##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934540.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 618640 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.079155890340104 33.0 31.0 34.0 30.0 34.0 2 32.20673574291995 33.0 31.0 34.0 30.0 34.0 3 32.254196301564726 34.0 31.0 34.0 30.0 34.0 4 35.8310261218156 37.0 35.0 37.0 35.0 37.0 5 35.86030647872753 37.0 35.0 37.0 35.0 37.0 6 35.89121298331825 37.0 35.0 37.0 35.0 37.0 7 36.096618388723655 37.0 35.0 37.0 35.0 37.0 8 35.80293547135653 37.0 35.0 37.0 35.0 37.0 9 37.54000387947757 39.0 37.0 39.0 35.0 39.0 10 37.145709944394156 39.0 37.0 39.0 33.0 39.0 11 37.13252780292254 39.0 37.0 39.0 34.0 39.0 12 37.077308289150395 39.0 37.0 39.0 34.0 39.0 13 37.04791963015647 39.0 37.0 39.0 33.0 39.0 14 38.234013319539635 40.0 37.0 41.0 34.0 41.0 15 38.37171860856071 40.0 38.0 41.0 34.0 41.0 16 38.48018395189448 40.0 38.0 41.0 34.0 41.0 17 38.45535044613992 40.0 38.0 41.0 34.0 41.0 18 38.45878540023277 40.0 37.0 41.0 34.0 41.0 19 38.442231346178716 40.0 37.0 41.0 34.0 41.0 20 38.305027156342945 40.0 37.0 41.0 34.0 41.0 21 38.31430395706712 40.0 37.0 41.0 34.0 41.0 22 38.29896870554765 40.0 37.0 41.0 34.0 41.0 23 38.32570315530842 40.0 37.0 41.0 34.0 41.0 24 38.23950439674124 40.0 37.0 41.0 34.0 41.0 25 38.1579480796586 40.0 37.0 41.0 34.0 41.0 26 38.04023988102936 40.0 37.0 41.0 34.0 41.0 27 37.98688736583473 40.0 36.0 41.0 34.0 41.0 28 38.012988167593434 40.0 37.0 41.0 34.0 41.0 29 38.03307739557739 40.0 37.0 41.0 34.0 41.0 30 37.932141471615154 40.0 36.0 41.0 34.0 41.0 31 37.94952314754946 40.0 36.0 41.0 34.0 41.0 32 37.87632225526962 40.0 36.0 41.0 34.0 41.0 33 37.85949987068408 40.0 36.0 41.0 34.0 41.0 34 37.81729115479116 40.0 36.0 41.0 33.0 41.0 35 37.80086964955386 40.0 36.0 41.0 33.0 41.0 36 37.70597924479503 40.0 36.0 41.0 33.0 41.0 37 37.67097989137463 40.0 36.0 41.0 33.0 41.0 38 37.59351803957067 40.0 36.0 41.0 33.0 41.0 39 37.531467412388466 40.0 36.0 41.0 33.0 41.0 40 37.43845855424803 40.0 35.0 41.0 33.0 41.0 41 37.35353840682788 40.0 35.0 41.0 33.0 41.0 42 37.346655567050306 40.0 35.0 41.0 33.0 41.0 43 37.289969934048884 39.0 35.0 41.0 33.0 41.0 44 37.245553148842625 39.0 35.0 41.0 33.0 41.0 45 37.15180880641407 39.0 35.0 41.0 33.0 41.0 46 37.08834055347213 39.0 35.0 41.0 32.0 41.0 47 37.01549043062201 39.0 35.0 41.0 32.0 41.0 48 36.97901364282943 39.0 35.0 41.0 32.0 41.0 49 36.952743113927326 39.0 35.0 41.0 32.0 41.0 50 36.82701247898616 39.0 35.0 41.0 32.0 41.0 51 35.87836706323549 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 5.0 8 1.0 9 9.0 10 9.0 11 4.0 12 10.0 13 10.0 14 14.0 15 18.0 16 28.0 17 37.0 18 97.0 19 162.0 20 272.0 21 548.0 22 849.0 23 1268.0 24 1816.0 25 2502.0 26 3297.0 27 3880.0 28 4642.0 29 5780.0 30 7340.0 31 9658.0 32 12889.0 33 18803.0 34 36576.0 35 50119.0 36 43660.0 37 65931.0 38 120928.0 39 227237.0 40 241.