##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934551.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 692477 Sequences flagged as poor quality 0 Sequence length 51 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.19988100687821 33.0 31.0 34.0 30.0 34.0 2 32.31792391660662 34.0 31.0 34.0 30.0 34.0 3 32.38650669986151 34.0 31.0 34.0 30.0 34.0 4 35.927886413555974 37.0 35.0 37.0 35.0 37.0 5 35.93732355009625 37.0 35.0 37.0 35.0 37.0 6 35.958229659613245 37.0 35.0 37.0 35.0 37.0 7 36.15982047057159 37.0 36.0 37.0 35.0 37.0 8 35.94688632257822 37.0 36.0 37.0 35.0 37.0 9 37.69014999776166 39.0 38.0 39.0 35.0 39.0 10 37.3441760520566 39.0 37.0 39.0 34.0 39.0 11 37.23467638636374 39.0 37.0 39.0 34.0 39.0 12 36.99779198442692 39.0 35.0 39.0 34.0 39.0 13 36.9193012908732 39.0 35.0 39.0 33.0 39.0 14 37.879463144624296 40.0 37.0 41.0 33.0 41.0 15 38.10645263308384 40.0 37.0 41.0 33.0 41.0 16 38.26898221890402 40.0 37.0 41.0 34.0 41.0 17 38.29706112982814 40.0 37.0 41.0 34.0 41.0 18 38.30207068249198 40.0 37.0 41.0 34.0 41.0 19 38.30055871891774 40.0 37.0 41.0 34.0 41.0 20 38.172411502475896 40.0 36.0 41.0 34.0 41.0 21 38.14317154215952 40.0 36.0 41.0 34.0 41.0 22 38.14857099947002 40.0 36.0 41.0 34.0 41.0 23 38.1941147503816 40.0 36.0 41.0 34.0 41.0 24 38.11976859881267 40.0 36.0 41.0 34.0 41.0 25 37.998760969678415 40.0 36.0 41.0 34.0 41.0 26 37.84533060303808 40.0 35.0 41.0 34.0 41.0 27 37.819446710865485 40.0 35.0 41.0 34.0 41.0 28 37.835900686954226 40.0 35.0 41.0 34.0 41.0 29 37.80403681277501 40.0 35.0 41.0 34.0 41.0 30 37.70889430262666 40.0 35.0 41.0 33.0 41.0 31 37.69333277495137 40.0 35.0 41.0 33.0 41.0 32 37.57873113475249 40.0 35.0 41.0 33.0 41.0 33 37.561150767462316 40.0 35.0 41.0 33.0 41.0 34 37.49677173393484 40.0 35.0 41.0 33.0 41.0 35 37.45413349468647 40.0 35.0 41.0 33.0 41.0 36 37.41208877695577 40.0 35.0 41.0 33.0 41.0 37 37.35061236690894 39.0 35.0 41.0 33.0 41.0 38 37.221816753480624 39.0 35.0 41.0 33.0 41.0 39 37.170977519830984 39.0 35.0 41.0 33.0 41.0 40 37.064126317552784 39.0 35.0 41.0 32.0 41.0 41 36.98826242604448 39.0 35.0 41.0 32.0 41.0 42 37.00772733246014 39.0 35.0 41.0 32.0 41.0 43 36.95338473335576 39.0 35.0 41.0 32.0 41.0 44 36.84712849668653 39.0 35.0 41.0 32.0 41.0 45 36.704257325514064 39.0 35.0 41.0 32.0 41.0 46 36.66331589352426 38.0 35.0 41.0 32.0 41.0 47 36.63661753386755 38.0 35.0 41.0 32.0 41.0 48 36.5619146917515 38.0 35.0 41.0 32.0 41.0 49 36.52220940190071 38.0 35.0 41.0 32.0 41.0 50 36.39250256687226 38.0 35.0 40.0 31.0 41.0 51 35.40346177562576 37.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 7.0 9 13.0 10 16.0 11 6.0 12 7.0 13 7.0 14 16.0 15 34.0 16 40.0 17 79.0 18 118.0 19 204.0 20 354.0 21 575.0 22 836.0 23 1263.0 24 2040.0 25 2800.0 26 3874.0 27 4776.0 28 5790.0 29 7002.0 30 8771.0 31 11707.0 32 15977.0 33 24953.0 34 51775.0 35 58724.0 36 49551.0 37 75166.0 38 135014.0 39 230713.0 40 269.