##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934555.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1166559 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.24482173640596 33.0 31.0 34.0 30.0 34.0 2 32.3566754874807 34.0 31.0 34.0 30.0 34.0 3 32.411734854387994 34.0 31.0 34.0 30.0 34.0 4 35.944190563872034 37.0 35.0 37.0 35.0 37.0 5 35.97091017256735 37.0 35.0 37.0 35.0 37.0 6 35.989835919143395 37.0 35.0 37.0 35.0 37.0 7 36.182283965063064 37.0 36.0 37.0 35.0 37.0 8 35.95553761104239 37.0 36.0 37.0 35.0 37.0 9 37.69450580725021 39.0 38.0 39.0 35.0 39.0 10 37.30788241314841 39.0 37.0 39.0 34.0 39.0 11 37.18295345541888 39.0 37.0 39.0 34.0 39.0 12 37.171778709863794 39.0 37.0 39.0 34.0 39.0 13 37.202456969600334 39.0 37.0 39.0 34.0 39.0 14 38.45745907408026 40.0 38.0 41.0 34.0 41.0 15 38.58549460421633 40.0 38.0 41.0 34.0 41.0 16 38.65649572803433 40.0 38.0 41.0 35.0 41.0 17 38.60876475171852 40.0 38.0 41.0 34.0 41.0 18 38.59859724197405 40.0 38.0 41.0 35.0 41.0 19 38.5819097019525 40.0 38.0 41.0 34.0 41.0 20 38.473251674368804 40.0 38.0 41.0 34.0 41.0 21 38.47256932568349 40.0 38.0 41.0 34.0 41.0 22 38.450585011131025 40.0 38.0 41.0 34.0 41.0 23 38.438631908030366 40.0 38.0 41.0 34.0 41.0 24 38.350698078708405 40.0 37.0 41.0 34.0 41.0 25 38.26390264015794 40.0 37.0 41.0 34.0 41.0 26 38.12674369663257 40.0 37.0 41.0 34.0 41.0 27 38.110500197589666 40.0 37.0 41.0 34.0 41.0 28 38.121564361511076 40.0 37.0 41.0 34.0 41.0 29 38.13792958607323 40.0 37.0 41.0 34.0 41.0 30 38.034561475244715 40.0 37.0 41.0 34.0 41.0 31 38.06921553046181 40.0 37.0 41.0 34.0 41.0 32 38.01158964098687 40.0 37.0 41.0 34.0 41.0 33 37.985080908895306 40.0 37.0 41.0 34.0 41.0 34 37.9188373669913 40.0 37.0 41.0 34.0 41.0 35 37.88875573374343 40.0 37.0 41.0 34.0 41.0 36 37.82678887223021 40.0 37.0 41.0 33.0 41.0 37 37.804683689380475 40.0 36.0 41.0 33.0 41.0 38 37.73723146450372 40.0 36.0 41.0 33.0 41.0 39 37.659209692780216 40.0 36.0 41.0 33.0 41.0 40 37.542564928134794 40.0 36.0 41.0 33.0 41.0 41 37.47361599370456 40.0 35.0 41.0 33.0 41.0 42 37.482496813277336 40.0 35.0 41.0 33.0 41.0 43 37.45923952410465 40.0 35.0 41.0 33.0 41.0 44 37.37774771786082 40.0 35.0 41.0 33.0 41.0 45 37.238165407836206 39.0 35.0 41.0 33.0 41.0 46 37.15792085955361 39.0 35.0 41.0 33.0 41.0 47 37.11618015033959 39.0 35.0 41.0 33.0 41.0 48 37.090338336937954 39.0 35.0 41.0 33.0 41.0 49 37.06874577282418 39.0 35.0 41.0 33.0 41.0 50 36.94956620282386 39.0 35.0 41.0 32.0 41.0 51 36.07462288662639 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 12.0 9 16.0 10 13.0 11 16.0 12 25.0 13 15.0 14 28.0 15 38.0 16 63.0 17 111.0 18 185.0 19 319.0 20 565.0 21 905.0 22 1455.0 23 2125.0 24 3028.0 25 4382.0 26 6055.0 27 7611.0 28 8758.0 29 10813.0 30 13619.0 31 17327.0 32 23160.0 33 32867.0 34 62877.0 35 83820.0 36 78642.0 37 118640.0 38 228641.0 39 459917.0 40 510.