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.46204577783525 21.353937669727145 24.334023018233545 9.84999353420406 2 33.36528514160093 25.306155437734386 23.02760894866158 18.3009504720031 3 31.593010474589423 25.1952670373723 25.815498512866935 17.396223975171342 4 28.616804603646713 24.498415879994827 26.98144316565369 19.903336350704773 5 25.62378766326135 29.71178714599767 23.88545842493211 20.77896676580887 6 26.58024052760895 35.1243049269365 23.267813267813267 15.027641277641276 7 82.02589551273762 4.420179749127118 9.03643476011897 4.517489978016294 8 80.92800336221389 5.104260959524117 8.39066339066339 5.577072287598604 9 74.50892279839648 6.713597568860727 10.84265485581275 7.93482477693004 10 39.42761541445752 26.333247122720806 18.966604163972587 15.272533298849089 11 29.437475753265225 24.1691452217768 25.39813138497349 20.995247639984484 12 27.554474330790118 20.726432173800593 30.075973102288895 21.643120393120395 13 23.84181430234062 25.21434113539377 31.292835898099057 19.651008664166557 14 20.27851416009311 27.562718220612958 29.26079787921893 22.897969740075002 15 18.634585542480277 26.837417561101773 33.62666494245442 20.901331953963535 16 21.307545583861373 25.36644898487004 31.110015517910256 22.21598991335833 17 20.76377214535109 25.59242855295487 27.841394025604554 25.802405276089484 18 21.44623690676322 24.86842105263158 30.97326393379025 22.71207810681495 19 21.86602870813397 27.864347601189703 27.329787921893185 22.939835768783137 20 23.651881546618387 26.551144445881285 28.88044743307901 20.91652657442131 21 22.53572352256563 28.25423509634036 29.079432303116516 20.1306090779775 22 21.093689383163067 24.675417043838095 27.398487003750162 26.832406569248672 23 20.557351609983186 27.115608431397902 28.271207810681492 24.055832147937412 24 22.085542480279322 24.180460364670893 29.8010151299625 23.932982025087288 25 19.55482994956679 27.824421311263414 27.537016681753524 25.08373205741627 26 19.87100737100737 27.03122979438769 29.31009957325747 23.787663261347472 27 21.50944006207164 26.30770722875986 28.012575973102287 24.17027673606621 28 17.617192551403075 26.23205741626794 31.023373852321225 25.12737618000776 29 19.437960687960686 24.513610500452607 30.539247381352645 25.50918143023406 30 21.61095305832148 25.868356394672183 28.35510151299625 24.165589034010086 31 22.142603129445234 26.36121169015906 27.177033492822964 24.31915168757274 32 22.279193068666753 28.209782749256433 26.636654597180915 22.874369584895902 33 23.626503297555928 26.294129057286952 25.24424544161386 24.835122203543257 34 22.236033880770723 24.887333505754558 28.784753653174704 24.09187896030001 35 23.15126729600414 24.626923574291997 27.36033880770723 24.861470321996638 36 23.34524117418854 26.85600672442778 27.045454545454543 22.753297555929137 37 21.355069184016553 26.906278287857234 29.294581663002717 22.444070865123496 38 22.15375662744084 27.633841975947238 26.466604163972583 23.745797232639337 39 24.739751713435922 26.218964179490495 26.52883744989008 22.5124466571835 40 26.497963274279062 23.00514030777189 28.579302987197725 21.917593430751324 41 