##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934529.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 507229 Sequences flagged as poor quality 0 Sequence length 51 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.13327905147379 33.0 31.0 34.0 30.0 34.0 2 32.25687214256283 33.0 31.0 34.0 30.0 34.0 3 32.31415199052105 34.0 31.0 34.0 30.0 34.0 4 35.88069491294859 37.0 35.0 37.0 35.0 37.0 5 35.8993846960643 37.0 35.0 37.0 35.0 37.0 6 35.90916923125452 37.0 35.0 37.0 35.0 37.0 7 36.10029395006989 37.0 35.0 37.0 35.0 37.0 8 35.76458167809806 37.0 35.0 37.0 35.0 37.0 9 37.58157558026059 39.0 37.0 39.0 35.0 39.0 10 37.27122660573429 39.0 37.0 39.0 34.0 39.0 11 37.149356602244744 39.0 37.0 39.0 34.0 39.0 12 36.88077771578518 39.0 35.0 39.0 33.0 39.0 13 36.69712496722388 39.0 35.0 39.0 33.0 39.0 14 37.6219123906559 40.0 36.0 41.0 33.0 41.0 15 37.82261463757001 40.0 36.0 41.0 33.0 41.0 16 38.08853200428209 40.0 36.0 41.0 33.0 41.0 17 38.072558942804925 40.0 36.0 41.0 34.0 41.0 18 38.09347651652409 40.0 36.0 41.0 34.0 41.0 19 38.07988107935469 40.0 36.0 41.0 34.0 41.0 20 37.897030729709854 40.0 36.0 41.0 33.0 41.0 21 37.908502865569595 40.0 35.0 41.0 33.0 41.0 22 37.92773481011535 40.0 35.0 41.0 34.0 41.0 23 37.91565939644618 40.0 35.0 41.0 34.0 41.0 24 37.84388313759663 40.0 35.0 41.0 34.0 41.0 25 37.79296727907907 40.0 35.0 41.0 34.0 41.0 26 37.62698307864889 40.0 35.0 41.0 33.0 41.0 27 37.55626551321001 39.0 35.0 41.0 33.0 41.0 28 37.57542648389583 39.0 35.0 41.0 33.0 41.0 29 37.5888208284621 39.0 35.0 41.0 33.0 41.0 30 37.501008420259886 39.0 35.0 41.0 33.0 41.0 31 37.46666101504449 39.0 35.0 41.0 33.0 41.0 32 37.36293469024839 39.0 35.0 41.0 33.0 41.0 33 37.34104122595514 39.0 35.0 41.0 33.0 41.0 34 37.20968635468398 39.0 35.0 41.0 33.0 41.0 35 37.17220032766265 39.0 35.0 41.0 33.0 41.0 36 37.1221578419215 39.0 35.0 41.0 33.0 41.0 37 37.043611465432775 39.0 35.0 41.0 32.0 41.0 38 36.93574302731113 39.0 35.0 41.0 32.0 41.0 39 36.87740054295003 39.0 35.0 41.0 32.0 41.0 40 36.712559810263215 39.0 35.0 41.0 31.0 41.0 41 36.62910637995856 39.0 35.0 41.0 31.0 41.0 42 36.634888778047 39.0 35.0 41.0 31.0 41.0 43 36.5930201151748 39.0 35.0 41.0 32.0 41.0 44 36.55538031145696 38.0 35.0 41.0 31.0 41.0 45 36.41836133186391 38.0 35.0 41.0 31.0 41.0 46 36.33086436303918 38.0 35.0 40.0 31.0 41.0 47 36.23184399945587 38.0 35.0 40.0 31.0 41.0 48 36.18615852011616 38.0 35.0 40.0 31.0 41.0 49 36.1770896380136 38.0 35.0 40.0 31.0 41.0 50 36.03826476798448 37.0 35.0 40.0 31.0 41.0 51 35.059135025797026 36.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 7.0 10 6.0 11 5.0 12 9.0 13 12.0 14 13.0 15 24.0 16 26.0 17 60.0 18 111.0 19 215.0 20 406.0 21 790.0 22 1184.0 23 1536.0 24 2069.0 25 2496.0 26 3113.0 27 3687.0 28 4326.0 29 5448.0 30 7117.0 31 9383.0 32 12803.0 33 19637.0 34 40111.0 35 47937.0 36 37443.0 37 54741.0 38 96095.0 39 156297.0 40 117.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 48.69713679620054 19.551918364289108 21.925402530218108 9.825542309292253 2 32.82817031360589 25.304349711865843 22.605962987132045 19.261516987396227 3 32.660790293930354 26.81254423544395 23.95091763286405 16.575747837761643 4 28.398021406504753 24.864114630669775 27.320007333965528 19.41785662885994 5 28.046109351003196 28.106437131946322 23.5826421596557 20.264811357394784 6 26.829301952372596 35.184896762606236 23.391209887447285 14.594591397573877 