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.50042817306568 20.629710445256666 24.08585411501032 9.784007266667341 2 34.09961630494587 22.500241885290055 24.815697849892487 18.584443959871592 3 33.685884152109026 23.622589631135764 25.084732056082732 17.606794160672486 4 29.383214171734224 25.894578448092858 24.6068822502408 20.115325129932113 5 25.897755448917437 29.447043006482527 25.11520238217298 19.539999162427055 6 26.817930415017393 34.09037412072892 23.727141840089995 15.36455362416369 7 84.42533109402912 4.492279165950638 7.153450583918311 3.9289391561019356 8 84.97264169062655 3.668569497615083 7.13814321630899 4.22064559544938 9 79.20147528365563 6.006264467989551 9.281174681613974 5.511085566740845 10 44.48840900130979 26.50297410599919 15.711135532299267 13.297481360391753 11 33.62682081859759 24.350700456477256 23.35644360751332 18.66603511741184 12 30.357253742723582 21.581366601345604 28.29812398101309 19.763255674917723 13 25.926204047210234 23.823462728726007 30.266275991838 19.984057232225762 14 21.671044670075684 24.670855494117493 31.92929151437521 21.728808321431615 15 20.796502988546912 24.61872379876877 33.19633720686752 21.3884360058168 16 26.212278530550474 24.395900513663268 28.94623214922662 20.445588806559638 17 25.515360076941185 23.866929876371344 26.77937317773731 23.83833686895016 18 26.171988383729712 22.887258349374783 29.610658548948198 21.33009471794731 19 25.24632587075094 25.28907097275433 26.389468531084788 23.07513462540994 20 26.007217568236925 27.790959122108028 26.17271042937166 20.02911288028339 21 25.472326156681017 26.34080265481742 28.462317159992317 19.72455402850925 22 23.991699363300153 22.92003922151927 29.397943902829986 23.69031751235059 23 22.86400847970402 25.138019024458576 29.380614807423207 22.6173576884142 24 23.79718026735906 24.037043829614557 29.43635673098168 22.729419172044704 25 23.03542211510274 25.736017225120833 27.430225119390244 23.79833554038618 26 21.810688297228644 26.47770250853097 27.074834254422893 24.636774939817496 27 23.14084077882731 24.515326862841654 28.437767608166048 23.906064750164987 28 19.81379886985416 26.790348271494942 27.845112545254207 25.55074031339669 29 22.55150712586844 26.50109678733012 27.219243382812714 23.728152703988727 30 25.843168798386085 24.638219031101393 27.234117523036865 22.284494647475654 31 26.761899673202144 25.325462073108568 26.141229239382678 21.771409014306613 32 26.709045932211467 25.586409368108974 25.987577926775906 21.71696677290365 33 25.582510321642456 25.094551876813238 25.991476973242435 23.33146082830188 34 22.938956817338337 25.279251152023825 29.243281726324483 22.538510304313355 35 21.89444559169474 28.69799285752451 27.40293179412457 22.004629756656175 36 25.79450292211871 28.468671161641467 23.669089370477288 22.067736545762532 37 24.539732005539534 26.934612990756374 26.407086444748344 22.118568558955747 38 22.825306833295546 27.858687003322853 27.12191163027797 22.194094533103627 39 23.10863754319638 26.003896158283958 26.058193990558532 24.82927230796113 40 26.24794758526276 24.70811304924207 26.67554301442503 22.368396351070142 41 