##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934532.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 345973 Sequences flagged as poor quality 0 Sequence length 51 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.216019747205706 33.0 31.0 34.0 30.0 34.0 2 32.33977506915279 34.0 31.0 34.0 30.0 34.0 3 32.3949123197475 34.0 31.0 34.0 30.0 34.0 4 35.91915843143829 37.0 35.0 37.0 35.0 37.0 5 35.9420503912155 37.0 35.0 37.0 35.0 37.0 6 35.9667575215407 37.0 35.0 37.0 35.0 37.0 7 36.14284351669061 37.0 36.0 37.0 35.0 37.0 8 35.90700430380405 37.0 35.0 37.0 35.0 37.0 9 37.6242683677628 39.0 38.0 39.0 35.0 39.0 10 37.312434785373426 39.0 37.0 39.0 34.0 39.0 11 37.187927959696275 39.0 37.0 39.0 34.0 39.0 12 36.97419451806933 39.0 35.0 39.0 34.0 39.0 13 36.89158691574198 39.0 35.0 39.0 33.0 39.0 14 38.071895783775034 40.0 37.0 41.0 33.0 41.0 15 38.25551704901827 40.0 37.0 41.0 34.0 41.0 16 38.335786318585555 40.0 37.0 41.0 34.0 41.0 17 38.32903723700982 40.0 37.0 41.0 34.0 41.0 18 38.32988123350666 40.0 37.0 41.0 34.0 41.0 19 38.330774366785846 40.0 37.0 41.0 34.0 41.0 20 38.205686570917386 40.0 36.0 41.0 34.0 41.0 21 38.171614547956054 40.0 36.0 41.0 34.0 41.0 22 38.12906787523882 40.0 36.0 41.0 34.0 41.0 23 38.15337902090626 40.0 36.0 41.0 34.0 41.0 24 38.06297890297798 40.0 36.0 41.0 34.0 41.0 25 37.969549646937764 40.0 36.0 41.0 34.0 41.0 26 37.81312992632373 40.0 35.0 41.0 34.0 41.0 27 37.75145170287855 40.0 35.0 41.0 33.0 41.0 28 37.78010422778656 40.0 36.0 41.0 33.0 41.0 29 37.79898431380484 40.0 36.0 41.0 34.0 41.0 30 37.69436343298465 40.0 36.0 41.0 33.0 41.0 31 37.70755521384617 40.0 35.0 41.0 33.0 41.0 32 37.65980293259879 40.0 35.0 41.0 33.0 41.0 33 37.63645428978562 40.0 35.0 41.0 33.0 41.0 34 37.57430782170863 40.0 35.0 41.0 33.0 41.0 35 37.54956600659589 40.0 35.0 41.0 33.0 41.0 36 37.442664600994874 40.0 35.0 41.0 33.0 41.0 37 37.40805496382666 40.0 35.0 41.0 33.0 41.0 38 37.32684053379888 39.0 35.0 41.0 33.0 41.0 39 37.27384217843589 39.0 35.0 41.0 33.0 41.0 40 37.16790327568914 39.0 35.0 41.0 33.0 41.0 41 37.09444089567683 39.0 35.0 41.0 33.0 41.0 42 37.07075118578617 39.0 35.0 41.0 33.0 41.0 43 37.010359189878976 39.0 35.0 41.0 33.0 41.0 44 36.92873432319863 39.0 35.0 41.0 32.0 41.0 45 36.796559269075914 39.0 35.0 41.0 32.0 41.0 46 36.72932569882621 39.0 35.0 41.0 32.0 41.0 47 36.68794674728953 39.0 35.0 41.0 32.0 41.0 48 36.622245088489564 38.0 35.0 41.0 32.0 41.0 49 36.56923806192969 38.0 35.0 41.0 32.0 41.0 50 36.441485318218476 38.0 35.0 40.0 31.0 41.0 51 35.4480002774783 37.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 8.0 10 13.0 11 5.0 12 5.0 13 9.0 14 8.0 15 13.0 16 23.0 17 30.0 18 79.0 19 132.0 20 190.0 21 342.0 22 494.0 23 676.0 24 1029.0 25 1351.0 26 1785.0 27 2382.0 28 2892.0 29 3634.0 30 4363.0 31 5670.0 32 7674.0 33 11168.0 34 23320.0 35 33568.0 36 24207.0 37 36324.0 38 64902.0 39 119537.0 40 138.