21.965763610500453 24.731507823613086 27.56449631449631 25.738232251390148 42 21.866836932626406 24.646805896805894 29.18757274020432 24.298784430363376 43 21.40534074744601 24.85548946075262 29.276962369067633 24.46220742273374 44 21.052793223845857 24.8495085995086 27.915750678908573 26.181947497736974 45 22.844950213371266 23.151105651105652 26.627764127764124 27.376180007758954 46 24.973975171343593 24.578430104745895 26.72798396482607 23.719610759084446 47 21.165298073192808 24.076684339842235 31.20861890598733 23.549398680977628 48 21.604325617483514 23.441743178585284 29.658444329496962 25.295486874434243 49 22.631255657571447 22.692357429199532 30.74987068408121 23.926516229147808 50 21.397096857623175 22.921569895254105 29.64195654985129 26.039376697271432 51 21.45076296392086 22.631255657571447 26.348441743178586 29.56953963532911 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 198.0 1 452.5 2 707.0 3 1339.5 4 1972.0 5 1342.0 6 712.0 7 727.5 8 743.0 9 746.0 10 749.0 11 775.0 12 801.0 13 818.0 14 835.0 15 888.0 16 941.0 17 974.5 18 1008.0 19 1116.0 20 1224.0 21 1321.0 22 1418.0 23 1657.5 24 1897.0 25 2076.0 26 2855.5 27 3456.0 28 4272.5 29 5089.0 30 6205.0 31 7321.0 32 8528.0 33 9735.0 34 11869.5 35 14004.0 36 14837.0 37 15670.0 38 17873.5 39 20077.0 40 22887.5 41 25698.0 42 30069.0 43 34440.0 44 38968.0 45 43496.0 46 54857.0 47 66218.0 48 71014.5 49 75811.0 50 74405.0 51 72999.0 52 62534.0 53 52069.0 54 44207.0 55 36345.0 56 31811.0 57 27277.0 58 25215.0 59 23153.0 60 21655.0 61 20157.0 62 18158.0 63 16159.0 64 13823.0 65 11487.0 66 9522.5 67 7558.0 68 6312.0 69 5066.0 70 4500.5 71 3935.0 72 3135.0 73 2335.0 74 1977.5 75 1388.5 76 1157.0 77 855.0 78 553.0 79 384.0 80 215.0 81 141.5 82 68.0 83 37.5 84 7.0 85 4.5 86 2.0 87 1.5 88 1.0 89 1.5 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 618640.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.63243136458089 #Duplication Level Percentage of deduplicated Percentage of total 1 71.97103985596924 25.645031379053396 2 12.037272896265376 8.578346005858116 3 4.431583971356914 4.73724335087256 4 2.1342109881459654 3.0418850621058184 5 1.279263221193901 2.2791629463212164 6 0.903022560212489 1.9306133638463772 7 0.6618327853811885 1.6507897909947211 8 0.5259662565577866 1.4993165229504695 9 0.4475955621776797 1.435402633354845 >10 5.4520848130916475 40.888261326640745 >50 0.10072715461422968 2.3849924497713646 >100 0.04990572660050005 3.3618947540510815 >500 0.002289253513784406 0.5217323930438859 >1k 0.003204954919298168 2.045328021135459 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCTCTAGGGATCGTATGCCGTCTTCTGC 2378 0.3843915686020949 No Hit CCTGTCTCTTATACACATCTGACGCTCTAGGGATCGTATGCCGTCTTCTGC 2301 0.37194491141859565 No Hit GAATCTGTCTCTTATACACATCTGACGCTCTAGGGATCGTATGCCGTCTTC 1900 0.3071253071253071 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTCTAGGGATCGTATGC 1781 0.28788956420535367 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCTAGGGATCGTATGCCG 1565 0.2529742661321609 No Hit CTGTCTCTTATACACATCTGACGCTCTAGGGATCGTATGCCGTCTTCTGCT 1478 0.23891115996379156 Illumina Single End Adapter 2 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1134 0.18330531488426224 No Hit TCTGTCTCTTATACACATCTGACGCTCTAGGGATCGTATGCCGTCTTCTGC 746 0.1205870942713048 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 678 0.10959524117418855 No Hit CGCTGTCTCTTATACACATCTGACGCTCTAGGGATCGTATGCCGTCTTCTG 673 0.10878701668175352 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2457002457002457 0.0 2 0.0 0.0 0.0 1.246443812233286 0.0 3 0.0 0.0 0.0 1.762575973102289 0.0 4 0.0 0.0 0.0 2.5379865511444457 0.0 5 0.0 0.0 0.0 4.971065563170827 0.0 6 0.0 0.0 0.0 6.202314754946334 0.0 7 0.0 0.0 0.0 7.343689383163067 0.0 8 0.0 0.0 0.0 9.153304021725074 0.0 9 0.0 0.0 0.0 9.725203672572095 0.0 10 0.0 0.0 0.0 11.497963274279064 0.0 11 0.0 0.0 0.0 13.842460881934565 0.0 12 0.0 0.0 0.0 15.757629639208586 0.0 13 0.0 0.0 0.0 16.46304797620587 0.0 14 0.0 0.0 0.0 16.72426613216087 0.0 15 0.0 0.0 0.0 17.309259019785337 0.0 16 0.0 0.0 0.0 18.474557092978145 0.0 17 0.0 0.0 0.0 19.927744730376308 0.0 18 0.0 0.0 0.0 21.37414328203802 0.0 19 0.0 0.0 0.0 22.329141342299238 0.0 20 1.6164489848700375E-4 0.0 0.0 23.189253847148585 0.0 21 1.6164489848700375E-4 0.0 0.0 24.300562524246736 0.0 22 1.6164489848700375E-4 0.0 0.0 25.46602224233803 0.0 23 1.6164489848700375E-4 0.0 0.0 26.74431009957326 0.0 24 1.6164489848700375E-4 0.0 0.0 27.6555023923445 0.0 25 1.6164489848700375E-4 0.0 0.0 28.533395836027417 0.0 26 1.6164489848700375E-4 0.0 0.0 29.281326781326783 0.0 27 1.6164489848700375E-4 0.0 0.0 30.03572352256563 0.0 28 3.232897969740075E-4 0.0 0.0 30.793838096469674 0.0 29 3.232897969740075E-4 0.0 0.0 31.555670503038925 0.0 30 3.232897969740075E-4 0.0 0.0 32.40349799560326 0.0 31 3.232897969740075E-4 0.0 0.0 33.212369067632224 0.0 32 3.232897969740075E-4 0.0 0.0 33.93249709039183 0.0 33 3.232897969740075E-4 0.0 0.0 34.69416785206259 0.0 34 3.232897969740075E-4 0.0 0.0 35.399586189059875 0.0 35 3.232897969740075E-4 0.0 0.0 36.184857105909735 0.0 36 3.232897969740075E-4 0.0 0.0 36.898842622526836 0.0 37 3.232897969740075E-4 0.0 0.0 37.63966119229277 0.0 38 3.232897969740075E-4 0.0 0.0 38.33004655373077 0.0 39 3.232897969740075E-4 0.0 0.0 39.027059356006724 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CACGCTT 20 7.0307567E-4 45.000004 23 CGCGACA 20 7.0307567E-4 45.000004 38 TACGAAT 95 0.0 45.000004 12 ATAACGG 20 7.0307567E-4 45.000004 2 TCGAGAG 20 7.0307567E-4 45.000004 1 TCGCGAC 20 7.0307567E-4 45.000004 37 TCGTTAG 25 3.8887094E-5 45.0 1 GAATGCG 25 3.8887094E-5 45.0 1 TCGATTG 35 1.2107193E-7 45.0 1 CCTCGAT 25 3.8887094E-5 45.0 15 ACGATTG 35 1.2107193E-7 45.0 1 TGTTACG 35 1.2107193E-7 45.0 1 AGTTACG 25 3.8887094E-5 45.0 1 ATCGGGC 25 3.8887094E-5 45.0 4 GCTAACG 25 3.8887094E-5 45.0 1 AGGGCGT 35 1.2107193E-7 45.0 6 CGATCGA 25 3.8887094E-5 45.0 41 GGACGAT 30 2.1638698E-6 44.999996 8 AACACGT 180 0.0 42.5 41 TAACGGG 140 0.0 41.785713 3 >>END_MODULE