##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934534.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 621897 Sequences flagged as poor quality 0 Sequence length 51 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.240943435970905 33.0 31.0 34.0 30.0 34.0 2 32.36491734161766 34.0 31.0 34.0 30.0 34.0 3 32.413991384425394 34.0 31.0 34.0 30.0 34.0 4 35.950054430235234 37.0 35.0 37.0 35.0 37.0 5 35.95709257320746 37.0 35.0 37.0 35.0 37.0 6 35.97618094314653 37.0 35.0 37.0 35.0 37.0 7 36.15596634169324 37.0 36.0 37.0 35.0 37.0 8 35.96511962591876 37.0 36.0 37.0 35.0 37.0 9 37.70482411074503 39.0 38.0 39.0 35.0 39.0 10 37.331762333634025 39.0 37.0 39.0 34.0 39.0 11 37.2251466078788 39.0 37.0 39.0 34.0 39.0 12 37.01777143160363 39.0 37.0 39.0 34.0 39.0 13 36.97876658031796 39.0 37.0 39.0 33.0 39.0 14 38.02779881555949 40.0 37.0 41.0 33.0 41.0 15 38.20084997998061 40.0 37.0 41.0 33.0 41.0 16 38.34920895260791 40.0 37.0 41.0 34.0 41.0 17 38.35988917778989 40.0 37.0 41.0 34.0 41.0 18 38.32979416205578 40.0 37.0 41.0 34.0 41.0 19 38.30665689012811 40.0 37.0 41.0 34.0 41.0 20 38.18593271876211 40.0 37.0 41.0 34.0 41.0 21 38.13277118236621 40.0 36.0 41.0 34.0 41.0 22 38.14850690709233 40.0 36.0 41.0 34.0 41.0 23 38.16511898272544 40.0 36.0 41.0 34.0 41.0 24 38.087926135678416 40.0 36.0 41.0 34.0 41.0 25 37.996692378319885 40.0 36.0 41.0 34.0 41.0 26 37.840746940409744 40.0 35.0 41.0 34.0 41.0 27 37.80870465688048 40.0 35.0 41.0 34.0 41.0 28 37.81261527230394 40.0 35.0 41.0 34.0 41.0 29 37.789349361711025 40.0 35.0 41.0 34.0 41.0 30 37.682477966608616 40.0 35.0 41.0 33.0 41.0 31 37.663230406321304 40.0 35.0 41.0 33.0 41.0 32 37.563561168489315 40.0 35.0 41.0 33.0 41.0 33 37.52461098863638 40.0 35.0 41.0 33.0 41.0 34 37.41553665639165 40.0 35.0 41.0 33.0 41.0 35 37.37744031567929 40.0 35.0 41.0 33.0 41.0 36 37.29773419071004 40.0 35.0 41.0 33.0 41.0 37 37.25281356880641 40.0 35.0 41.0 33.0 41.0 38 37.165924582366536 39.0 35.0 41.0 33.0 41.0 39 37.08483880771253 39.0 35.0 41.0 33.0 41.0 40 36.990755703918815 39.0 35.0 41.0 32.0 41.0 41 36.89659702490927 39.0 35.0 41.0 32.0 41.0 42 36.884513030292794 39.0 35.0 41.0 32.0 41.0 43 36.826357097718756 39.0 35.0 41.0 32.0 41.0 44 36.73633415179684 39.0 35.0 41.0 32.0 41.0 45 36.5827122497777 39.0 35.0 41.0 32.0 41.0 46 36.5338794044673 38.0 35.0 41.0 32.0 41.0 47 36.486496960107544 38.0 35.0 41.0 31.0 41.0 48 36.42228375438376 38.0 35.0 41.0 31.0 41.0 49 36.37498170918978 38.0 35.0 41.0 31.0 41.0 50 36.26110272279815 38.0 35.0 40.0 31.0 41.0 51 35.34256798151463 37.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 4.0 9 9.0 10 10.0 11 14.0 12 9.0 13 9.0 14 21.0 15 28.0 16 47.0 17 74.0 18 120.0 19 194.0 20 321.0 21 566.0 22 876.0 23 1230.0 24 1991.0 25 2918.0 26 4020.0 27 5013.0 28 5681.0 29 6652.0 30 7951.0 31 10496.0 32 14006.0 33 21291.0 34 43652.0 35 51992.0 36 45432.0 37 68414.0 38 121522.0 39 207122.0 40 209.