##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934531.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 430183 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.06184344802096 33.0 31.0 34.0 30.0 34.0 2 32.192945792837 33.0 31.0 34.0 30.0 34.0 3 32.2406766422662 34.0 31.0 34.0 30.0 34.0 4 35.80670319375707 37.0 35.0 37.0 35.0 37.0 5 35.85861830895224 37.0 35.0 37.0 35.0 37.0 6 35.8845956255826 37.0 35.0 37.0 35.0 37.0 7 36.1008268574072 37.0 35.0 37.0 35.0 37.0 8 35.89530269675929 37.0 35.0 37.0 35.0 37.0 9 37.64831478696276 39.0 38.0 39.0 35.0 39.0 10 37.07335947724573 39.0 37.0 39.0 33.0 39.0 11 37.10577823856359 39.0 37.0 39.0 34.0 39.0 12 37.003626363663834 39.0 37.0 39.0 34.0 39.0 13 36.982921221898586 39.0 37.0 39.0 33.0 39.0 14 38.11828919320382 40.0 37.0 41.0 33.0 41.0 15 38.27917653649726 40.0 37.0 41.0 34.0 41.0 16 38.372153246409084 40.0 37.0 41.0 34.0 41.0 17 38.390894107856425 40.0 37.0 41.0 34.0 41.0 18 38.37958961651204 40.0 37.0 41.0 34.0 41.0 19 38.35063449741157 40.0 37.0 41.0 34.0 41.0 20 38.2552843789736 40.0 37.0 41.0 34.0 41.0 21 38.239670093890275 40.0 37.0 41.0 34.0 41.0 22 38.25086997859051 40.0 37.0 41.0 34.0 41.0 23 38.25149064467912 40.0 37.0 41.0 34.0 41.0 24 38.17538117498832 40.0 37.0 41.0 34.0 41.0 25 38.10295153457947 40.0 36.0 41.0 34.0 41.0 26 37.95943586799106 40.0 36.0 41.0 34.0 41.0 27 37.91381807277368 40.0 36.0 41.0 34.0 41.0 28 37.947257330020015 40.0 36.0 41.0 34.0 41.0 29 37.94885200019527 40.0 36.0 41.0 34.0 41.0 30 37.8450357173575 40.0 36.0 41.0 34.0 41.0 31 37.88467233712164 40.0 36.0 41.0 34.0 41.0 32 37.832936215517584 40.0 36.0 41.0 34.0 41.0 33 37.79339722862131 40.0 36.0 41.0 34.0 41.0 34 37.7617688286148 40.0 36.0 41.0 33.0 41.0 35 37.75622002729071 40.0 36.0 41.0 33.0 41.0 36 37.648040485095876 40.0 36.0 41.0 33.0 41.0 37 37.61950611716409 40.0 35.0 41.0 33.0 41.0 38 37.571975182654825 40.0 35.0 41.0 33.0 41.0 39 37.50836969382797 40.0 35.0 41.0 33.0 41.0 40 37.46347949593545 40.0 35.0 41.0 33.0 41.0 41 37.38752112473064 40.0 35.0 41.0 33.0 41.0 42 37.36576759193181 40.0 35.0 41.0 33.0 41.0 43 37.31219969175909 39.0 35.0 41.0 33.0 41.0 44 37.225139068721916 39.0 35.0 41.0 33.0 41.0 45 37.11463493443488 39.0 35.0 41.0 32.0 41.0 46 37.04840265654384 39.0 35.0 41.0 32.0 41.0 47 37.00819651171711 39.0 35.0 41.0 32.0 41.0 48 36.978223221280246 39.0 35.0 41.0 32.0 41.0 49 36.9734671058596 39.0 35.0 41.0 32.0 41.0 50 36.85854392200529 39.0 35.0 41.0 32.0 41.0 51 35.90593538098902 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 4.0 10 5.0 11 4.0 12 5.0 13 3.0 14 1.0 15 8.0 16 15.0 17 30.0 18 64.0 19 99.0 20 183.0 21 267.0 22 460.0 23 710.0 24 1100.0 25 1588.0 26 2269.0 27 2698.0 28 3370.0 29 4060.0 30 5185.0 31 6876.0 32 9367.0 33 13538.0 34 26812.0 35 39699.0 36 29038.0 37 43861.0 38 83314.0 39 155437.0 40 107.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.867416890021225 21.2851274922533 23.518130656023136 10.329324961702344 2 33.8683769465553 22.907460313401508 24.758765455631675 18.465397284411516 3 32.16886766794597 24.31151393709189 25.771357770995134 17.74826062396701 4 29.319847599742438 26.050541281268668 25.47288014635632 19.156730972632577 5 24.310351641045788 30.19459160403828 24.761554966142317 20.733501788773616 6 25.44684471492365 34.562500145287004 25.580973678643744 14.409681461145604 7 81.63758214527306 4.928135235469556 8.527301171826874 4.906981447430512 8 81.82540918632303 3.655188605779401 8.559148083490049 5.960254124407519 9 75.93954200886598 6.025575162198414 11.117129221749813 6.917753607185779 10 40.00948433573618 21.49806012789906 21.383225278544245 17.10923025782051 11 30.934276807777156 24.940083638823477 23.400738755366902 20.724900798032465 12 27.694957727292802 22.099432102151876 29.41213390580288 20.793476264752442 13 23.11341917277066 