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.03262682348045 20.625597951285215 24.266633523425238 11.0751417018091 2 32.46293785931272 23.109317779133054 24.91379385096525 19.513950510588977 3 33.40896543949962 23.838565437187295 24.750775349521493 18.001693773791597 4 28.99792758394441 26.871750107667363 24.01170033499724 20.118621973390987 5 25.807794249840306 30.600364768348975 23.144002566674278 20.44783841513644 6 27.779624421558907 35.012269743592704 22.157509401022622 15.050596433825762 7 84.07592499992774 5.130169117243253 6.473337514777165 4.320568368051842 8 84.3938688857223 4.483008789703242 6.682602399609218 4.440519924965243 9 78.23269445881616 7.244784997673229 8.695187196688758 5.827333346821862 10 44.760429282053806 26.27083616351565 15.38848407245652 13.580250481974026 11 33.85177456044258 24.459134094279033 22.197107866798856 19.491983478479536 12 31.564312822098834 21.97223482757325 26.33471398057074 20.128738369757176 13 25.718191882025476 25.851150234266836 27.613715521153388 20.816942362554304 14 21.448783575596938 26.788506617568427 28.341228939830565 23.42148086700407 15 20.79815476930281 26.0977012657057 31.7371586800126 21.366985284978885 16 22.966243030525504 23.80677104860784 30.735057359967392 22.49192856089926 17 22.96479783104462 24.70163856717143 26.9049896957277 25.42857390605625 18 23.190537989958752 24.818988765019235 28.860344593364225 23.130128651657788 19 25.045596043621902 25.593904726669418 26.119379257918972 23.241119971789708 20 26.61826211872025 25.227113098420972 27.229581499134326 20.925043283724452 21 26.103193023733066 26.511317357134807 26.57028149595489 20.815208123177243 22 24.370687886048913 25.573671933937042 26.315348307526886 23.74029187248716 23 23.48189020530504 26.249158171302383 25.981507227442602 24.287444395949972 24 23.682483893251785 24.25911848612464 28.938963445124333 23.119434175499247 25 22.519965430828417 26.3789370846858 26.76567246577045 24.335425018715334 26 22.693100328638362 26.429230026620576 27.142002410592735 23.73566723414833 27 22.05229887881424 26.89487329936151 27.274671722937917 23.77815609888633 28 20.340026533862467 27.394912319747494 28.628534596630374 23.63652654975966 29 22.710153682512797 24.13454229087241 27.74898619256416 25.406317834050636 30 23.10324794131334 26.780991580267827 26.5451350249875 23.570625453431337 31 25.20167758755741 27.470640772545835 24.37271116532215 22.954970474574605 32 26.394834278975527 25.778312180430262 24.80366965052186 23.023183890072346 33 25.021605732239223 26.555251421353688 24.203911865954858 24.21923098045223 34 22.919418567344852 26.276327921543007 26.814231168328163 23.990022342783973 35 23.838854477083473 25.193584470464458 26.743994473557187 24.223566578894882 36 24.61810603717631 28.101903905796117 24.866102268096064 22.413887788931504 37 23.098334263078332 28.419269711798318 26.484147606894183 21.998248418229167 38 23.14573680605134 27.545213065759466 26.313614068149825 22.995436060039367 39 24.49526408130114 27.872984308024034 26.02255089269972 21.609200717975103 