##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934561.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 447741 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.95315595400019 33.0 31.0 34.0 30.0 34.0 2 32.0763008078331 33.0 31.0 34.0 30.0 34.0 3 32.13372463098086 33.0 31.0 34.0 30.0 34.0 4 35.735641810779 37.0 35.0 37.0 33.0 37.0 5 35.79629741301333 37.0 35.0 37.0 35.0 37.0 6 35.825412459435256 37.0 35.0 37.0 35.0 37.0 7 36.06265899258723 37.0 35.0 37.0 35.0 37.0 8 35.86356174663477 37.0 35.0 37.0 35.0 37.0 9 37.62912710696586 39.0 38.0 39.0 35.0 39.0 10 36.93163234995232 39.0 37.0 39.0 32.0 39.0 11 36.95407389539935 39.0 37.0 39.0 33.0 39.0 12 36.94103957421813 39.0 37.0 39.0 33.0 39.0 13 36.951366973317164 39.0 37.0 39.0 33.0 39.0 14 38.08193799540359 40.0 37.0 41.0 33.0 41.0 15 38.255763934953464 40.0 37.0 41.0 34.0 41.0 16 38.36794262754584 40.0 37.0 41.0 34.0 41.0 17 38.38297140534372 40.0 37.0 41.0 34.0 41.0 18 38.392586338977225 40.0 37.0 41.0 34.0 41.0 19 38.362015093547384 40.0 37.0 41.0 34.0 41.0 20 38.251428839440656 40.0 37.0 41.0 34.0 41.0 21 38.240288470343344 40.0 37.0 41.0 34.0 41.0 22 38.24957062230173 40.0 37.0 41.0 34.0 41.0 23 38.264769141088266 40.0 37.0 41.0 34.0 41.0 24 38.18032969953612 40.0 37.0 41.0 34.0 41.0 25 38.098612814104584 40.0 37.0 41.0 34.0 41.0 26 37.981761777456164 40.0 37.0 41.0 34.0 41.0 27 37.93286967242223 40.0 36.0 41.0 34.0 41.0 28 37.980035332926846 40.0 36.0 41.0 34.0 41.0 29 38.00105194744283 40.0 36.0 41.0 34.0 41.0 30 37.85084457309025 40.0 36.0 41.0 34.0 41.0 31 37.92345798128829 40.0 36.0 41.0 34.0 41.0 32 37.861051366749976 40.0 36.0 41.0 34.0 41.0 33 37.813244710669785 40.0 36.0 41.0 34.0 41.0 34 37.84475623183939 40.0 36.0 41.0 34.0 41.0 35 37.823697182076245 40.0 36.0 41.0 34.0 41.0 36 37.73128214749152 40.0 36.0 41.0 33.0 41.0 37 37.72005467446582 40.0 36.0 41.0 33.0 41.0 38 37.643378649710435 40.0 36.0 41.0 33.0 41.0 39 37.58056778360704 40.0 36.0 41.0 33.0 41.0 40 37.533158678789746 40.0 36.0 41.0 33.0 41.0 41 37.46879334257975 40.0 36.0 41.0 33.0 41.0 42 37.50101956264894 40.0 36.0 41.0 33.0 41.0 43 37.45566521716796 40.0 36.0 41.0 33.0 41.0 44 37.37643637728061 39.0 35.0 41.0 33.0 41.0 45 37.27901845039878 39.0 35.0 41.0 33.0 41.0 46 37.21489655850146 39.0 35.0 41.0 32.0 41.0 47 37.1951105661532 39.0 35.0 41.0 32.0 41.0 48 37.16203564114075 39.0 35.0 41.0 32.0 41.0 49 37.16750085428853 39.0 35.0 41.0 32.0 41.0 50 37.05210601664802 39.0 35.0 41.0 32.0 41.0 51 36.02386424294402 38.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 3.0 10 6.0 11 8.0 12 1.0 13 7.0 14 1.0 15 11.0 16 17.0 17 20.0 18 58.0 19 102.0 20 171.0 21 283.0 22 429.0 23 675.0 24 1041.0 25 1693.0 26 2296.0 27 2826.0 28 3388.0 29 4340.0 30 5681.0 31 7362.0 32 9819.0 33 14263.0 34 26054.0 35 37492.0 36 30834.0 37 46874.0 38 91719.0 39 160164.0 40 101.