31 22.815282377475015 25.866209846772293 29.704567631163357 21.613940144589336 32 23.206077521492517 25.6399087982441 29.724521056947562 21.42949262331582 33 23.180040734188733 24.984609095355477 29.314989159449773 22.520361011006017 34 20.263190552782895 25.218940181089504 31.470445813065602 23.047423453062 35 21.012417357533757 24.894575344865764 30.86867969154924 23.224327606051244 36 23.395635066442473 25.286587161187178 29.616723890820694 21.70105388154965 37 21.265241862287297 26.692817010052146 31.914287869533798 20.127653258126763 38 21.10902113846461 27.273656367941175 29.268512277440216 22.348810216154003 39 22.231766340517378 25.463734648637203 30.519251405864843 21.78524760498057 40 21.97991517360697 24.075998218791746 30.242093455033007 23.701993152568274 41 20.15101336636193 25.49050143932334 29.521823451115324 24.83666174319941 42 21.734634037137706 24.70209778638641 29.592390444742396 23.970877731733488 43 22.122509167625807 24.057748134233023 30.062512622975152 23.757230075166014 44 19.626140934452994 25.11138634942342 30.984506894881946 24.277965821241636 45 20.55543524018328 26.288881805152364 28.93928075200082 24.216402202663538 46 21.386179089296448 25.904656691576005 29.757857878074834 22.951306341052714 47 20.436688023321175 24.602817326386944 32.078781965023104 22.881712685268777 48 20.728446041799995 24.123935107566 31.624963195662808 23.5226556549712 49 21.198081551111187 23.34015480938395 32.8632922665875 22.598471372917363 50 20.242263789155558 24.188418739673494 30.825609491990647 24.743707979180304 51 19.47478689984597 24.155081918546223 29.954958791309068 26.415172390298743 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 509.0 1 876.0 2 1243.0 3 3562.0 4 5881.0 5 4149.5 6 2418.0 7 2067.0 8 1716.0 9 1705.5 10 1695.0 11 1668.0 12 1641.0 13 1559.5 14 1478.0 15 1515.5 16 1553.0 17 1529.5 18 1506.0 19 1582.5 20 1659.0 21 1787.0 22 1915.0 23 1981.0 24 2047.0 25 2636.0 26 3836.0 27 4447.0 28 5362.0 29 6277.0 30 7288.5 31 8300.0 32 9155.0 33 10010.0 34 10725.5 35 11441.0 36 12365.0 37 13289.0 38 15470.5 39 17652.0 40 19872.0 41 22092.0 42 24374.5 43 26657.0 44 29409.5 45 32162.0 46 34019.5 47 35877.0 48 35940.5 49 36004.0 50 33919.5 51 31835.0 52 27959.0 53 24083.0 54 22123.0 55 20163.0 56 19408.0 57 18653.0 58 17456.5 59 16260.0 60 15196.0 61 14132.0 62 12711.5 63 11291.0 64 9432.0 65 7573.0 66 6374.0 67 5175.0 68 4259.0 69 3343.0 70 2760.5 71 2178.0 72 1805.0 73 1432.0 74 1167.0 75 760.5 76 619.0 77 449.0 78 279.0 79 204.0 80 129.0 81 114.5 82 100.0 83 77.0 84 54.0 85 39.0 86 24.0 87 21.0 88 18.0 89 12.0 90 6.0 91 6.5 92 7.0 93 6.0 94 5.0 95 3.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 410957.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.580042311727055 #Duplication Level Percentage of deduplicated Percentage of total 1 74.33948452741774 27.936809739723373 2 8.184602755968836 6.151554357479735 3 3.3606496682829183 3.788800701868907 4 2.076010073456905 3.120661856003283 5 1.5264285106477207 2.8681624007983926 6 1.2635860482913923 2.8491370295579106 7 1.0363570089949632 2.726243817365993 8 0.8958698746687946 2.6933462236683936 9 0.7762447475310297 2.625417941082478 >10 6.472201720540741 41.73386604847587 >50 0.0411390385193393 