##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934546.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 573036 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.20924165322946 33.0 31.0 34.0 30.0 34.0 2 32.32454505476096 34.0 31.0 34.0 30.0 34.0 3 32.38564069273135 34.0 31.0 34.0 30.0 34.0 4 35.91891085376835 37.0 35.0 37.0 35.0 37.0 5 35.95069768740533 37.0 35.0 37.0 35.0 37.0 6 35.96075290208643 37.0 35.0 37.0 35.0 37.0 7 36.127060079994976 37.0 35.0 37.0 35.0 37.0 8 35.90042161399982 37.0 35.0 37.0 35.0 37.0 9 37.60527785339839 39.0 38.0 39.0 35.0 39.0 10 37.30775029841057 39.0 37.0 39.0 34.0 39.0 11 37.22601546848715 39.0 37.0 39.0 34.0 39.0 12 37.043588884467994 39.0 37.0 39.0 34.0 39.0 13 36.97164750556684 39.0 37.0 39.0 33.0 39.0 14 38.175622473980695 40.0 37.0 41.0 33.0 41.0 15 38.34113912563958 40.0 37.0 41.0 34.0 41.0 16 38.42088804193803 40.0 37.0 41.0 34.0 41.0 17 38.396678393678584 40.0 37.0 41.0 34.0 41.0 18 38.39626480709764 40.0 37.0 41.0 34.0 41.0 19 38.384211463154145 40.0 37.0 41.0 34.0 41.0 20 38.26316147676586 40.0 37.0 41.0 34.0 41.0 21 38.24470888390956 40.0 37.0 41.0 34.0 41.0 22 38.22216579761132 40.0 37.0 41.0 34.0 41.0 23 38.2511325640972 40.0 37.0 41.0 34.0 41.0 24 38.1538193062914 40.0 36.0 41.0 34.0 41.0 25 38.07787468850125 40.0 36.0 41.0 34.0 41.0 26 37.900456515821 40.0 36.0 41.0 34.0 41.0 27 37.87753648985404 40.0 36.0 41.0 34.0 41.0 28 37.90733566477499 40.0 36.0 41.0 34.0 41.0 29 37.91917087233612 40.0 36.0 41.0 34.0 41.0 30 37.80330380639262 40.0 36.0 41.0 34.0 41.0 31 37.8102300728052 40.0 36.0 41.0 34.0 41.0 32 37.76250357743667 40.0 35.0 41.0 34.0 41.0 33 37.75266998932004 40.0 35.0 41.0 33.0 41.0 34 37.70539023726258 40.0 35.0 41.0 33.0 41.0 35 37.69543623786289 40.0 35.0 41.0 33.0 41.0 36 37.60965279668293 40.0 35.0 41.0 33.0 41.0 37 37.574805073328726 40.0 35.0 41.0 33.0 41.0 38 37.51142860134442 40.0 35.0 41.0 33.0 41.0 39 37.44246783797178 40.0 35.0 41.0 33.0 41.0 40 37.358111881277964 39.0 35.0 41.0 33.0 41.0 41 37.27868057155222 39.0 35.0 41.0 33.0 41.0 42 37.26048450708158 39.0 35.0 41.0 33.0 41.0 43 37.20103274488863 39.0 35.0 41.0 33.0 41.0 44 37.10900362280904 39.0 35.0 41.0 33.0 41.0 45 36.99843639841127 39.0 35.0 41.0 33.0 41.0 46 36.921306863792154 39.0 35.0 41.0 32.0 41.0 47 36.88266531247601 39.0 35.0 41.0 32.0 41.0 48 36.846920612317554 39.0 35.0 41.0 32.0 41.0 49 36.83882338980448 39.0 35.0 41.0 32.0 41.0 50 36.716963681164884 39.0 35.0 41.0 32.0 41.0 51 35.80042789632763 37.0 34.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 1.0 8 8.0 9 10.0 10 15.0 11 8.0 12 8.0 13 11.0 14 12.0 15 15.0 16 37.0 17 51.0 18 94.0 19 194.0 20 267.0 21 486.0 22 681.0 23 1069.0 24 1452.0 25 2084.0 26 2842.0 27 3702.0 28 4354.0 29 5362.0 30 6882.0 31 8889.0 32 12229.0 33 17847.0 34 37559.0 35 52350.0 36 40073.0 37 60112.0 38 107471.0 39 206664.0 40 196.