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.13364199392059 22.013396137499132 25.5759468085344 9.277015060045875 2 33.04142350153325 23.070257135263468 26.05658181850668 17.831737544696598 3 31.518444815194496 23.499746505234054 27.17664900020324 17.805159679368206 4 27.734114141881133 25.507157039449147 26.45792991930603 20.300798899363695 5 23.66837077685537 30.538860635948012 26.342014691529254 19.45075389566736 6 24.974483015850684 35.10042636256229 25.22574434773675 14.699346273850283 7 82.40880330369566 4.617178234738387 8.37761116359681 4.596407297969138 8 82.42332062509352 3.3354104270102582 8.060016840092823 6.181252107803395 9 77.58413904467092 5.4388586258573595 10.489323068470387 6.487679261001338 10 38.62590202818147 22.47839710904295 22.47549364476338 16.420207218012198 11 28.332674470285273 24.95728557357937 25.260362575685498 21.44967738044986 12 25.206983501622588 21.565145921414388 32.003100006476956 21.22477057048606 13 22.397323452621045 26.83493358883819 32.940918968778824 17.826823989761937 14 19.953053216033375 29.616452368668494 29.887814607105444 20.54267980819268 15 17.95926662959166 27.512557483009147 36.12021235491054 18.40796353248865 16 20.44284530565662 25.58465720137312 32.33208484369312 21.64041264927715 17 20.32134649272682 26.457259889087663 28.154223088794637 25.067170529390875 18 21.25045506218997 25.484376012024807 32.67380025505817 20.59136867072705 19 21.275022836863275 28.9448587464628 28.35121197299332 21.42890644368061 20 21.55978567966749 28.58728595326316 29.663801170766135 20.189127196303218 21 20.294098597180067 28.06064220162996 31.343566928201795 20.301692272988177 22 19.084917396441245 25.940219903917665 27.96572125402856 27.009141445612528 23 18.016442541558625 27.67760826013253 29.383728539490466 24.92222065881838 24 20.35127450914703 25.81179744539812 30.95249262408401 22.88443542137084 25 17.750217201462455 28.49325837928624 28.94753886733625 24.808985551915057 26 17.95680985212433 29.070601084108894 29.97089835418244 23.001690709584334 27 19.77504852135498 29.0951688587822 28.604483395534473 22.52529922432835 28 16.73556810745498 26.71298808909615 30.7519302453874 25.79951355806147 29 19.107028393647223 24.69195360710768 29.53828217652616 26.662735822718936 30 20.412470602424168 28.158466613510935 28.085209976303265 23.343852807761632 31 20.500914591248065 28.420895115703054 25.03232895803601 26.045861335012876 32 21.366146946560622 28.665679488811612 25.436803866521046 24.531369698106715 33 20.576404662516946 28.75256007379266 26.870668533817543 23.800366729872852 34 19.652209647988457 25.003070971834163 27.755778452274864 27.588940927902517 35 19.185421929195673 28.352775376836163 26.268981397727703 26.19282129624046 36 20.368918638230586 29.605731885174684 26.596849517913256 23.42849995868147 37 20.274444377441423 28.746529801827396 27.96817803149589 23.010847789235296 38 19.905257727123495 29.275630330927925 26.850344283860533 23.968767658088048 39 22.240089694711898 25.843512209067292 