27.068480158444196 31.162784210440677 18.655316458344473 14 20.80951595018864 29.08413396159309 29.320777436579316 20.785572651638955 15 19.216705448611403 26.27393458132934 34.95326407598627 19.556095894072985 16 21.034536464713856 25.074909980171228 32.484779733276305 21.405773821838615 17 21.230267118877315 25.169753337533095 27.164253352642948 26.435726190946646 18 21.62753990743474 25.062124723664112 32.121678448474256 21.188656920426887 19 22.06735273127948 28.052479991073564 28.045971133215396 21.834196144431555 20 22.82377499808221 27.84233686593845 28.928851209833955 20.405036926145385 21 21.1647136218772 28.51739840951409 30.260610019456834 20.05727794915187 22 20.626338093323074 25.86759588361232 27.226784879923194 26.279281143141407 23 19.127208653061604 27.5171264322393 28.671983783645565 24.68368113105353 24 21.648693695473785 25.079559164355636 30.31918974018034 22.952557399990237 25 18.933802590990346 27.79677486093128 28.2593686872796 25.010053860798777 26 18.64741284523098 29.77848961953401 28.83191571958911 22.7421818156459 27 20.499880283507252 28.635487687797983 28.732423178042833 22.13220885065193 28 17.18896376658306 27.598487155466394 31.51379761636327 23.69875146158728 29 19.812963320261375 27.15751203557556 29.504420211863327 23.52510443229974 30 21.54687656183531 29.231280641029517 27.26490819023532 21.956934606899857 31 21.417396782299626 28.655014261372486 26.697010342110218 23.23057861421767 32 24.718317553227347 28.42952882842883 25.095831309001053 21.756322309342767 33 24.13693707096747 27.64637375256577 25.27831178823896 22.938377388227803 34 19.863871887080613 26.140502995236908 28.672216242854788 25.32340887482769 35 22.194972837141403 27.518056269076187 26.42247601602109 23.864494877761324 36 22.701036535613913 30.587680126829746 26.2367411078541 20.47454222970224 37 20.77487952801482 28.20915749808802 29.280561993384215 21.735400980512946 38 23.822187301683236 27.741449569136854 26.133064300541864 22.303298828638045 39 23.95840839828631 26.09633574548506 27.14031005409326 22.80494580213537 40 24.370558576233837 24.46354225992194 26.969917453734805 24.195981710109418 41 20.381093627595696 27.20470125504727 25.89432869267265 26.51987642468438 42 21.21771432157942 27.34696629109007 27.720295781097814 23.715023606232695 43 21.993895621165876 26.558232194205722 29.00811980017806 22.43975238445034 44 21.74307213441721 25.34944430626036 27.512942166473337 25.394541392849092 45 22.771936594426094 24.778524488415396 25.87294244542439 26.57659647173412 46 24.345452981638047 25.466836206916593 26.558929571833385 23.62878123961198 47 19.609793971402866 26.506393790549605 29.76268239330703 24.121129844740494 48 20.96224165064635 24.865464232663772 29.45606869634551 24.716225420344365 49 22.745901162993423 22.98975087346548 30.725295978688138 23.539051984852957 50 21.557104767041004 22.567604949521485 29.887280529449097 25.98800975398842 51 20.57821903701448 22.853064858443965 26.615882078092344 29.95283402644921 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 132.0 1 249.0 2 366.0 3 756.5 4 1147.0 5 829.5 6 512.0 7 515.0 8 518.0 9 553.5 10 589.0 11 610.5 12 632.0 13 660.0 14 688.0 15 701.0 16 714.0 17 705.5 18 697.0 19 788.0 20 879.0 21 971.0 22 1063.0 23 1179.0 24 1295.0 25 1467.5 26 2041.0 27 2442.0 28 3084.5 29 3727.0 30 4479.5 31 5232.0 32 6048.0 33 6864.0 34 7862.0 35 8860.0 36 10449.5 37 12039.0 38 13997.0 39 15955.0 40 17648.0 41 19341.0 42 22712.5 43 26084.0 44 29346.5 45 32609.0 46 38648.5 47 44688.0 48 50691.0 49 56694.0 50 55700.5 51 54707.0 52 46549.0 53 38391.0 54 32137.0 55 25883.0 56 22195.0 57 18507.0 58 15877.5 59 13248.0 60 11736.5 61 10225.0 62 9203.0 63 8181.0 64 7034.0 65 5887.0 66 4586.5 67 3286.0 68 2942.5 69 2599.0 70 1947.0 71 1295.0 72 1221.0 73 1147.0 74 938.5 75 515.5 76 301.0 77 267.0 78 233.0 79 134.5 80 36.0 81 43.5 82 51.0 83 48.0 84 45.0 85 24.0 86 3.0 87 9.0 88 15.0 89 10.0 90 5.0 91 3.