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.06412162586644 20.170635003734493 23.295220544608018 10.47002282579105 2 33.92422116586044 23.524874527952868 24.0754507570205 18.475453549166197 3 34.79048436747429 23.693624833343804 24.239838334764308 17.276052464417592 4 29.743332007064126 26.037980161804843 24.14316029010394 20.075527541027093 5 26.790986953699242 29.96146838942056 22.77064617231727 20.476898484562923 6 27.792145694162322 34.98715612980685 22.69996998443379 14.520728191597037 7 82.98745628546898 5.723549654820989 7.248410222045385 4.0405838376646495 8 83.44240152451154 4.39064910407025 7.383305760894604 4.783643610523597 9 76.3709435358337 7.453458421460432 9.733768908061622 6.441829134644246 10 44.02498272359851 24.32168310542444 16.761076092950532 14.89225807802651 11 32.93370748085635 24.390963220460844 22.473631674100755 20.201697624582053 12 29.942097878667305 22.198954341437535 27.72600674303185 20.132941036863304 13 25.402767016382917 24.54784690665159 29.98624868245625 20.063137394509244 14 21.938935773668668 26.405496338798955 29.131852100042583 22.52371578748979 15 20.778450219532456 25.191436489156004 33.312741258838884 20.717372032472657 16 24.121346651868294 23.76395200301552 30.37488046126247 21.73982088385372 17 23.85469673807579 24.04421362706706 27.290781032954296 24.810308601902847 18 24.549766506816326 23.8299164450401 29.69516749383983 21.925149554303744 19 24.853935878374134 25.54237430109103 26.84613183115895 22.757557989375883 20 25.661215002198816 25.744455845706028 27.719898924325868 20.874430227769285 21 25.367516176994116 26.537948750165786 27.943096070752972 20.15143900208713 22 24.000062823278117 24.18731109389288 27.29357317864846 24.51905290418054 23 23.291381344278545 25.22389518285064 28.198926419980598 23.28579705289022 24 24.062537083185003 23.903559287723635 28.95751750326332 23.076386125828048 25 21.93928479188044 25.916696333214666 28.10556404833204 24.03845482657285 26 21.920786826656617 27.163738403869914 27.592158258817946 23.323316510655527 27 22.393706503605358 27.134246364975322 27.45865879281581 23.01338833860351 28 19.599117681960646 26.685583453744616 29.274077021338975 24.441221842955766 29 21.642619311875695 25.734334317564688 28.618271801422594 24.004774569137016 30 24.528999923215995 26.28473603752644 27.317131907942954 21.86913213131461 31 24.205111022693167 27.661089355642577 24.842418277385715 23.291381344278545 32 24.384855401754862 26.705826510027293 26.27217138190271 22.637146706315136 33 25.013262692047274 25.408525816877127 26.403925756845993 23.174285734229613 34 21.47892977055543 25.658248347398764 27.37088071255558 25.49194116949022 35 22.440998471300233 25.341165302005457 27.405608024626726 24.812228202067583 36 24.44506104328524 26.44877459705847 26.830949538946943 22.275214820709344 37 22.461416036688796 27.027446792173613 28.29700053748805 22.214136633649545 38 22.48096105654793 27.018197809561702 26.31091240340921 24.189928730481157 39 24.012103951584194 24.418884677402467 28.213585184874944 23.35542618613839 40 24.112272178362268 24.065503737985047 27.408923697638542 