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.104575194927776 19.954751349499997 23.592813600966075 11.347859854606149 2 34.46953434411164 22.393740442549166 24.300487058146285 18.836238155192902 3 34.66249234197946 23.226193405017227 25.065726318023724 17.045587934979586 4 29.129260954788332 25.67820716292248 24.951398704287044 20.241133178002148 5 25.539116606126093 30.13810968697389 24.82340323236806 19.499370474531958 6 26.970543353642164 34.00225439260842 24.163326081328577 14.863876172420834 7 83.86018906667825 4.706567164659099 7.575691794621939 3.8575519740407174 8 84.96825036943416 3.594325105282708 7.418109429696558 4.019315095586569 9 79.00102428537201 6.0159479785237755 9.368271594813931 5.614756141290278 10 43.81915333246502 26.11268425478817 16.1718098013015 13.896352611445304 11 33.22013130791755 24.017481994606822 23.463210145731527 19.2991765517441 12 29.652337927341666 22.761164630155797 27.256764383812754 20.329733058689783 13 26.796559558898014 23.70923159301299 29.643494019106058 19.850714828982934 14 22.108966597362585 24.97455366403118 30.7137677139462 22.20271202466003 15 20.788973093615184 24.447456733188936 32.59108823486848 22.172481938327408 16 26.00671815429243 24.716150745219867 28.51726250488425 20.75986859560345 17 25.276372132362756 24.82903117397254 26.655539422122953 23.23905727154175 18 26.745425689463048 22.865844343999086 29.14501919128087 21.243710775256996 19 25.02118518018257 25.884833018972596 26.25949313149927 22.834488669345568 20 26.63913799230419 26.569833911403336 26.753304807709316 20.037723288583155 21 25.30595902536915 26.613249460923594 28.531895153055892 19.548896360651362 22 25.53895580779454 23.11540335457479 28.68352797971368 22.662112857916984 23 23.70971398800766 25.935162896749787 28.653619490044168 21.701503625198384 24 23.90556635584349 23.832563913316836 29.964929883887525 22.29693984695215 25 24.014587624638807 25.77999250679775 27.279115351899108 22.926304516664338 26 22.861502789047062 26.282648091243406 27.23859417234687 23.617254947362667 27 23.248544373103584 25.23279578451094 28.362574509926887 23.15608533245859 28 20.25930338946803 26.57562265133937 28.456159138892772 24.708914820299825 29 22.456451791856207 26.433476926243415 27.19968097611019 23.910390305790187 30 24.65569057255462 24.514348839116444 28.29134084904735 22.538619739281586 31 25.2577195259022 25.236654944468295 27.0628415959556 22.442783933673905 32 25.104317917597285 25.360308861435254 26.947066797234914 22.588306423732547 33 25.204816874820107 24.524318335672948 26.146934299409708 24.123930490097234 34 21.760677411211184 25.05945518309302 30.29569205189927 22.88417535379653 35 22.828539131077978 26.37832309851953 27.910409601589976 22.882728168812523 36 24.815845710784906 26.746872874447053 25.120076154089826 23.317205260678215 37 22.601331088588626 26.547322144985426 27.34214829786926 23.50919846855669 38 22.26397618898306 26.803313088823387 27.192284252858595 23.740426469334956 39 22.940133173178197 25.32396843850348 26.4849323923415 25.250965995976827 40 25.387001384473635 22.638153906515065 28.34633387843968 23.62851083057162 41 20.955720963439283 23.38699173657374 26.91249515595026 