SRR2934537.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934537.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	479348
Sequences flagged as poor quality	0
Sequence length	51
%GC	51

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG	5679	1.1847342640419902	No Hit
GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC	3340	0.6967797925515492	No Hit
GCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGCCGTCTTCTGC	1635	0.3410883116232883	No Hit
CCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGCCGTCTTCTGC	1541	0.3214783414137537	No Hit
CTGTCTCTTATACACATCTGACGCGACAACCATCGTATGCCGTCTTCTGCT	1007	0.21007702128724853	No Hit
GGGGTTGGGGATTTAGCCTGTCTCTTATACACATCTGACGCGACAACCATC	967	0.2017323531129785	No Hit
GGGGCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGCCGTCTTC	959	0.20006341947812445	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	667	0.1391473418059531	No Hit
GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCACTGTCTCTT	542	0.11307025376135918	No Hit
GGGGTTGGGGCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGCC	526	0.10973238649165115	No Hit
TCTGTCTCTTATACACATCTGACGCGACAACCATCGTATGCCGTCTTCTGC	494	0.10305665195223512	No Hit
TGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAG	489	0.10201356843045135	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTACGAA	35	1.2099372E-7	45.000004	11
TCGACGG	35	1.2099372E-7	45.000004	2
ACTATAG	25	3.8873914E-5	45.0	1
ACAGTCG	20	7.0291676E-4	45.0	22
TAGACGT	20	7.0291676E-4	45.0	45
TTGTACG	20	7.0291676E-4	45.0	28
CGCGAGT	20	7.0291676E-4	45.0	12
TCGATCA	45	3.8380676E-10	45.0	17
GTTACCG	20	7.0291676E-4	45.0	38
CTAACTG	20	7.0291676E-4	45.0	1
CCCAATG	20	7.0291676E-4	45.0	23
TATCTAG	20	7.0291676E-4	45.0	40
TTAACGG	25	3.8873914E-5	45.0	2
CTACCGA	20	7.0291676E-4	45.0	29
TAGATCC	20	7.0291676E-4	45.0	41
TACTACG	20	7.0291676E-4	45.0	1
CTCTAAG	20	7.0291676E-4	45.0	15
TACCGGT	20	7.0291676E-4	45.0	40
ATTAAGA	30	2.1628439E-6	44.999996	45
TTAAGCG	30	2.1628439E-6	44.999996	1