##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934557.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 300436 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.01438908785898 33.0 31.0 34.0 30.0 34.0 2 32.14579810675152 33.0 31.0 34.0 30.0 34.0 3 32.19367186355829 34.0 31.0 34.0 30.0 34.0 4 35.78642040234859 37.0 35.0 37.0 33.0 37.0 5 35.833854797694016 37.0 35.0 37.0 35.0 37.0 6 35.84536806507875 37.0 35.0 37.0 35.0 37.0 7 36.03875367798799 37.0 35.0 37.0 35.0 37.0 8 35.80458067608409 37.0 35.0 37.0 35.0 37.0 9 37.52594562569066 39.0 37.0 39.0 35.0 39.0 10 37.226953494255014 39.0 37.0 39.0 34.0 39.0 11 37.12645621696468 39.0 37.0 39.0 34.0 39.0 12 36.80630483697027 39.0 35.0 39.0 33.0 39.0 13 36.650737594695705 39.0 35.0 39.0 33.0 39.0 14 37.681579437883606 40.0 36.0 41.0 33.0 41.0 15 37.903839752892466 40.0 36.0 41.0 33.0 41.0 16 38.06286530242714 40.0 36.0 41.0 34.0 41.0 17 38.08128187034843 40.0 36.0 41.0 34.0 41.0 18 38.060428843414236 40.0 36.0 41.0 34.0 41.0 19 38.04180923724188 40.0 36.0 41.0 34.0 41.0 20 37.91999960058049 40.0 36.0 41.0 34.0 41.0 21 37.88811260967394 40.0 35.0 41.0 34.0 41.0 22 37.867106471927464 40.0 35.0 41.0 34.0 41.0 23 37.889983224380565 40.0 35.0 41.0 34.0 41.0 24 37.80307619592858 40.0 35.0 41.0 34.0 41.0 25 37.71187873623667 39.0 35.0 41.0 34.0 41.0 26 37.57075716625172 39.0 35.0 41.0 33.0 41.0 27 37.50485294705029 39.0 35.0 41.0 33.0 41.0 28 37.544069285971055 39.0 35.0 41.0 33.0 41.0 29 37.59002915762425 39.0 35.0 41.0 33.0 41.0 30 37.478727582579985 39.0 35.0 41.0 33.0 41.0 31 37.467826758444396 39.0 35.0 41.0 33.0 41.0 32 37.403137440253495 39.0 35.0 41.0 33.0 41.0 33 37.373344073280165 39.0 35.0 41.0 33.0 41.0 34 37.298988802939725 39.0 35.0 41.0 33.0 41.0 35 37.268473152351916 39.0 35.0 41.0 33.0 41.0 36 37.17687960164561 39.0 35.0 41.0 33.0 41.0 37 37.11601805376186 39.0 35.0 41.0 33.0 41.0 38 37.04239838101959 39.0 35.0 41.0 32.0 41.0 39 37.01028172389461 39.0 35.0 41.0 32.0 41.0 40 36.88280365868271 39.0 35.0 41.0 32.0 41.0 41 36.81014924975702 39.0 35.0 41.0 32.0 41.0 42 36.811810169220735 39.0 35.0 41.0 32.0 41.0 43 36.73172988589916 39.0 35.0 41.0 32.0 41.0 44 36.62823363378556 38.0 35.0 41.0 32.0 41.0 45 36.53102491046346 38.0 35.0 41.0 32.0 41.0 46 36.477735690796045 38.0 35.0 40.0 31.0 41.0 47 36.44593856927931 38.0 35.0 40.0 31.0 41.0 48 36.413479077074655 38.0 35.0 40.0 31.0 41.0 49 36.40313411175758 38.0 35.0 40.0 31.0 41.0 50 36.24868857260781 38.0 35.0 40.0 31.0 41.0 51 35.26237534782782 37.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 4.0 10 5.0 11 9.0 12 4.0 13 3.0 14 7.0 15 5.0 16 10.0 17 37.0 18 63.0 19 106.0 20 173.0 21 271.0 22 419.0 23 637.0 24 943.0 25 1326.0 26 1832.0 27 2290.0 28 2818.0 29 3463.0 30 4258.0 31 5492.0 32 7412.0 33 11057.0 34 23099.0 35 32463.0 36 21757.0 37 31408.0 38 56790.0 39 92177.0 40 95.