1.004904425343351 >100 0.026120024456723366 1.758030599062214 >500 0.0 0.0 >1k 0.0013060012228361683 0.7430648595701262 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1933 0.47036551269354215 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1095 0.2664512345573868 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.4333446078300162E-4 0.0 0.0 0.10122713568572868 0.0 2 2.4333446078300162E-4 0.0 0.0 0.4752322019092022 0.0 3 2.4333446078300162E-4 0.0 0.0 0.604442800584976 0.0 4 2.4333446078300162E-4 0.0 0.0 0.7672335548488042 0.0 5 2.4333446078300162E-4 0.0 0.0 1.2765325812676265 0.0 6 2.4333446078300162E-4 0.0 0.0 1.6038174310207638 0.0 7 2.4333446078300162E-4 0.0 0.0 1.9938825716559154 0.0 8 2.4333446078300162E-4 0.0 0.0 2.9248802186116794 0.0 9 2.4333446078300162E-4 0.0 0.0 3.2541117440510807 0.0 10 2.4333446078300162E-4 0.0 0.0 4.0768255559584095 0.0 11 2.4333446078300162E-4 0.0 0.0 5.123893740707666 0.0 12 2.4333446078300162E-4 0.0 0.0 5.97872770143835 0.0 13 2.4333446078300162E-4 0.0 0.0 6.310392571485581 0.0 14 2.4333446078300162E-4 0.0 0.0 6.444956528298581 0.0 15 2.4333446078300162E-4 0.0 0.0 6.699241039816818 0.0 16 2.4333446078300162E-4 0.0 0.0 7.204403380402329 0.0 17 2.4333446078300162E-4 0.0 0.0 7.8380463162812655 0.0 18 2.4333446078300162E-4 0.0 0.0 8.574863063532195 0.0 19 2.4333446078300162E-4 0.0 0.0 8.979284937353544 0.0 20 2.4333446078300162E-4 0.0 0.0 9.39246685176308 0.0 21 2.4333446078300162E-4 0.0 0.0 9.956272797397295 0.0 22 2.4333446078300162E-4 0.0 0.0 10.500611986168868 0.0 23 2.4333446078300162E-4 0.0 0.0 11.02353774239154 0.0 24 2.4333446078300162E-4 0.0 0.0 11.436719656801076 0.0 25 2.4333446078300162E-4 0.0 0.0 11.802208016897145 0.0 26 2.4333446078300162E-4 0.0 0.0 12.149689626895272 0.0 27 2.4333446078300162E-4 0.0 0.0 12.486464520618945 0.0 28 2.4333446078300162E-4 0.0 0.0 12.866309613901212 0.0 29 2.4333446078300162E-4 0.0 0.0 13.23666466321294 0.0 30 2.4333446078300162E-4 0.0 0.0 13.660066624975363 0.0 31 2.4333446078300162E-4 0.0 0.0 14.071058529237852 0.0 32 2.4333446078300162E-4 0.0 0.0 14.446523602226023 0.0 33 2.4333446078300162E-4 0.0 0.0 14.839508756390572 0.0 34 2.4333446078300162E-4 0.0 0.0 15.201103765114112 0.0 35 2.4333446078300162E-4 0.0 0.0 15.603335628788413 0.0 36 2.4333446078300162E-4 0.0 0.0 16.002160810011752 0.0 37 2.4333446078300162E-4 0.0 0.0 16.384682582362633 0.0 38 2.4333446078300162E-4 0.0 0.0 16.777667736527178 0.0 39 2.4333446078300162E-4 0.0 0.0 17.153619478436916 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCCAA 20 7.0279907E-4 45.000004 28 TGCGGGT 35 1.2093733E-7 45.000004 4 AATATCG 20 7.0279907E-4 45.000004 12 TCGGACG 20 7.0279907E-4 45.000004 1 ACGGCGT 30 2.1620854E-6 45.000004 33 TACGAAT 30 2.1620854E-6 45.000004 12 CGGGATC 35 1.2093733E-7 45.000004 6 CATACGG 20 7.0279907E-4 45.000004 2 TTAACGG 40 6.7975634E-9 45.000004 2 ACTCGAA 20 7.0279907E-4 45.000004 16 ATAACGG 45 3.8380676E-10 45.000004 2 ATACGAG 20 7.0279907E-4 45.000004 2 TATCGCA 20 7.0279907E-4 45.000004 1 GTATCTC 25 3.8864164E-5 45.0 22 GTACGAA 25 3.8864164E-5 45.0 1 CGTTTTA 385 0.0 43.246754 1 AGGCGAT 195 0.0 41.53846 7 ACTAATC 65 0.0 41.53846 10 CGTTATT 210 0.0 40.714287 1 AATAGGC 45 1.9230356E-8 40.000004 4 >>END_MODULE