28.744792144036712 42 21.97084083055554 23.96457934352473 27.451651961659245 26.612927864260485 43 22.08661562927623 23.708909996349878 28.286516899100654 25.917957475273234 44 22.476551583300772 24.383941392224116 27.697512610609152 25.44199441386596 45 22.76438059678693 23.828865551691038 27.426728220267986 25.98002563125405 46 23.031788222165407 23.912802280763536 27.480434863007865 25.574974634063196 47 20.820811163263368 24.55197564870067 29.605384814527163 25.021828373508797 48 21.499219324100295 24.678041540640976 29.366920888828858 24.455818246429875 49 24.341169036030085 22.987729479318922 28.58528019913265 24.085821285518342 50 21.61129576119518 23.903475977533255 29.31835979269879 25.166868468572773 51 21.454195791264468 23.14997499585944 27.25965875378077 28.136170459095318 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 258.0 1 526.5 2 795.0 3 2459.0 4 4123.0 5 2634.0 6 1145.0 7 1104.0 8 1063.0 9 1085.0 10 1107.0 11 1092.5 12 1078.0 13 1088.5 14 1099.0 15 1150.5 16 1202.0 17 1180.5 18 1159.0 19 1161.5 20 1164.0 21 1254.0 22 1344.0 23 1536.0 24 1728.0 25 1997.5 26 2966.0 27 3665.0 28 4770.5 29 5876.0 30 7176.0 31 8476.0 32 9739.5 33 11003.0 34 12710.0 35 14417.0 36 15716.0 37 17015.0 38 18268.0 39 19521.0 40 21390.0 41 23259.0 42 26282.5 43 29306.0 44 32228.0 45 35150.0 46 40033.0 47 44916.0 48 50527.5 49 56139.0 50 57755.0 51 59371.0 52 54211.0 53 49051.0 54 45052.5 55 41054.0 56 38766.5 57 36479.0 58 34930.5 59 33382.0 60 30161.0 61 26940.0 62 24465.5 63 21991.0 64 20287.0 65 18583.0 66 16738.0 67 14893.0 68 13556.0 69 12219.0 70 10226.5 71 8234.0 72 6378.5 73 4523.0 74 3854.0 75 2609.5 76 2034.0 77 1433.0 78 832.0 79 636.5 80 441.0 81 357.5 82 274.0 83 179.0 84 84.0 85 56.5 86 29.0 87 18.0 88 7.0 89 6.5 90 6.0 91 4.0 92 2.0 93 3.5 94 5.0 95 4.0 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 621897.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.94964841582607 #Duplication Level Percentage of deduplicated Percentage of total 1 71.71055448620703 23.628375580244604 2 9.917961397383579 6.535866820910479 3 3.587380563459515 3.5460878489927703 4 1.988708929280472 2.6210904008482188 5 1.3472244825514597 2.21952865186319 6 1.0436509077381433 2.0632758287297728 7 0.8786659591739212 2.0266214100814697 8 0.7819709552042056 2.0612534436292997 9 0.7199948326817036 2.135121893826628 >10 7.922308133414457 48.27436509752387 >50 0.0626241641700587 1.3917687359376623 >100 0.03550346315131443 2.1284345599692513 >500 0.001972414619517468 0.5191105663436456 >1k 0.0014793109646381011 0.8490991610991838 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2607 0.4192012503678262 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1576 0.25341817053306254 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 1043 0.16771265981344177 No Hit GCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCGTCTTCTGC 944 0.1517936249893471 TruSeq Adapter, Index 22 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCGTCTTCTGC 806 0.12960345523454847 TruSeq Adapter, Index 22 (95% over 