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 430183.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.145106314441655 #Duplication Level Percentage of deduplicated Percentage of total 1 70.24525814050871 25.390223235740855 2 12.9259297716161 9.344182116161411 3 4.902839200122152 5.316409323930818 4 2.3437611833644194 3.3886198859347414 5 1.3579098292301621 2.454089757147476 6 0.933536201380085 2.024565914835791 7 0.7263387877196011 1.8377514891699358 8 0.5413108135963289 1.5652589525276972 9 0.4939877466899672 1.6069715659926307 >10 5.384947466644086 40.15011252633016 >50 0.09287325610520701 2.144668790668088 >100 0.04676135971730702 2.8991527544604736 >500 0.002597853317628168 0.603070722769956 >1k 0.001948389988221126 1.274922964329946 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTGC 2142 0.49792762614980135 No Hit CCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTGC 1830 0.42540035287307965 No Hit CTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTGCT 1459 0.3391579862523624 Illumina Single End Adapter 1 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTGC 834 0.19387098048969856 No Hit ACTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTGC 608 0.14133519920591933 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 608 0.14133519920591933 No Hit CGCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTG 519 0.12064632958531601 No Hit GCCTGTCTCTTATACACATCTGACGCAATGGCGATCGTATGCCGTCTTCTG 477 0.11088304279806502 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.35659242694388205 0.0 2 0.0 0.0 0.0 1.6797502458256137 0.0 3 0.0 0.0 0.0 2.35062752363529 0.0 4 0.0 0.0 0.0 3.2386217028566913 0.0 5 0.0 0.0 0.0 5.583670205470695 0.0 6 0.0 0.0 0.0 6.819423361685608 0.0 7 0.0 0.0 0.0 7.967539396024483 0.0 8 0.0 0.0 0.0 9.86463900247104 0.0 9 0.0 0.0 0.0 10.444624729475596 0.0 10 0.0 0.0 0.0 12.092528063638033 0.0 11 0.0 0.0 0.0 14.650974120316237 0.0 12 0.0 0.0 0.0 16.35559750152842 0.0 13 0.0 0.0 0.0 17.080172856667975 0.0 14 0.0 0.0 0.0 17.344943895969855 0.0 15 0.0 0.0 0.0 17.877972862711914 0.0 16 0.0 0.0 0.0 19.15742835026024 0.0 17 0.0 0.0 0.0 20.68422043641892 0.0 18 0.0 0.0 0.0 22.254017476283348 0.0 19 0.0 0.0 0.0 23.174788404004808 0.0 20 0.0 0.0 0.0 24.024426813704864 0.0 21 0.0 0.0 0.0 25.202530086033153 0.0 22 0.0 0.0 0.0 26.378541225478457 0.0 23 0.0 0.0 0.0 27.654742284097697 0.0 24 0.0 0.0 0.0 28.618983083943345 0.0 25 0.0 0.0 0.0 29.504420211863323 0.0 26 0.0 0.0 0.0 30.311983504694513 0.0 27 0.0 0.0 0.0 31.067940853078806 0.0 28 0.0 0.0 0.0 31.885499891906466 0.0 29 0.0 0.0 0.0 32.639597566617 0.0 30 0.0 0.0 0.0 33.491560568409255 0.0 31 0.0 0.0 0.0 34.31795305718729 0.0 32 0.0 0.0 0.0 35.0890202541709 0.0 33 0.0 0.0 0.0 35.81592020140266 0.0 34 0.0 0.0 0.0 36.54444736309896 0.0 35 0.0 0.0 0.0 37.35642738090534 0.0 36 0.0 0.0 0.0 38.09309061492434 0.0 37 0.0 0.0 0.0 38.78233217026242 0.0 38 0.0 0.0 0.0 39.492030136011884 0.0 39 0.0 0.0 0.0 40.20335531622589 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCGAG 20 7.028358E-4 45.000004 1 TATCACG 20 7.028358E-4 45.000004 1 AACCGAT 20 7.028358E-4 45.000004 35 ACCGGTT 20 7.028358E-4 45.000004 36 ACGCCCC 20 7.028358E-4 45.000004 29 GGCGTAA 20 7.028358E-4 45.000004 25 TAACGTG 20 7.028358E-4 45.000004 29 CCGTCAG 20 7.028358E-4 45.000004 44 TACGAAT 40 6.7975634E-9 45.000004 12 ATGACGG 20 7.028358E-4 45.000004 2 TCCGTCA 20 7.028358E-4 45.000004 43 CGTAACG 20 7.028358E-4 45.000004 27 CCGGTTA 20 7.028358E-4 45.000004 37 CGACTGG 40 6.7975634E-9 45.000004 2 GCTAACG 20 7.028358E-4 45.000004 1 GTAACGT 20 7.028358E-4 45.000004 28 GCGTAAC 20 7.028358E-4 45.000004 26 GCCCGAT 20 7.028358E-4 45.000004 37 AATTTCG 35 1.2095552E-7 45.0 1 GCGACAC 25 3.886722E-5 45.0 15 >>END_MODULE