SRR2934536.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934536.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	261615
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTGC	1825	0.6975899699940753	No Hit
CCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTGC	1489	0.5691569672992757	No Hit
CTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTGCT	957	0.3658047130325096	No Hit
TCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTGC	589	0.2251399957953481	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	514	0.1964719148366875	No Hit
ACTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTGC	441	0.1685683160369245	No Hit
AATGACTGGGGAAATTATAAAAGAGGATTCTGACCGTAGGTATTTTGTACA	386	0.14754505666724002	No Hit
GCCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTG	374	0.1429581637138543	No Hit
GGCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTG	304	0.11620128815243774	No Hit
CGCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTG	283	0.10817422548401276	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCC	283	0.10817422548401276	No Hit
GGCCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCT	266	0.10167612713338303	No Hit
ACCTGTCTCTTATACACATCTGACGCCGGAACAATCGTATGCCGTCTTCTG	263	0.1005294038950366	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTAATCG	45	3.8198777E-10	45.000004	20
ATCCTAA	35	1.2071177E-7	45.0	25
TCTGATC	20	7.0232875E-4	45.0	28
TTGGCCG	20	7.0232875E-4	45.0	1
GTACCAT	20	7.0232875E-4	45.0	33
GCGACTC	20	7.0232875E-4	45.0	22
CATATGT	20	7.0232875E-4	45.0	45
ATTAGCG	20	7.0232875E-4	45.0	1
TTAGCGG	35	1.2071177E-7	45.0	2
GACCGTA	35	1.2071177E-7	45.0	32
ATGTGAC	35	1.2071177E-7	45.0	29
ATAGCGA	20	7.0232875E-4	45.0	19
ATAGAAT	20	7.0232875E-4	45.0	10
CGACAAT	20	7.0232875E-4	45.0	20
CCTAACA	35	1.2071177E-7	45.0	27
CTGACCG	35	1.2071177E-7	45.0	30
TTAAGCA	20	7.0232875E-4	45.0	23
TAACACT	35	1.2071177E-7	45.0	29
TATTCGC	20	7.0232875E-4	45.0	12
ACGTGGT	20	7.0232875E-4	45.0	10