##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934554.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 882615 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.188549934002936 33.0 31.0 34.0 30.0 34.0 2 32.3118018615138 34.0 31.0 34.0 30.0 34.0 3 32.371042866935184 34.0 31.0 34.0 30.0 34.0 4 35.90981911705557 37.0 35.0 37.0 35.0 37.0 5 35.93029463582649 37.0 35.0 37.0 35.0 37.0 6 35.94540088260453 37.0 35.0 37.0 35.0 37.0 7 36.14703806302862 37.0 35.0 37.0 35.0 37.0 8 35.9340607173003 37.0 35.0 37.0 35.0 37.0 9 37.687644103034735 39.0 38.0 39.0 35.0 39.0 10 37.297032114795236 39.0 37.0 39.0 34.0 39.0 11 37.176088101833756 39.0 37.0 39.0 34.0 39.0 12 36.9987672994454 39.0 35.0 39.0 34.0 39.0 13 36.92481319714712 39.0 35.0 39.0 33.0 39.0 14 37.93939826538185 40.0 37.0 41.0 33.0 41.0 15 38.15916679412881 40.0 37.0 41.0 33.0 41.0 16 38.30516023407714 40.0 37.0 41.0 34.0 41.0 17 38.3174373877625 40.0 37.0 41.0 34.0 41.0 18 38.280860850993925 40.0 37.0 41.0 34.0 41.0 19 38.25864391609026 40.0 37.0 41.0 34.0 41.0 20 38.144117197192436 40.0 36.0 41.0 34.0 41.0 21 38.131914821298075 40.0 36.0 41.0 34.0 41.0 22 38.11728216719634 40.0 36.0 41.0 34.0 41.0 23 38.155518544325666 40.0 36.0 41.0 34.0 41.0 24 38.0717447584734 40.0 36.0 41.0 34.0 41.0 25 37.98082629459051 40.0 36.0 41.0 34.0 41.0 26 37.82184077995502 40.0 35.0 41.0 34.0 41.0 27 37.79717883788515 40.0 35.0 41.0 34.0 41.0 28 37.81508132084771 40.0 35.0 41.0 34.0 41.0 29 37.7986993196354 40.0 35.0 41.0 34.0 41.0 30 37.69941367413878 40.0 35.0 41.0 33.0 41.0 31 37.704588070676344 40.0 35.0 41.0 33.0 41.0 32 37.65717895118483 40.0 35.0 41.0 33.0 41.0 33 37.61741982631158 40.0 35.0 41.0 33.0 41.0 34 37.54073293565145 40.0 35.0 41.0 33.0 41.0 35 37.51292466137557 40.0 35.0 41.0 33.0 41.0 36 37.44724823394119 40.0 35.0 41.0 33.0 41.0 37 37.41301700061749 40.0 35.0 41.0 33.0 41.0 38 37.34765554630275 40.0 35.0 41.0 33.0 41.0 39 37.28021051081162 39.0 35.0 41.0 33.0 41.0 40 37.16516827835466 39.0 35.0 41.0 33.0 41.0 41 37.07113067418977 39.0 35.0 41.0 32.0 41.0 42 37.086354752638464 39.0 35.0 41.0 33.0 41.0 43 37.04961846331639 39.0 35.0 41.0 33.0 41.0 44 36.974129150309025 39.0 35.0 41.0 32.0 41.0 45 36.85108456121865 39.0 35.0 41.0 32.0 41.0 46 36.82304288959512 39.0 35.0 41.0 32.0 41.0 47 36.7922944885369 39.0 35.0 41.0 32.0 41.0 48 36.72522674099126 39.0 35.0 41.0 32.0 41.0 49 36.698058609926186 39.0 35.0 41.0 32.0 41.0 50 36.5752689451233 38.0 35.0 41.0 32.0 41.0 51 35.66763877794961 37.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 14.0 9 8.0 10 17.0 11 16.0 12 18.0 13 14.0 14 22.0 15 37.0 16 38.0 17 82.0 18 164.0 19 291.0 20 474.0 21 710.0 22 1169.0 23 1641.0 24 2550.0 25 3597.0 26 5083.0 27 6479.0 28 7698.0 29 8997.0 30 11246.0 31 14908.0 32 20339.0 33 30407.0 34 64034.0 35 72659.0 36 60820.0 37 91946.0 38 167778.0 39 309009.0 40 346.