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.18434129778262 20.795947740320038 23.747191526532305 10.272519435365036 2 33.02996247939453 23.37764313678091 24.424225435661633 19.16816894816293 3 33.09108240560486 24.967446995822755 24.695021854874035 17.24644874369835 4 28.998361848822046 26.071205999867985 25.108031398326187 19.822400752983775 5 25.978883194077625 30.58242232068845 23.110189883237798 20.328504601996126 6 27.472935359463175 34.942510408817725 22.601600090522638 14.982954141196458 7 85.16860270247797 4.6898613786358 6.633869354228976 3.5076665646572525 8 85.61555823580291 4.44469589622128 6.20405826023373 3.735687607742086 9 79.30503300733182 6.988587803960194 8.2797355298789 5.426643658829086 10 38.71437278354545 33.56178298740141 14.808252304426953 12.915591924626188 11 27.602461598598953 25.730117379403872 27.61677720543925 19.050643816557926 12 26.72286613878938 23.87397465537534 28.517031714641096 20.886127491194188 13 23.84397188654839 25.82098290785121 30.194015047674398 20.141030157926004 14 20.35456414977725 27.29849068928361 29.573214899546446 22.773730261392693 15 20.332447823041953 27.030694546953903 30.923853829939162 21.71300380006498 16 23.261661004715577 27.712614621292193 28.97273091202417 20.05299346196806 17 22.298572125370427 26.457298773572536 28.514545770938287 22.729583330118754 18 23.786623736990585 25.236614693298836 28.810458793768685 22.166302775941894 19 22.65680518516423 27.52299712230586 27.151648566424846 22.668549126105066 20 25.416888472850495 26.622999779693956 28.53871943039315 19.421392317062402 21 24.39713722152073 27.800136984070246 27.992754759939274 19.809971034469754 22 24.503347023168136 24.617186100317255 27.712700343488844 23.16676653302576 23 22.61951602962216 27.80793770396525 28.326471271491627 21.24607499492096 24 22.225451091629314 25.418517194586816 30.29482435093296 22.061207362850915 25 21.437321215643614 28.437652960544646 27.793450652731664 22.331575171080072 26 21.774980948241797 27.797993929154035 27.57271599636195 22.85430912624222 27 22.031633205007207 27.446704367288753 27.84951296933974 22.672149458364302 28 18.929432630497043 28.57146530951285 28.671674557394866 23.82742750259524 29 20.71639754183029 26.02448740269459 28.361445927724187 24.89766912775093 30 21.551503181579328 27.20171032926753 28.44656806899608 22.80021842015706 31 21.724061963432625 28.295439836304894 26.311142428286953 23.66935577197553 32 21.51421402603726 27.54648500418753 27.316663794973078 23.622637174802133 33 21.59967905609575 27.256143924139288 26.702292811593754 24.44188420817121 34 20.092082783639746 27.193738164979226 28.541633985079194 24.172545066301833 35 20.00541764282818 27.964980768225185 28.293125336995384 23.736476251951252 36 20.533894985165773 29.795835444242424 25.421088860486268 24.249180710105534 37 20.31564627249886 28.52380376817632 27.575459106654698 23.585090852670117 38 20.314274717352486 28.013928142511435 28.05198879782334 23.619808342312734 39 22.520764059083167 26.307627818224365 27.53405528567351 23.63755283701896 40 23.21948568396455 26.841591381147463 27.939178387034 21.99974454785399 41 19.292123244516564 