22bp) CTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCGTCTTCTGCT 760 0.12220673198294893 TruSeq Adapter, Index 20 (95% over 22bp) CGCTGTCTCTTATACACATCTGACGCAGTAGTCCTCGTATGCCGTCTTCTG 685 0.11014685711621057 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.431933262260471E-4 0.0 0.0 0.12735227859275733 0.0 2 6.431933262260471E-4 0.0 0.0 0.5007260044669777 0.0 3 8.039916577825589E-4 0.0 0.0 0.7882334212900207 0.0 4 8.039916577825589E-4 0.0 0.0 1.1362010107783123 0.0 5 8.039916577825589E-4 0.0 0.0 2.1788173925907346 0.0 6 8.039916577825589E-4 0.0 0.0 3.0255814065673254 0.0 7 8.039916577825589E-4 0.0 0.0 3.6954672558317534 0.0 8 8.039916577825589E-4 0.0 0.0 4.723933384467203 0.0 9 8.039916577825589E-4 0.0 0.0 5.176580687798784 0.0 10 8.039916577825589E-4 0.0 0.0 6.104869455874526 0.0 11 8.039916577825589E-4 0.0 0.0 7.435636447836218 0.0 12 8.039916577825589E-4 0.0 0.0 8.411039127058018 0.0 13 8.039916577825589E-4 0.0 0.0 8.837154705682774 0.0 14 8.039916577825589E-4 0.0 0.0 9.060825184877881 0.0 15 8.039916577825589E-4 0.0 0.0 9.380974663006896 0.0 16 9.647899893390706E-4 0.0 0.0 10.003907399456823 0.0 17 9.647899893390706E-4 0.0 0.0 10.741810942969655 0.0 18 9.647899893390706E-4 0.0 0.0 11.483252049776732 0.0 19 9.647899893390706E-4 0.0 0.0 11.979958095954796 0.0 20 9.647899893390706E-4 0.0 0.0 12.471518595523053 0.0 21 9.647899893390706E-4 0.0 0.0 13.098953685256562 0.0 22 9.647899893390706E-4 0.0 0.0 13.76047802128005 0.0 23 9.647899893390706E-4 0.0 0.0 14.413158449067932 0.0 24 9.647899893390706E-4 0.0 0.0 14.927230715054101 0.0 25 9.647899893390706E-4 0.0 0.0 15.413484869680993 0.0 26 9.647899893390706E-4 0.0 0.0 15.885267174467797 0.0 27 9.647899893390706E-4 0.0 0.0 16.377792464025394 0.0 28 9.647899893390706E-4 0.0 0.0 16.83606770896145 0.0 29 9.647899893390706E-4 0.0 0.0 17.341617663375125 0.0 30 9.647899893390706E-4 0.0 0.0 18.079038811893287 0.0 31 9.647899893390706E-4 0.0 0.0 18.610155701024446 0.0 32 0.0011255883208955823 0.0 0.0 19.227942890864565 0.0 33 0.0011255883208955823 0.0 0.0 19.742497551845403 0.0 34 0.0011255883208955823 0.0 0.0 20.250781077895535 0.0 35 0.0011255883208955823 0.0 0.0 20.831102256482986 0.0 36 0.0012863866524520941 0.0 0.0 21.341958555838026 0.0 37 0.0012863866524520941 0.0 0.0 21.852814855193063 0.0 38 0.0012863866524520941 0.0 0.0 22.43088485713872 0.0 39 0.0012863866524520941 0.0 0.0 23.280221644420216 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCCGC 20 7.0307864E-4 45.0 21 TCGTGAC 20 7.0307864E-4 45.0 18 CGTCGCA 20 7.0307864E-4 45.0 27 GCGATGT 105 0.0 42.85714 9 CGTTTTT 1185 0.0 41.58228 1 CGTAAGG 115 0.0 41.086956 2 ACTACGG 40 3.4548066E-7 39.375 2 ACAACGA 310 0.0 39.193546 13 CGTTAGG 75 0.0 39.000004 2 TTACACG 1040 0.0 38.942307 34 TACACGC 1050 0.0 38.785717 35 CAAGGGA 645 0.0 38.372093 4 ACACGCG 1050 0.0 38.142857 36 ATATGCG 30 1.1393193E-4 37.500004 1 GATATAC 30 1.1393193E-4 37.500004 9 CACAACG 340 0.0 37.058826 12 CACGGGA 305 0.0 36.885246 4 AACGGGA 240 0.0 36.562504 4 TATGCGG 80 0.0 36.5625 2 GTCTTAC 1145 0.0 36.55022 31 >>END_MODULE