40 24.842400996609562 26.17863243663523 26.804114771961974 22.174851794793234 41 21.075344029736424 24.890092579478747 27.477288690157902 26.557274700626927 42 21.746494668659114 25.206880305688596 26.89227194029592 26.154353085356373 43 23.178109274423147 24.914371930757603 27.090842348969428 24.81667644584982 44 22.287577354302215 25.8728282264801 26.62086347778584 25.218730941431843 45 23.57380489228928 25.442158781176566 25.563266497674675 25.42076982885948 46 23.361360568599284 26.9862099065534 25.723105560260485 23.929323964586832 47 21.50861483410555 25.89826373734366 28.899364979348096 23.69375644920268 48 21.886679018304896 24.31345798660589 29.167015923207877 24.63284707188133 49 23.058157717509747 24.57214869368419 28.43892442473835 23.930769164067716 50 22.260118564165413 24.442658820196954 28.68056177794221 24.616660837695427 51 21.345018252869444 25.110919060157872 26.57172669543577 26.972335991536912 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 114.0 1 313.5 2 513.0 3 721.5 4 930.0 5 667.0 6 404.0 7 415.5 8 427.0 9 404.0 10 381.0 11 425.5 12 470.0 13 453.5 14 437.0 15 416.0 16 395.0 17 406.0 18 417.0 19 438.5 20 460.0 21 504.5 22 549.0 23 672.5 24 796.0 25 1201.0 26 1761.0 27 1916.0 28 2366.5 29 2817.0 30 3579.0 31 4341.0 32 5231.0 33 6121.0 34 7266.5 35 8412.0 36 8889.5 37 9367.0 38 10082.0 39 10797.0 40 12337.0 41 13877.0 42 15876.5 43 17876.0 44 20778.0 45 23680.0 46 25443.0 47 27206.0 48 30121.0 49 33036.0 50 33570.0 51 34104.0 52 30181.0 53 26258.0 54 24377.0 55 22496.0 56 20895.0 57 19294.0 58 18172.5 59 17051.0 60 16443.0 61 15835.0 62 14137.5 63 12440.0 64 11079.5 65 9719.0 66 7890.5 67 6062.0 68 5516.0 69 4970.0 70 4409.0 71 3848.0 72 3360.0 73 2872.0 74 2218.5 75 1361.5 76 1158.0 77 828.0 78 498.0 79 371.0 80 244.0 81 170.5 82 97.0 83 72.0 84 47.0 85 40.0 86 33.0 87 32.0 88 31.0 89 18.0 90 5.0 91 3.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 345973.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.892751183456756 #Duplication Level Percentage of deduplicated Percentage of total 1 69.23043398639682 20.694881374780884 2 10.965221996609978 6.5556130563205794 3 3.6132542137588186 3.2403032752340715 4 1.8743313771305503 2.2411568596763756 5 1.394765776833796 2.0846693163046717 6 1.0283309272455154 1.844378432544214 7 0.9364776440806675 1.9595725242361213 8 0.7967046215408006 1.9052554414743388 9 0.6998620547144031 1.8828722037888408 >10 9.359781357205057 54.16607574071871 >50 0.07487825085415632 1.487734647380164 >100 0.022962663595274605 1.23017898024093 >500 0.002995130034166253 0.707308147300098 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCGCAGGATATCGTATGCCGTCTTCTGC 963 0.27834542001832513 RNA PCR Primer, Index 23 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCGCAGGATATCGTATGCCGTCTTCTGC 875 0.25290990915476064 RNA PCR Primer, Index 1 (95% over 22bp) CTGTCTCTTATACACATCTGACGCGCAGGATATCGTATGCCGTCTTCTGCT 532 0.15376922476609448 Illumina Paired End PCR Primer 2 (95% over 23bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 460 0.13295835224135988 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.671196885306079E-4 0.0 0.0 0.15897194289727812 0.0 2 8.671196885306079E-4 0.0 0.0 0.8838840025088663 0.0 3 8.671196885306079E-4 0.0 0.0 1.1937347712104702 0.0 4 8.671196885306079E-4 0.0 0.0 1.6151549398363456 0.0 5 8.671196885306079E-4 0.0 0.0 2.75772964942351 0.0 6 8.671196885306079E-4 0.0 0.0 3.3496833567937383 0.0 7 8.671196885306079E-4 0.0 0.0 3.951175380737803 0.0 8 8.671196885306079E-4 0.0 0.0 4.941715104935934 0.0 9 8.671196885306079E-4 0.0 0.0 5.272087706266096 0.0 10 8.671196885306079E-4 0.0 0.0 6.093539091200759 0.0 11 8.671196885306079E-4 0.0 0.0 7.397109022958439 0.0 12 8.671196885306079E-4 0.0 0.0 8.363658435773889 0.0 13 8.671196885306079E-4 0.0 0.0 8.743456859350296 0.0 14 8.671196885306079E-4 0.0 0.0 8.907631520378757 0.0 15 0.0011561595847074772 0.0 0.0 9.257947874545124 0.0 16 0.0011561595847074772 0.0 0.0 9.953666904642848 0.0 17 0.0011561595847074772 0.0 0.0 10.781188127397225 0.0 18 0.0011561595847074772 0.0 0.0 11.575469762091261 0.0 19 0.0011561595847074772 0.0 0.0 12.071173184034592 0.0 20 0.0011561595847074772 0.0 0.0 12.593468276426195 0.0 21 0.0011561595847074772 0.0 0.0 13.237738205004437 0.0 22 0.0014451994808843465 0.0 0.0 13.878250614932378 0.0 23 0.0014451994808843465 0.0 0.0 14.553447812401545 0.0 24 0.0014451994808843465 0.0 0.0 15.091929138979053 0.0 25 0.0014451994808843465 0.0 0.0 15.613068071785948 0.0 26 0.0014451994808843465 0.0 0.0 16.086226381827483 0.0 27 0.0014451994808843465 0.0 0.0 16.544932697060176 0.0 28 0.0014451994808843465 0.0 0.0 16.954791269838974 0.0 29 0.0014451994808843465 0.0 0.0 17.413497585071667 0.0 30 0.0014451994808843465 0.0 0.0 17.927121480577963 0.0 31 0.0014451994808843465 0.0 0.0 18.39478803259214 0.0 32 0.0014451994808843465 0.0 0.0 18.876328499622804 0.0 33 0.0014451994808843465 0.0 0.0 19.344573131429332 0.0 34 0.0014451994808843465 0.0 0.0 19.837097114514716 0.0 35 0.0014451994808843465 0.0 0.0 20.375000361299872 0.0 36 0.0014451994808843465 0.0 0.0 20.83312859674021 0.0 37 0.0014451994808843465 0.0 0.0 21.304263627508504 0.0 38 0.0014451994808843465 0.0 0.0 21.75892338419472 0.0 39 0.0017342393770612159 0.0 0.0 22.25202544707246 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCGGTT 25 3.885133E-5 45.000004 19 ACGCGAG 20 7.026444E-4 45.0 1 CCCTCGT 20 7.026444E-4 45.0 14 AGACGGT 20 7.026444E-4 45.0 10 GCCGATA 35 1.2086457E-7 45.0 9 CTAACGG 20 7.026444E-4 45.0 2 TCTACGG 20 7.026444E-4 45.0 2 TACGAGA 20 7.026444E-4 45.0 2 GCGGGTT 20 7.026444E-4 45.0 5 TGTTACG 20 7.026444E-4 45.0 1 ATCGCAT 20 7.026444E-4 45.0 10 TACGTTG 20 7.026444E-4 45.0 1 ACGAATT 20 7.026444E-4 45.0 27 TACAGCG 30 2.1610886E-6 44.999996 1 ATTGGGA 185 0.0 40.135136 4 AATGCGG 45 1.9215804E-8 40.0 2 TACGGGT 40 3.4488767E-7 39.375 4 AGTTGCG 40 3.4488767E-7 39.375 1 CGGTAGT 40 3.4488767E-7 39.375 12 CGTGCGT 35 6.2356357E-6 38.571426 12 >>END_MODULE