SRR2934561.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934561.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	447741
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCGTCTTCTGC	2776	0.6200012953917555	No Hit
CCTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCGTCTTCTGC	1797	0.401348100799346	No Hit
CTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCGTCTTCTGCT	1327	0.2963766999224998	No Hit
TCTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCGTCTTCTGC	1061	0.2369673538943273	No Hit
ACTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCGTCTTCTGC	706	0.15768044472139026	No Hit
GCCTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCGTCTTCTG	476	0.1063114613135719	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCC	461	0.10296131022175765	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTACACG	25	3.8869766E-5	45.000004	2
GCGAATG	30	2.162522E-6	45.000004	1
GTCCTCG	25	3.8869766E-5	45.000004	9
CGCATGG	35	1.2097007E-7	45.000004	2
CACGCCG	35	1.2097007E-7	45.000004	26
TTGAGCG	25	3.8869766E-5	45.000004	1
AACGGGC	25	3.8869766E-5	45.000004	4
CATAGCG	35	1.2097007E-7	45.000004	22
CTACGCG	30	2.162522E-6	45.000004	1
AGCGATC	25	3.8869766E-5	45.000004	17
GGACGGC	25	3.8869766E-5	45.000004	8
GTATCAC	30	2.162522E-6	45.000004	9
TTCGGCG	25	3.8869766E-5	45.000004	1
GGTTGCG	50	2.1827873E-11	45.000004	1
CGGTAGT	35	1.2097007E-7	45.000004	12
CGCCGGT	35	1.2097007E-7	45.000004	28
TACACGG	25	3.8869766E-5	45.000004	3
GCGTAAG	25	3.8869766E-5	45.000004	1
TGCAACG	25	3.8869766E-5	45.000004	1
CGGGTTC	20	7.028669E-4	45.0	6