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.31369076941512 20.463260062043165 22.33886751254843 10.88418165599329 2 33.933350197712656 23.162004553382417 22.846795989828117 20.057849259076807 3 33.32989388755009 23.862985793979416 24.978697626116713 17.82842269235378 4 30.466721697799198 25.486626103396397 22.86010997350517 21.18654222529923 5 24.97769907734093 29.72346855902755 24.03540188259729 21.263430481034227 6 27.206792794472033 33.485001797387795 24.42982864903008 14.878376759110093 7 80.12488516689078 5.922725638738367 8.826838328296208 5.125550866074638 8 79.06908626130024 3.8813590914537537 10.39788840218882 6.651666245057183 9 72.75093530735332 6.747859777123913 12.541439774194837 7.959765141327936 10 44.03167396716772 22.353180045001263 19.36618780705375 14.248958180777272 11 34.676270486892385 21.541027040700847 24.007442516875475 19.775259955531293 12 30.863811260967395 20.571436179419244 29.77572594495999 18.78902661465337 13 24.389886697998907 26.813031727223102 29.99241102930408 18.80467054547391 14 20.119093583991265 28.7608675391764 30.111238333621802 21.008800543210533 15 17.342795137733162 23.984475895032553 37.674579610965395 20.99814935626889 16 21.12762784752826 23.537126043483468 33.35053056224953 21.98471554673874 17 21.36428390738793 23.97815175278595 26.50980574897815 28.147758590847964 18 22.544568560358947 23.38068673527806 31.88033391471062 22.194410789652373 19 23.802074318656885 24.98901596346643 27.675445019904405 23.53346469797228 20 25.477306314822457 26.404292428337484 27.60787655274335 20.510524704096714 21 23.861987245203636 26.538763663475752 29.460850230997615 20.138398860322997 22 21.530708703351127 25.15344366187807 26.732814975568843 26.58303265920196 23 20.23359384361395 26.531773822045295 28.680317937930205 24.55431439641055 24 22.73462567734892 23.384015231197328 30.99561969937025 22.885739392083504 25 20.21295716891451 25.5585216152525 28.868377957368622 25.360143258464362 26 19.817864703297875 26.200588478078522 27.42381072840805 26.557736090215556 27 21.48444261007336 25.85642200002663 29.413252739352142 23.24588265054787 28 16.713709408992266 26.239531880333917 30.64413053029597 26.402628180377853 29 18.54671211173095 23.69356535168888 31.054201227549292 26.70552130903088 30 21.665845637673247 26.046479117016602 29.685190855956012 22.60248438935414 31 23.414304544062627 27.713389873384013 25.410070697253325 23.46223488530003 32 22.90737461555872 25.618101692207322 26.873943202545636 24.60058048968832 33 24.366254376972137 26.214235311347505 26.080096925801172 23.33941338587919 34 21.317684964518232 24.301015856954557 28.679652238746357 25.701646939780854 35 20.079151632960098 23.347401776085423 29.158289951936517 27.41515663901796 36 24.994008707345326 25.273269514971574 27.072654408925693 22.660067368757407 37 21.828941937717182 26.31675298566084 29.56037225898361 22.293932817638364 38 20.451277476733814 28.030595534489876 26.893914178061216 24.624212810715093 39 24.09298486200056 26.1107190882584 27.56593750416062 22.230358545580422 40 25.38643837622655 22.51993769055639 27.727036706652996 24.36658722656406 41 20.440293440200243 22.562209588731044 26.552077647152807 30.445419323915907 42 22.80652118920502 21.898174652837877 28.109148038184507 27.186156119772598 43 23.197619459718545 22.70500206366747 29.09538137906243 25.00199709755156 44 20.515517447975608 24.26773089776192 