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.586501475728376 21.50382669680438 24.29938308322428 10.61028874424296 2 34.072047268627884 23.052859967256392 24.739212453901192 18.13588031021453 3 33.38420489114733 23.437852291202844 25.876288075774827 17.301654741874998 4 29.545045121598886 25.255292511457426 25.4343060111147 19.765356355828985 5 26.024597361250372 29.464035848019805 24.821014825263564 19.690351965466256 6 26.620553695552424 33.994890184281935 24.711680630852637 14.67287548931301 7 83.91461735864448 4.472618299031854 7.314174356882673 4.298589985440991 8 84.72131110393546 3.875982166629844 7.136293854058678 4.266412875376013 9 78.95027843397177 5.643004027803742 9.7701715923704 5.636545945854081 10 45.32667131195368 23.8927505197623 16.713289486355887 14.067288681928133 11 32.006254142519666 24.92525053392476 24.107340119984364 18.961155203571206 12 30.116981923035524 21.227602068852217 29.09943746707228 19.555978541039977 13 26.080680704497432 22.53111492553378 31.56653807152609 19.821666298442697 14 21.33931555661302 23.832475088232126 32.18674053806019 22.641468817094655 15 20.42679990709426 24.849566345462065 33.3886235787971 21.33501016864658 16 25.624422879738052 23.848676942947943 29.688369221008028 20.838530956305977 17 25.268548574406736 24.39614101278587 26.90266990703761 23.432640505769786 18 24.99832882967092 23.684845600856548 29.975357318876295 21.34146825059624 19 24.435002804167162 26.31067906165202 26.383304158664878 22.87101397551594 20 24.498224027463845 28.182389830220423 26.817128646125433 20.5022574961903 21 25.60663482945565 26.36608260679911 28.2145669402854 19.81271562345983 22 22.9213190349133 23.410773666887604 29.345411079576035 24.32249621862307 23 21.861627096752265 24.723010599185375 29.779122267353266 23.636240036709097 24 23.916203554211066 24.4070177823853 29.529862964033015 22.14691569937062 25 23.469689502217843 25.42682823201509 27.038063028613834 24.065419237153233 26 21.061278133727615 26.69895707641497 27.452286670858754 24.787478118998656 27 22.405465576723714 25.22345530044244 29.217495737099412 23.153583385734436 28 19.831749970258834 25.730811282382465 28.194739495703107 26.242699251655594 29 21.316089121530904 25.42331594183194 28.198591684936243 25.062003251700908 30 23.16559315216714 24.976122091738752 28.403097613342172 23.455187142751935 31 23.055012661239612 25.332562895486703 27.587793092118307 24.024631351155374 32 23.784662621867973 25.464670326246434 25.66815655750242 25.082510494383172 33 22.636370331344924 24.169315046764446 27.559808070336445 25.634506551554185 34 19.84840502370796 25.692515989417807 28.417260073758094 26.04181891311614 35 20.10400910929454 26.74450354911258 27.395070330778427 25.756417010814452 36 21.96019782124709 26.011567897667724 26.844887068540647 25.183347212544543 37 19.915818335287753 26.518017482141136 28.21513343870204 25.351030743869067 38 20.51222786832311 24.859650017278202 27.773264673725233 26.854857440673452 39 21.00134260124743 25.369385292568108 27.033191142230756 26.596080963953707 40 22.781280626320648 24.93646720257417 27.86379112070382 24.418461050401362 41 19.18594177529274 