21.75610164669729 25.202569904848826 25.761000004332274 27.28032844412161 42 22.417928682107853 24.35402186643022 27.37015092198008 25.857898529481844 43 22.669778202019707 23.669089370477288 28.71344463426222 24.947687793240785 44 23.405542711165857 24.079788931617944 27.281339308020335 25.233329049195856 45 23.36077588136501 24.20715778285777 26.080144178073784 26.351922157703434 46 23.60006180710695 25.212100907322554 26.859953471378834 24.32788381419166 47 20.974703852979953 25.22293159195179 29.685029250068958 24.117335304999298 48 21.312332395155362 25.51073898483271 29.279961644935497 23.896966975076428 49 24.676776268381477 23.601217080134067 28.743626142095696 22.97838050938876 50 22.729419172044704 24.61655766184292 27.721787149609302 24.932236016503076 51 21.930114646407027 24.188240187038705 25.83291575027041 28.048729416283862 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 219.0 1 486.5 2 754.0 3 1742.0 4 2730.0 5 1783.0 6 836.0 7 836.0 8 836.0 9 826.0 10 816.0 11 799.5 12 783.0 13 841.0 14 899.0 15 913.5 16 928.0 17 1019.0 18 1110.0 19 1122.0 20 1134.0 21 1209.5 22 1285.0 23 1600.0 24 1915.0 25 2218.0 26 3586.0 27 4651.0 28 5487.0 29 6323.0 30 6901.0 31 7479.0 32 9378.0 33 11277.0 34 13880.5 35 16484.0 36 16853.5 37 17223.0 38 18967.0 39 20711.0 40 24003.0 41 27295.0 42 30961.0 43 34627.0 44 37779.0 45 40931.0 46 46717.5 47 52504.0 48 60778.0 49 69052.0 50 69891.0 51 70730.0 52 64640.0 53 58550.0 54 52979.5 55 47409.0 56 44900.5 57 42392.0 58 39756.5 59 37121.0 60 33368.5 61 29616.0 62 27009.5 63 24403.0 64 21334.5 65 18266.0 66 15658.5 67 13051.0 68 11468.5 69 9886.0 70 7931.5 71 5977.0 72 4909.0 73 3841.0 74 3281.5 75 2188.5 76 1655.0 77 1266.0 78 877.0 79 694.0 80 511.0 81 294.5 82 78.0 83 60.0 84 42.0 85 30.0 86 18.0 87 11.0 88 4.0 89 3.5 90 3.0 91 1.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 692477.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.861469793534713 #Duplication Level Percentage of deduplicated Percentage of total 1 70.54913245034581 22.477990525267728 2 11.464844708188451 7.305736067150254 3 4.281197095059023 4.09215695773175 4 2.1380464702822897 2.7248521212029075 5 1.334914576912842 2.1266170234628845 6 1.00953963877791 1.9299250023778995 7 0.7694477124785624 1.716101453418807 8 0.6537319471872507 1.6663088550700176 9 0.5566009314283338 1.5960711387381432 >10 7.075894724149309 47.757887367365214 >50 0.11399941361419322 2.288424861154379 >100 0.04944552878446021 2.8357329992245743 >500 4.5782897022648343E-4 0.07541532719131198 >1k 0.002746973821358901 1.4067803006441255 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 2386 0.3445601803381195 No Hit GCTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGCCGTCTTCTGC 1648 0.2379862435864296 TruSeq Adapter, Index 15 (95% over 22bp) GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 1643 0.23726419794448048 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1610 0.23249869670761628 No Hit CCTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGCCGTCTTCTGC 1234 0.17820086443304253 TruSeq Adapter, Index 15 (95% over 22bp) CTGTCTCTTATACACATCTGACGCAGGTAGACTCGTATGCCGTCTTCTGCT 1123 0.1621714511817721 Illumina Single End Adapter 1 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.3322738516947135E-4 0.0 0.0 0.1706915897567717 0.0 2 4.3322738516947135E-4 0.0 0.0 0.7504942402419141 0.0 3 4.3322738516947135E-4 0.0 0.0 1.0707936870105432 0.0 4 4.3322738516947135E-4 0.0 0.0 1.5148517568092514 0.0 5 4.3322738516947135E-4 0.0 0.0 2.79446104347148 0.0 6 4.3322738516947135E-4 0.0 0.0 3.6372327167544913 0.0 7 5.776365135592951E-4 0.0 0.0 4.3822394101175925 0.0 8 5.776365135592951E-4 0.0 0.0 5.551086895304826 0.0 9 5.776365135592951E-4 0.0 0.0 6.041644704445058 0.0 10 5.776365135592951E-4 0.0 0.0 7.115182164895008 0.0 11 5.776365135592951E-4 0.0 0.0 8.707148396264424 0.0 12 5.776365135592951E-4 0.0 0.0 9.87455179016776 0.0 13 5.776365135592951E-4 0.0 0.0 10.388648287235533 0.0 14 5.776365135592951E-4 0.0 0.0 10.663892085946538 0.0 15 5.776365135592951E-4 0.0 0.0 11.07069260062067 0.0 16 5.776365135592951E-4 0.0 0.0 11.80010310811767 0.0 17 5.776365135592951E-4 0.0 0.0 12.692407112438392 0.0 18 5.776365135592951E-4 0.0 0.0 13.552507881128182 0.0 19 5.776365135592951E-4 0.0 0.0 14.162925266831968 0.0 20 5.776365135592951E-4 0.0 0.0 14.76756628740016 0.0 21 5.776365135592951E-4 0.0 0.0 15.515461163331057 0.0 22 5.776365135592951E-4 0.0 0.0 16.304079413467885 0.0 23 5.776365135592951E-4 0.0 0.0 17.08619925282717 0.0 24 5.776365135592951E-4 0.0 0.0 17.710624323984767 0.0 25 5.776365135592951E-4 0.0 0.0 18.297647430889402 0.0 26 5.776365135592951E-4 0.0 0.0 18.828784205107173 0.0 27 5.776365135592951E-4 0.0 0.0 19.458696823143583 0.0 28 5.776365135592951E-4 0.0 0.0 19.99763169029441 0.0 29 5.776365135592951E-4 0.0 0.0 20.583643933300312 0.0 30 5.776365135592951E-4 0.0 0.0 21.467572208174424 0.0 31 5.776365135592951E-4 0.0 0.0 22.111781329921428 0.0 32 5.776365135592951E-4 0.0 0.0 22.735051128051907 0.0 33 5.776365135592951E-4 0.0 0.0 23.333482556099337 0.0 34 5.776365135592951E-4 0.0 0.0 23.932924848045495 0.0 35 5.776365135592951E-4 0.0 0.0 24.613236251889955 0.0 36 5.776365135592951E-4 0.0 0.0 25.193183311503486 0.0 37 7.220456419491189E-4 0.0 0.0 25.804611561106 0.0 38 7.220456419491189E-4 0.0 0.0 26.48463414669368 0.0 39 7.220456419491189E-4 0.0 0.0 27.602216391302527 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGTCG 25 3.8891932E-5 45.0 1 TAACGGC 20 7.0313417E-4 45.0 3 GCCGATT 20 7.0313417E-4 45.0 9 AGGCCGT 20 7.0313417E-4 45.0 24 ATATACG 20 7.0313417E-4 45.0 1 GCGATAT 25 3.8891932E-5 45.0 9 TAAGGCG 20 7.0313417E-4 45.0 1 GCCGTCC 20 7.0313417E-4 45.0 32 GCGTACG 45 3.8380676E-10 45.0 1 TACGTAG 20 7.0313417E-4 45.0 1 CGTAAGG 90 0.0 42.5 2 TTGCGAG 70 0.0 41.785717 1 GCGTAAG 60 3.6379788E-12 41.249996 1 TATACGG 55 6.002665E-11 40.909092 2 GTTACGG 50 1.0804797E-9 40.5 2 AGGTACG 45 1.9264917E-8 40.0 1 ATGGGCG 165 0.0 39.545456 5 CAATTGG 80 0.0 39.375 2 CGATAGA 40 3.4555705E-7 39.375 10 CGTTTTT 680 0.0 38.713234 1 >>END_MODULE