27.70772845608323 27.405900601684095 25.594247697716106 42 20.25992684467738 26.898425197525373 27.26668775432704 25.574960203470205 43 21.474010315809146 25.93876520604616 27.584974270482675 25.00225020766202 44 21.05388583003517 26.077463720223328 27.231541653701186 25.63710879604032 45 21.93673873331739 25.251273188925722 27.022465216075652 25.789522861681235 46 21.68540125274418 27.180536946695366 26.229877785864236 24.904184014696213 47 19.511572067936555 27.257086868302416 29.479777705199652 23.751563358561377 48 20.398539636657897 26.161300028545494 28.997504626855562 24.442655707941046 49 21.973685000072866 25.88158850088165 28.426594797176996 23.718131701868487 50 20.021962026781328 25.913648602428168 29.31621975399444 24.748169616796066 51 20.05633662763735 25.212698200433927 27.11590241042245 27.615062761506277 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 275.0 1 829.5 2 1384.0 3 3210.5 4 5037.0 5 3328.0 6 1619.0 7 1521.0 8 1423.0 9 1468.5 10 1514.0 11 1533.0 12 1552.0 13 1575.5 14 1599.0 15 1633.0 16 1667.0 17 1682.0 18 1697.0 19 1902.5 20 2108.0 21 2496.5 22 2885.0 23 3402.0 24 3919.0 25 4959.0 26 8016.5 27 10034.0 28 12331.5 29 14629.0 30 17753.5 31 20878.0 32 23930.5 33 26983.0 34 30877.5 35 34772.0 36 38172.0 37 41572.0 38 44990.0 39 48408.0 40 52529.0 41 56650.0 42 61736.5 43 66823.0 44 73463.0 45 80103.0 46 90156.0 47 100209.0 48 105063.0 49 109917.0 50 110578.0 51 111239.0 52 101027.0 53 90815.0 54 82355.5 55 73896.0 56 66327.5 57 58759.0 58 52324.5 59 45890.0 60 43162.0 61 40434.0 62 36097.0 63 31760.0 64 27419.0 65 23078.0 66 18966.5 67 14855.0 68 12726.5 69 10598.0 70 8905.0 71 7212.0 72 6074.5 73 4937.0 74 4539.5 75 3648.0 76 3154.0 77 2195.5 78 1237.0 79 888.5 80 540.0 81 392.0 82 244.0 83 161.0 84 78.0 85 47.5 86 17.0 87 14.5 88 12.0 89 7.5 90 3.0 91 2.5 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1166559.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.42134166924501 #Duplication Level Percentage of deduplicated Percentage of total 1 70.32943683323991 19.285275168098565 2 11.162822376332425 6.1219913274900986 3 4.124879162342296 3.393291625648118 4 1.9976397978977687 2.1911185372094506 5 1.208680352480745 1.6571818457139003 6 0.8497984569952547 1.3981568303558456 7 0.6362842334305038 1.2213437154556048 8 0.5294941458695188 1.1615551908602504 9 0.4843664571389927 1.1953780302897035 >10 8.379274357782979 54.13516372570646 >50 0.23956382566555 4.0496804136551665 >100 0.05176306084802837 2.5252561444449073 >500 0.0034719126177056446 0.5743427965214807 >1k 0.0025250273583313776 1.0902646485504959 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3003 0.25742375653524596 No Hit GCTGTCTCTTATACACATCTGACGCCACTGAACTCGTATGCCGTCTTCTGC 1935 0.16587245051471894 Illumina PCR Primer Index 5 (95% over 23bp) GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1552 0.13304084919836887 No Hit GAATCTGTCTCTTATACACATCTGACGCCACTGAACTCGTATGCCGTCTTC 1414 0.12121118606088506 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCACTGAACTCGTATGC 1270 0.1088671897435106 No Hit CCTGTCTCTTATACACATCTGACGCCACTGAACTCGTATGCCGTCTTCTGC 1221 0.10466680210773738 Illumina PCR Primer Index 5 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.2861098324216776E-4 0.0 0.0 0.10183796961833906 0.0 2 4.2861098324216776E-4 0.0 0.0 0.47318652549935325 0.0 3 5.143331798906013E-4 0.0 0.0 0.7223809511563496 0.0 4 5.143331798906013E-4 0.0 0.0 1.0898720081881843 0.0 5 5.143331798906013E-4 0.0 0.0 2.2466073297621465 0.0 6 5.143331798906013E-4 0.0 0.0 2.944643177070341 0.0 7 5.143331798906013E-4 0.0 0.0 3.5444413870194307 0.0 8 5.143331798906013E-4 0.0 0.0 4.485499661825934 0.0 9 5.143331798906013E-4 0.0 0.0 4.805929232897779 0.0 10 5.143331798906013E-4 0.0 0.0 5.662122533022333 0.0 11 5.143331798906013E-4 0.0 0.0 6.878606225660254 0.0 12 5.143331798906013E-4 0.0 0.0 7.89998619872634 0.0 13 5.143331798906013E-4 0.0 0.0 8.283850195318026 0.0 14 5.143331798906013E-4 0.0 0.0 8.434806983615916 0.0 15 6.000553765390349E-4 0.0 0.0 8.759779831110128 0.0 16 6.000553765390349E-4 0.0 0.0 9.414525969110864 0.0 17 6.000553765390349E-4 0.0 0.0 10.231629947563732 0.0 18 6.000553765390349E-4 0.0 0.0 11.008787382378431 0.0 19 6.000553765390349E-4 0.0 0.0 11.555694996995436 0.0 20 6.000553765390349E-4 0.0 0.0 12.070799676655874 0.0 21 6.000553765390349E-4 0.0 0.0 12.720659649447649 0.0 22 6.000553765390349E-4 0.0 0.0 13.418524052362546 0.0 23 6.000553765390349E-4 0.0 0.0 14.103530125780178 0.0 24 6.000553765390349E-4 0.0 0.0 14.646665963744654 0.0 25 6.000553765390349E-4 0.0 0.0 15.156027256229647 0.0 26 6.000553765390349E-4 0.0 0.0 15.624584783109984 0.0 27 6.000553765390349E-4 0.0 0.0 16.09382808756351 0.0 28 6.857775731874685E-4 0.0 0.0 16.58184455308304 0.0 29 6.857775731874685E-4 0.0 0.0 17.073547073058457 0.0 30 6.857775731874685E-4 0.0 0.0 17.680374503132718 0.0 31 7.71499769835902E-4 0.0 0.0 18.192564628107107 0.0 32 7.71499769835902E-4 0.0 0.0 18.701154420822263 0.0 33 8.572219664843355E-4 0.0 0.0 19.212144435043577 0.0 34 0.0010286663597812026 0.0 0.0 19.711476230520702 0.0 35 0.0011143885564296363 0.0 0.0 20.265155898672933 0.0 36 0.0011143885564296363 0.0 0.0 20.754801085928786 0.0 37 0.0011143885564296363 0.0 0.0 21.262105045694216 0.0 38 0.0012001107530780698 0.0 0.0 21.77429517066861 0.0 39 0.0012001107530780698 0.0 0.0 22.300800902483285 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATAGCG 20 7.033331E-4 45.0 1 TTGGCCG 30 2.1655305E-6 44.999996 1 ATAGCGG 165 0.0 42.272728 2 CGAATAT 230 0.0 41.086956 14 CGACAGG 235 0.0 40.212765 2 GCTACGA 245 0.0 39.489796 10 CCAACGG 80 0.0 39.375 2 TACGAAT 240 0.0 39.374996 12 AATTGCG 35 6.2483687E-6 38.57143 1 TATACGG 105 0.0 38.57143 2 TCGACGT 35 6.2483687E-6 38.57143 25 ACGGGAG 855 0.0 38.421055 5 CGCACGG 205 0.0 38.414635 2 ACACGAC 785 0.0 38.407642 26 GACACGA 790 0.0 38.16456 25 ACGCTCG 65 9.094947E-12 38.07692 1 CACGACC 810 0.0 37.777775 27 AGACACG 835 0.0 37.724552 24 CGAGACA 800 0.0 37.687496 22 TATTGCG 60 1.5643309E-10 37.499996 1 >>END_MODULE