SRR2934556.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934556.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	417439
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTCTGC	2523	0.6043996847443578	No Hit
CCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTCTGC	1908	0.45707276991368795	No Hit
CTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTCTGCT	1289	0.3087876312467211	No Hit
TCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTCTGC	812	0.19451943876829908	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	608	0.14565002311715006	No Hit
ACTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTCTGC	564	0.13510956091788262	No Hit
GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG	553	0.13247444536806577	No Hit
GCCTGTCTCTTATACACATCTGACGCGCTCCTATTCGTATGCCGTCTTCTG	469	0.11235174480582792	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTACCA	30	2.1621672E-6	45.000004	9
TAGACGG	25	3.886522E-5	45.000004	2
TACGGGT	25	3.886522E-5	45.000004	4
CATAGCG	30	2.1621672E-6	45.000004	1
TACGACG	25	3.886522E-5	45.000004	1
GTATCCG	30	2.1621672E-6	45.000004	1
CGTAAGG	25	3.886522E-5	45.000004	2
GAACCCG	30	2.1621672E-6	45.000004	20
ATACGGA	30	2.1621672E-6	45.000004	4
AGATCGG	20	7.028119E-4	45.0	1
TAAGTTC	45	3.8380676E-10	45.0	42
CGACAGG	20	7.028119E-4	45.0	2
CACCTTA	20	7.028119E-4	45.0	25
TAGCAAT	20	7.028119E-4	45.0	38
CGTAGTT	20	7.028119E-4	45.0	15
AGTTGCG	20	7.028119E-4	45.0	1
ACGTGAT	20	7.028119E-4	45.0	19
CGGTGAA	20	7.028119E-4	45.0	28
CATACGT	20	7.028119E-4	45.0	17
TTAACGG	20	7.028119E-4	45.0	2