28.39473298805736 26.822018666205118 45 21.3689438016749 23.093104687853653 26.85397222703005 28.683979283441396 46 23.15368331358426 24.15090069099575 27.97301255508661 24.72240344033338 47 20.02889134457921 22.949646513733374 31.256573779440544 25.764888362246868 48 20.79111691009067 21.190869269994277 30.829527752998974 27.188486066916084 49 22.992251261499955 20.371060725079552 32.274760681143405 24.36192733227709 50 21.456483244351542 22.600820141394507 30.173148357720116 25.769548256533838 51 19.514638725052926 22.508620804430894 26.66890785391897 31.307832616597214 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 139.0 1 313.0 2 487.0 3 736.5 4 986.0 5 668.0 6 350.0 7 359.5 8 369.0 9 410.5 10 452.0 11 490.5 12 529.0 13 560.0 14 591.0 15 605.5 16 620.0 17 615.0 18 610.0 19 575.0 20 540.0 21 549.0 22 558.0 23 661.0 24 764.0 25 946.5 26 1397.5 27 1666.0 28 1867.5 29 2069.0 30 2761.5 31 3454.0 32 3682.5 33 3911.0 34 4765.5 35 5620.0 36 6156.5 37 6693.0 38 7555.5 39 8418.0 40 10122.0 41 11826.0 42 13854.5 43 15883.0 44 18585.0 45 21287.0 46 23890.5 47 26494.0 48 30864.0 49 35234.0 50 36424.5 51 37615.0 52 31689.0 53 25763.0 54 22623.0 55 19483.0 56 16674.0 57 13865.0 58 12657.5 59 11450.0 60 11137.5 61 10825.0 62 9821.0 63 8817.0 64 7879.5 65 6942.0 66 5870.5 67 4799.0 68 4225.0 69 3651.0 70 2975.5 71 2300.0 72 1990.5 73 1681.0 74 1366.0 75 951.5 76 852.0 77 578.5 78 305.0 79 271.0 80 237.0 81 171.5 82 106.0 83 57.0 84 8.0 85 5.5 86 3.0 87 2.0 88 1.0 89 1.5 90 2.0 91 1.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 300436.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.343993396264096 #Duplication Level Percentage of deduplicated Percentage of total 1 69.02637563932367 22.3258863784633 2 12.884237391044836 8.334553781837064 3 4.991098350364814 4.8429615625291245 4 2.475996418758297 3.2033444726996763 5 1.3831002438949092 2.23674925774541 6 0.9827832834223498 1.9072281617382738 7 0.704928323711319 1.5960137932870895 8 0.5289535158943328 1.368677522001358 9 0.47029524662200406 1.3690103715932844 >10 6.377285871589845 45.284519831178685 >50 0.11525835365790908 2.5016975329188247 >100 0.05454189949883198 3.118134977166518 >500 0.0020581848867483768 0.3994195103116803 >1k 0.003087277330122565 1.5118028465297102 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCTTCTGC 1881 0.6260900824135589 No Hit CCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCTTCTGC 1580 0.5259023552437124 No Hit CTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCTTCTGCT 1081 0.3598104088724387 No Hit TCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCTTCTGC 642 0.21368943801674897 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 558 0.18573007229493135 No Hit ACTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCTTCTGC 472 0.15710500738926092 No Hit GCCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCTTCTG 375 0.12481859697240011 No Hit GGCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCTTCTG 341 0.11350171084690251 No Hit CGCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCTTCTG 337 0.1121703124791969 No Hit GGCCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCTTCT 303 0.1008534263536993 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCC 302 0.10052057676177288 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.656991838528006E-4 0.0 0.0 0.3707944454060099 0.0 2 9.985487757792008E-4 0.0 0.0 1.9578212997110866 0.0 3 9.985487757792008E-4 0.0 0.0 2.725705308285292 0.0 4 9.985487757792008E-4 0.0 0.0 3.646700129145642 0.0 5 9.985487757792008E-4 0.0 0.0 6.245256893315049 0.0 6 9.985487757792008E-4 0.0 0.0 7.4321985381245925 0.0 7 9.985487757792008E-4 0.0 0.0 8.63445126416275 0.0 8 9.985487757792008E-4 0.0 0.0 10.415196580968992 0.0 9 9.985487757792008E-4 0.0 0.0 11.027306980521642 0.0 10 9.985487757792008E-4 0.0 0.0 12.422945319469038 0.0 11 9.985487757792008E-4 0.0 0.0 14.856075836451025 0.0 12 0.0013313983677056011 0.0 0.0 16.556604401603003 0.0 13 0.0013313983677056011 0.0 0.0 17.2336204715813 0.0 14 0.0013313983677056011 0.0 0.0 17.519871120638005 0.0 15 0.0013313983677056011 0.0 0.0 18.120997483657085 0.0 16 0.0013313983677056011 0.0 0.0 19.305609181323145 0.0 17 0.0013313983677056011 0.0 0.0 20.6200322198405 0.0 18 0.0013313983677056011 0.0 0.0 21.94310934774794 0.0 19 0.0013313983677056011 0.0 0.0 22.752599555312944 0.0 20 0.0013313983677056011 0.0 0.0 23.532798998788426 0.0 21 0.0013313983677056011 0.0 0.0 24.528019278648365 0.0 22 0.0013313983677056011 0.0 0.0 25.485960404212545 0.0 23 0.0013313983677056011 0.0 0.0 26.53210667163722 0.0 24 0.0013313983677056011 0.0 0.0 27.32062735491086 0.0 25 0.0013313983677056011 0.0 0.0 28.026601339386758 0.0 26 0.0013313983677056011 0.0 0.0 28.721591287329083 0.0 27 0.0013313983677056011 0.0 0.0 29.357666857500433 0.0 28 0.0013313983677056011 0.0 0.0 29.97576854970776 0.0 29 0.0013313983677056011 0.0 0.0 30.660440160300364 0.0 30 0.0013313983677056011 0.0 0.0 31.477585908479675 0.0 31 0.0013313983677056011 0.0 0.0 32.18788693765062 0.0 32 0.0013313983677056011 0.0 0.0 32.814975568839955 0.0 33 0.0013313983677056011 0.0 0.0 33.48533464697972 0.0 34 0.0013313983677056011 0.0 0.0 34.16168501777417 0.0 35 0.0013313983677056011 0.0 0.0 34.94654435553662 0.0 36 0.0013313983677056011 0.0 0.0 35.56331464937624 0.0 37 0.0013313983677056011 0.0 0.0 36.19473032526062 0.0 38 0.0013313983677056011 0.0 0.0 36.881066183812855 0.0 39 0.0013313983677056011 0.0 0.0 37.627647818503775 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGAAAT 20 7.0249586E-4 45.000004 19 CTCACGT 20 7.0249586E-4 45.000004 14 ATTAGGT 20 7.0249586E-4 45.000004 24 AGTCAAG 20 7.0249586E-4 45.000004 30 TGCTTAA 20 7.0249586E-4 45.000004 9 TAGACGG 30 2.16013E-6 45.000004 2 GGGTCGA 20 7.0249586E-4 45.000004 7 CGCATTG 30 2.16013E-6 45.000004 27 CGTGACC 20 7.0249586E-4 45.000004 18 TTAGACG 20 7.0249586E-4 45.000004 1 CGGCAGG 60 0.0 45.000004 2 TTCGTAG 20 7.0249586E-4 45.000004 1 GTCTAGT 20 7.0249586E-4 45.000004 10 GCGTTAG 20 7.0249586E-4 45.000004 1 ATCCGAG 20 7.0249586E-4 45.000004 31 ACGATAA 20 7.0249586E-4 45.000004 28 GCTTAAA 20 7.0249586E-4 45.000004 10 ACGTGAC 20 7.0249586E-4 45.000004 17 TCATGCA 40 6.7866495E-9 45.000004 24 CGGTGTC 20 7.0249586E-4 45.000004 11 >>END_MODULE