24.413300386014143 41 20.97302787259439 24.632134804794113 26.981201879114053 27.41363544349744 42 21.940855373833408 24.735269686372234 27.683077502984105 25.640797436810253 43 22.412727996146838 23.948408127936116 29.281580912892036 24.35728296302501 44 21.994080651128375 25.076260479271806 27.955660726376703 24.973998143223113 45 23.432035683621972 24.045086172596484 26.498160674023968 26.024717469757576 46 24.242630480458473 24.746438269148886 26.535680131789274 24.47525111860337 47 20.849126407415937 24.82095365736184 29.483313439295262 24.846606495926956 48 21.394990890624673 23.332740002373324 29.866884454030814 25.40538465297119 49 22.636448669891596 22.880586909024913 30.712904599361995 23.7700598217215 50 22.25741489190906 22.619870304832506 29.657124508756866 25.465590294501567 51 20.760650290732173 23.51213536322325 27.119936618292744 28.607277727751836 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 186.0 1 534.5 2 883.0 3 1179.0 4 1475.0 5 1046.0 6 617.0 7 615.5 8 614.0 9 674.5 10 735.0 11 759.5 12 784.0 13 825.5 14 867.0 15 802.0 16 737.0 17 766.5 18 796.0 19 968.5 20 1141.0 21 1045.0 22 949.0 23 1371.5 24 1794.0 25 1911.0 26 2782.0 27 3536.0 28 4385.5 29 5235.0 30 6068.0 31 6901.0 32 8155.0 33 9409.0 34 11234.0 35 13059.0 36 14376.5 37 15694.0 38 17068.5 39 18443.0 40 20800.0 41 23157.0 42 26584.5 43 30012.0 44 34340.0 45 38668.0 46 42495.5 47 46323.0 48 51185.5 49 56048.0 50 56906.5 51 57765.0 52 51262.5 53 44760.0 54 40343.0 55 35926.0 56 33874.5 57 31823.0 58 30416.5 59 29010.0 60 26656.0 61 24302.0 62 22495.5 63 20689.0 64 18335.0 65 15981.0 66 13982.0 67 11983.0 68 9829.0 69 7675.0 70 6260.5 71 4846.0 72 4323.0 73 3800.0 74 2995.5 75 1689.0 76 1187.0 77 806.5 78 426.0 79 397.0 80 368.0 81 265.0 82 162.0 83 95.0 84 28.0 85 23.0 86 18.0 87 10.5 88 3.0 89 1.5 90 0.0 91 1.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 573036.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.41265157097681 #Duplication Level Percentage of deduplicated Percentage of total 1 69.42322434177476 19.724978841566024 2 12.037650704922473 6.840431504241713 3 4.321054142254237 3.6831781728958712 4 2.1379106576417803 2.4297484242181517 5 1.2622405282743527 1.7931800164312446 6 0.8971868679643462 1.5294874724116168 7 0.6965885308155731 1.3854349050081067 8 0.5213386146198165 1.1850089926150882 9 0.4855539001804962 1.2416286406281565 >10 7.969921230256722 53.62715421085825 >50 0.20072297853880416 3.4649252612651886 >100 0.04350033590624239 2.1131382759285455 >500 0.001242866740178354 0.2357152070826043 >1k 0.0018643001102675307 0.7459900748494405 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGCCGTCTTCTGC 1845 0.3219693003580927 No Hit CCTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGCCGTCTTCTGC 1286 0.22441871016829656 No Hit CTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGCCGTCTTCTGCT 1094 0.19091296183834872 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 743 0.12966026567266278 No Hit