24.070517722902967 28.379078080476766 28.36446242132753 42 19.382290126499097 23.855928122680897 30.09375548795341 26.668026262866597 43 19.72955365589753 23.627515961092886 30.334517315024108 26.308413067985477 44 20.89427440050305 23.907932677328166 27.978450400231132 27.21934252193765 45 20.60105482005178 24.391269126402793 26.790616520226827 28.217059533318604 46 21.506319289837585 24.49051964899758 27.706304560878753 26.296856500286083 47 18.542172974626535 24.41857435008469 31.07130515570209 25.96794751958668 48 19.194439251542292 23.851282835664474 30.538570044696723 26.41570786809651 49 21.450462545957183 23.271981554811553 29.931170442378612 25.346385456852648 50 20.521518442355955 23.44374387473587 29.153821315069422 26.880916367838754 51 20.083388566928956 23.731185171337447 27.00237362836571 29.18305263336789 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 255.0 1 650.5 2 1046.0 3 2643.0 4 4240.0 5 2781.0 6 1322.0 7 1242.0 8 1162.0 9 1180.0 10 1198.0 11 1226.0 12 1254.0 13 1264.0 14 1274.0 15 1285.0 16 1296.0 17 1346.0 18 1396.0 19 1406.5 20 1417.0 21 1803.5 22 2190.0 23 2283.5 24 2377.0 25 2950.0 26 4705.5 27 5888.0 28 6929.0 29 7970.0 30 9873.0 31 11776.0 32 12940.5 33 14105.0 34 16765.0 35 19425.0 36 21424.5 37 23424.0 38 26446.0 39 29468.0 40 34361.0 41 39254.0 42 42474.5 43 45695.0 44 49542.5 45 53390.0 46 60769.0 47 68148.0 48 77507.0 49 86866.0 50 88525.5 51 90185.0 52 81119.0 53 72053.0 54 64050.5 55 56048.0 56 53096.5 57 50145.0 58 49300.5 59 48456.0 60 42456.0 61 36456.0 62 32702.5 63 28949.0 64 26062.0 65 23175.0 66 20073.5 67 16972.0 68 14287.5 69 11603.0 70 9654.5 71 7706.0 72 6343.0 73 4980.0 74 4062.5 75 2466.5 76 1788.0 77 1330.0 78 872.0 79 679.0 80 486.0 81 343.5 82 201.0 83 112.0 84 23.0 85 13.5 86 4.0 87 5.5 88 7.0 89 3.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 882615.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.015365352073974 #Duplication Level Percentage of deduplicated Percentage of total 1 70.89553611707287 21.98850954502171 2 11.263140405715731 6.986608293899602 3 4.137482128906978 3.849765595971802 4 2.100112969015528 2.6054308405858166 5 1.365391231404149 2.117405394525893 6 0.9411302248193358 1.7513698659990733 7 0.7136313166078634 1.5493475207892122 8 0.5942175228245656 1.474389885520661 9 0.5163851670708877 1.4414287157185806 >10 7.291343430171435 49.17831294079452 >50 0.13585295402268416 2.6850941935311528 >100 0.04208487653192287 2.5529631214495603 >500 0.0011074967508400498 0.2362094864578364 >1k 0.0025841590852934498 1.5831645997346118 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 3254 0.3686771695473111 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2541 0.28789449533488554 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 2218 0.2512986976201401 No Hit GCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTCTTCTGC 1932 0.218894988188508 No Hit CCTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTCTTCTGC 1488 0.16858992879114904 No Hit