29.508577503512072 22.40782059270873 40 22.43618520528609 24.63098085723666 29.55972314351377 23.373110793963477 41 18.25832345038761 29.21577429808751 26.06975907946782 26.45614317205706 42 19.685041128688237 28.26723485229184 26.679933264990254 25.367790754029674 43 21.008797496767105 26.49902510603228 27.88911446572907 24.60306293147154 44 20.402196805742605 24.9747063592568 27.06341389329992 27.559682941700668 45 21.910658170683497 23.515157200256397 26.886525915652133 27.687658713407977 46 22.76539338590837 26.135868727679618 27.787493215944036 23.31124467046797 47 19.138743157316394 26.919804083164152 29.438894360802337 24.502558398717113 48 19.294413511382697 25.862496398587574 28.548424200598117 26.294665889431613 49 21.47134169084359 22.918606962507344 30.743443195954807 24.866608150694265 50 20.70505046444261 22.492691087034693 29.625162761507212 27.177095687015484 51 19.635682235935505 23.417556131781545 26.71946504787366 30.22729658440929 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 148.0 1 235.5 2 323.0 3 618.5 4 914.0 5 681.5 6 449.0 7 451.5 8 454.0 9 514.0 10 574.0 11 559.0 12 544.0 13 561.5 14 579.0 15 581.0 16 583.0 17 609.5 18 636.0 19 662.0 20 688.0 21 917.0 22 1146.0 23 1184.0 24 1222.0 25 1610.5 26 2376.0 27 2753.0 28 3363.0 29 3973.0 30 4891.5 31 5810.0 32 6725.5 33 7641.0 34 8512.0 35 9383.0 36 11132.0 37 12881.0 38 14705.0 39 16529.0 40 18498.0 41 20467.0 42 24285.5 43 28104.0 44 31962.5 45 35821.0 46 42861.0 47 49901.0 48 56684.0 49 63467.0 50 62977.0 51 62487.0 52 52157.0 53 41827.0 54 34246.5 55 26666.0 56 21925.5 57 17185.0 58 14577.5 59 11970.0 60 10113.0 61 8256.0 62 6943.0 63 5630.0 64 4317.0 65 3004.0 66 2374.0 67 1744.0 68 1373.5 69 1003.0 70 765.0 71 527.0 72 359.0 73 191.0 74 124.0 75 90.5 76 124.0 77 96.0 78 68.0 79 37.0 80 6.0 81 3.0 82 0.0 83 0.0 84 0.0 85 2.5 86 5.0 87 3.0 88 1.0 89 0.5 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 447741.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.04297946723658 #Duplication Level Percentage of deduplicated Percentage of total 1 69.57781323426866 26.46947320246504 2 13.570419089724572 10.325183495843742 3 5.040063827775019 5.752171341408205 4 2.5464268127990257 3.87494651816536 5 1.5039220705577867 2.86068382252769 6 1.071168320067848 2.445026064377726 7 0.7442671214805838 1.9819897174437586 8 0.6339701910965927 1.9294491970182177 9 0.4980466590527425 1.7052460941662333 >10 4.663947166113055 35.01890080026116 >50 0.09601894128217196 2.450113042119456 >100 0.05097301821152337 3.4580281257080765 >500 5.927095140874811E-4 0.15919195727372862 >1k 0.0023708380563499244 1.569596621221565 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCGTCTTCTGC 2776 0.6200012953917555 No Hit CCTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCGTCTTCTGC 1797 0.401348100799346 No Hit CTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCGTCTTCTGCT 1327 0.2963766999224998 No Hit TCTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCGTCTTCTGC 1061 0.2369673538943273 No Hit ACTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCGTCTTCTGC 706 0.15768044472139026 No Hit GCCTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCCGTCTTCTG 476 0.1063114613135719 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCACGTGAATCGTATGCC 461 0.10296131022175765 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.31000064769587776 0.0 2 0.0 0.0 0.0 1.7918841473083769 0.0 3 0.0 0.0 0.0 2.4898322914363438 0.0 4 0.0 0.0 0.0 3.4973343964479464 0.0 5 0.0 0.0 0.0 6.061316698716445 0.0 6 0.0 0.0 0.0 7.392666742603425 0.0 7 0.0 0.0 0.0 8.635796141072628 0.0 8 0.0 0.0 0.0 10.695692375726145 0.0 9 0.0 0.0 0.0 11.375549703958315 0.0 10 0.0 0.0 0.0 13.292059471882181 0.0 11 0.0 0.0 0.0 16.094125845075613 0.0 12 0.0 0.0 0.0 17.93581557194896 0.0 13 0.0 0.0 0.0 18.720420957651857 0.0 14 0.0 0.0 0.0 18.97101225931956 0.0 15 0.0 0.0 0.0 19.548354964142217 0.0 16 0.0 0.0 0.0 20.91141977169837 0.0 17 0.0 0.0 0.0 22.657741864158073 0.0 18 0.0 0.0 0.0 24.40518067364838 0.0 19 0.0 0.0 0.0 25.47745236643506 0.0 20 0.0 0.0 0.0 26.43983910341023 0.0 21 0.0 0.0 0.0 27.746398029217783 0.0 22 0.0 0.0 0.0 29.144527751534927 0.0 23 2.2334340612094938E-4 0.0 0.0 30.61747751490259 0.0 24 2.2334340612094938E-4 0.0 0.0 31.614259136420387 0.0 25 2.2334340612094938E-4 0.0 0.0 32.564808672871145 0.0 26 2.2334340612094938E-4 0.0 0.0 33.41731045403481 0.0 27 4.4668681224189875E-4 0.0 0.0 34.2530614797394 0.0 28 4.4668681224189875E-4 0.0 0.0 35.17435302998832 0.0 29 4.4668681224189875E-4 0.0 0.0 36.041372132549846 0.0 30 4.4668681224189875E-4 0.0 0.0 36.98343461956801 0.0 31 6.700302183628482E-4 0.0 0.0 37.895122403353724 0.0 32 6.700302183628482E-4 0.0 0.0 38.7786689179682 0.0 33 6.700302183628482E-4 0.0 0.0 39.59856256183821 0.0 34 6.700302183628482E-4 0.0 0.0 40.39455846125327 0.0 35 6.700302183628482E-4 0.0 0.0 41.22204578093139 0.0 36 6.700302183628482E-4 0.0 0.0 42.00397104576083 0.0 37 6.700302183628482E-4 0.0 0.0 42.76289193975982 0.0 38 6.700302183628482E-4 0.0 0.0 43.569608322668685 0.0 39 6.700302183628482E-4 0.0 0.0 44.3479600930002 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACACG 25 3.8869766E-5 45.000004 2 GCGAATG 30 2.162522E-6 45.000004 1 GTCCTCG 25 3.8869766E-5 45.000004 9 CGCATGG 35 1.2097007E-7 45.000004 2 CACGCCG 35 1.2097007E-7 45.000004 26 TTGAGCG 25 3.8869766E-5 45.000004 1 AACGGGC 25 3.8869766E-5 45.000004 4 CATAGCG 35 1.2097007E-7 45.000004 22 CTACGCG 30 2.162522E-6 45.000004 1 AGCGATC 25 3.8869766E-5 45.000004 17 GGACGGC 25 3.8869766E-5 45.000004 8 GTATCAC 30 2.162522E-6 45.000004 9 TTCGGCG 25 3.8869766E-5 45.000004 1 GGTTGCG 50 2.1827873E-11 45.000004 1 CGGTAGT 35 1.2097007E-7 45.000004 12 CGCCGGT 35 1.2097007E-7 45.000004 28 TACACGG 25 3.8869766E-5 45.000004 3 GCGTAAG 25 3.8869766E-5 45.000004 1 TGCAACG 25 3.8869766E-5 45.000004 1 CGGGTTC 20 7.028669E-4 45.0 6 >>END_MODULE