TCTGTCTCTTATACACATCTGACGCAGATGCCTTCGTATGCCGTCTTCTGC 592 0.1033093906840059 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.745091058851451E-4 0.0 0.0 0.1977188169678694 0.0 2 1.745091058851451E-4 0.0 0.0 0.9472354267445675 0.0 3 1.745091058851451E-4 0.0 0.0 1.2791517461381134 0.0 4 1.745091058851451E-4 0.0 0.0 1.7496282956044646 0.0 5 3.490182117702902E-4 0.0 0.0 3.1413384150384966 0.0 6 3.490182117702902E-4 0.0 0.0 3.8458316754968274 0.0 7 3.490182117702902E-4 0.0 0.0 4.500240822566122 0.0 8 3.490182117702902E-4 0.0 0.0 5.4986074173350366 0.0 9 3.490182117702902E-4 0.0 0.0 5.844658974305279 0.0 10 3.490182117702902E-4 0.0 0.0 6.7571670889787026 0.0 11 5.235273176554352E-4 0.0 0.0 8.256549326743869 0.0 12 5.235273176554352E-4 0.0 0.0 9.410229025750564 0.0 13 5.235273176554352E-4 0.0 0.0 9.856448809498879 0.0 14 5.235273176554352E-4 0.0 0.0 10.038461806937086 0.0 15 5.235273176554352E-4 0.0 0.0 10.439658241367034 0.0 16 5.235273176554352E-4 0.0 0.0 11.292135223615968 0.0 17 5.235273176554352E-4 0.0 0.0 12.246525523701827 0.0 18 5.235273176554352E-4 0.0 0.0 13.161127747645873 0.0 19 5.235273176554352E-4 0.0 0.0 13.746605797890535 0.0 20 6.980364235405804E-4 0.0 0.0 14.356864141170886 0.0 21 6.980364235405804E-4 0.0 0.0 15.132731625936241 0.0 22 6.980364235405804E-4 0.0 0.0 15.903712855736812 0.0 23 6.980364235405804E-4 0.0 0.0 16.67870779497274 0.0 24 6.980364235405804E-4 0.0 0.0 17.274132864252856 0.0 25 6.980364235405804E-4 0.0 0.0 17.861879532874024 0.0 26 6.980364235405804E-4 0.0 0.0 18.36237164855262 0.0 27 6.980364235405804E-4 0.0 0.0 18.89794009451413 0.0 28 6.980364235405804E-4 0.0 0.0 19.430541885675595 0.0 29 6.980364235405804E-4 0.0 0.0 20.008516044367195 0.0 30 6.980364235405804E-4 0.0 0.0 20.61301558715334 0.0 31 6.980364235405804E-4 0.0 0.0 21.191862291374363 0.0 32 6.980364235405804E-4 0.0 0.0 21.739297356536063 0.0 33 6.980364235405804E-4 0.0 0.0 22.293189258615513 0.0 34 6.980364235405804E-4 0.0 0.0 22.832771414012385 0.0 35 8.725455294257254E-4 0.0 0.0 23.411792627339295 0.0 36 8.725455294257254E-4 0.0 0.0 23.970047257065875 0.0 37 0.0010470546353108705 0.0 0.0 24.511898030839248 0.0 38 0.0010470546353108705 0.0 0.0 25.052527240871427 0.0 39 0.0010470546353108705 0.0 0.0 25.59699565123308 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAACGTC 40 6.8048394E-9 45.000004 20 CCGATTG 20 7.0303207E-4 45.000004 11 ACGTTAG 25 3.8883478E-5 45.000004 1 CGTGCAA 20 7.0303207E-4 45.000004 15 TCTAGCG 35 1.210501E-7 45.000004 1 TATTGCG 20 7.0303207E-4 45.000004 1 TCTACGG 25 3.8883478E-5 45.000004 2 TCGAGAG 45 3.8380676E-10 45.000004 1 CGTCAAT 20 7.0303207E-4 45.000004 17 GCGTAAG 25 3.8883478E-5 45.000004 1 ATTTCGC 20 7.0303207E-4 45.000004 21 CGTTAGG 85 0.0 42.352943 2 GTATGCG 70 0.0 41.785717 1 CGTCGCG 60 3.6379788E-12 41.250004 16 TTAGGCG 45 1.9254003E-8 40.000004 1 TCGATCA 45 1.9254003E-8 40.000004 17 ACGGGCC 40 3.45417E-7 39.375004 5 CGGGGTA 80 0.0 39.375004 6 CGGTAGT 75 0.0 39.0 12 ACAACGA 35 6.2428044E-6 38.57143 13 >>END_MODULE