GAGCGCCATTATTCCTGTCAGTTTAAGTTATGTTGGTGGTTGTTAAACAGG 1251 0.14173790384255877 No Hit CTGTCTCTTATACACATCTGACGCATCCCACTTCGTATGCCGTCTTCTGCT 1143 0.12950153804320116 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.531987333095404E-4 0.0 0.0 0.13539312157622518 0.0 2 4.531987333095404E-4 0.0 0.0 0.6643893430317862 0.0 3 4.531987333095404E-4 0.0 0.0 0.9987367085308997 0.0 4 4.531987333095404E-4 0.0 0.0 1.4557876310735711 0.0 5 4.531987333095404E-4 0.0 0.0 2.799408575653031 0.0 6 4.531987333095404E-4 0.0 0.0 3.8131008423831454 0.0 7 4.531987333095404E-4 0.0 0.0 4.642001325606295 0.0 8 4.531987333095404E-4 0.0 0.0 5.923647343405675 0.0 9 4.531987333095404E-4 0.0 0.0 6.4969437410422435 0.0 10 4.531987333095404E-4 0.0 0.0 7.589265988001563 0.0 11 4.531987333095404E-4 0.0 0.0 9.182826034001234 0.0 12 4.531987333095404E-4 0.0 0.0 10.32216764954142 0.0 13 4.531987333095404E-4 0.0 0.0 10.831563025781342 0.0 14 4.531987333095404E-4 0.0 0.0 11.103255666400413 0.0 15 4.531987333095404E-4 0.0 0.0 11.519632002628553 0.0 16 4.531987333095404E-4 0.0 0.0 12.221976739575013 0.0 17 4.531987333095404E-4 0.0 0.0 13.064019986064139 0.0 18 4.531987333095404E-4 0.0 0.0 13.930762563518636 0.0 19 4.531987333095404E-4 0.0 0.0 14.519241118721073 0.0 20 4.531987333095404E-4 0.0 0.0 15.095596607807481 0.0 21 4.531987333095404E-4 0.0 0.0 15.834083943735378 0.0 22 4.531987333095404E-4 0.0 0.0 16.630580717526893 0.0 23 4.531987333095404E-4 0.0 0.0 17.39603337808671 0.0 24 4.531987333095404E-4 0.0 0.0 18.01249695507101 0.0 25 4.531987333095404E-4 0.0 0.0 18.580694866957845 0.0 26 4.531987333095404E-4 0.0 0.0 19.100740413430543 0.0 27 4.531987333095404E-4 0.0 0.0 19.661800445267755 0.0 28 4.531987333095404E-4 0.0 0.0 20.193062660389863 0.0 29 4.531987333095404E-4 0.0 0.0 20.784147108308833 0.0 30 4.531987333095404E-4 0.0 0.0 21.637860222180677 0.0 31 4.531987333095404E-4 0.0 0.0 22.27075225324745 0.0 32 4.531987333095404E-4 0.0 0.0 22.860703704333147 0.0 33 4.531987333095404E-4 0.0 0.0 23.421877035853687 0.0 34 4.531987333095404E-4 0.0 0.0 24.0272372438719 0.0 35 4.531987333095404E-4 0.0 0.0 24.674518334721256 0.0 36 5.664984166369255E-4 0.0 0.0 25.229913382392095 0.0 37 5.664984166369255E-4 0.0 0.0 25.812840253111492 0.0 38 5.664984166369255E-4 0.0 0.0 26.487879766376054 0.0 39 5.664984166369255E-4 0.0 0.0 27.472227415124376 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCCCGAT 35 1.2115015E-7 45.000004 14 ACCGGTA 25 3.8900667E-5 45.0 41 TACCCGT 20 7.032396E-4 45.0 36 CGCATAA 20 7.032396E-4 45.0 42 TGAACCG 20 7.032396E-4 45.0 1 AATTGCG 20 7.032396E-4 45.0 1 AACGCAT 20 7.032396E-4 45.0 40 CAATGCG 25 3.8900667E-5 45.0 1 ATAACGG 40 6.8121153E-9 45.0 2 ACCGTAA 20 7.032396E-4 45.0 18 CGGTATT 25 3.8900667E-5 45.0 43 CGGTACA 25 3.8900667E-5 45.0 21 CGATCAT 20 7.032396E-4 45.0 10 GGTTACG 25 3.8900667E-5 45.0 1 CGGACTA 20 7.032396E-4 45.0 11 CGTTTTT 1105 0.0 40.316746 1 CTTACGG 45 1.9274012E-8 40.0 2 CGTATGG 85 0.0 39.705883 2 CTATGCG 40 3.4570076E-7 39.375 1 ATGATCG 40 3.4570076E-7 39.375 27 >>END_MODULE