7 80.289573348527 4.70044102367964 10.651402029458094 4.358583598335269 8 79.5891007809096 6.770117639172839 8.249922618777711 5.39085896113984 9 74.30923705072068 5.877029901681489 10.097411622758163 9.716321424839668 10 46.96576891305505 22.49181336240633 16.507731221992433 14.034686502546187 11 36.30983244254568 23.413487793481842 21.766302794201437 18.510376969771052 12 30.874614818947656 21.176431158313108 27.032168902014668 20.916785120724565 13 26.714955178035954 25.32721906673317 30.697771617947712 17.26005413728316 14 22.276328837665037 27.623814884401327 29.285194655668345 20.814661622265287 15 19.692880336100657 23.190708733136315 36.21125763708306 20.905153293679977 16 24.833556440976366 23.576136222495165 29.09238233618346 22.497925000345013 17 23.95722642041366 23.870086292384702 26.846453968523093 25.326233318678547 18 25.854199976736346 21.983955964662904 29.44666018701612 22.715183871584628 19 24.442608762511608 25.11350888849021 25.904670277133206 24.539212071864977 20 26.837385086420536 26.7707485179278 27.388418248956587 19.00344814669508 21 24.62162060923173 27.18988859075487 29.05669825660599 19.131792543407418 22 23.60708871141043 22.02673743023368 29.418270643042888 24.947903215313005 23 22.80764703910857 26.242190411037225 28.349522602217142 22.600639947637063 24 24.189271512472672 24.186117118697865 28.373377705139095 23.251233663690364 25 22.12905807830388 27.1792425117649 26.71988391830909 23.971815491622127 26 21.129706700523826 24.77086286470214 28.693154374059844 25.406276060714195 27 23.462183747380376 25.016314130304064 28.370223311364295 23.15127881095127 28 18.096362786828042 26.755370848275632 29.74376465068046 25.404501714215865 29 21.235378891979757 24.328656287396814 29.676930932576806 24.759033888046623 30 24.21490096189295 24.257879577074654 29.711432114488723 21.815787346543672 31 25.566164395174567 26.017045555360596 25.528311669876917 22.888478379587916 32 25.762722557267033 25.29449223131958 24.99620486998969 23.946580341423697 33 25.805701172448735 23.08779663623334 24.974124113566063 26.13237807775186 34 22.779257495135333 24.43669427418385 29.413933351602527 23.370114879078287 35 21.799226779225954 25.77908597497383 28.709714941377563 23.71197230442266 36 24.840850976580597 26.693465870445106 25.71757529636515 22.748107856609145 37 21.489899039684246 26.46654666827015 28.04315210683932 24.000402185206287 38 22.675951099010504 27.83239917276023 23.781960416301118 25.70968931192814 39 24.785254786299678 23.364397540361452 25.064418635369822 26.78592903796904 40 26.923342316783938 22.595711207363934 27.56644434762208 22.914502128230048 41 21.81953318915125 23.433202754574364 26.25224504119441 28.495019015079976 42 21.8784809228179 23.479532913141796 29.061429847268194 25.580556316772107 43 23.101597108998106 22.27100579817006 27.817810101551764 26.80958699128007 44 23.181639851033754 22.470126905204552 27.993864704108006 26.354368539653688 45 22.885323985813113 22.202397733568073 25.557489812293856 29.354788468324962 46 25.06086994237317 23.18301989831023 27.00515940531791 24.750950753998687 47 19.79756677950196 24.340288114441407 31.87810633855714 23.984038767499495 48 22.00367092575543 24.882449544485823 27.8868124653756 25.227067064383146 49 23.765596998594322 21.450666267110122 30.564301331351324 24.21943540294423 50 22.9953334687094 22.65505324025243 28.109985824942974 26.239627466095193 51 21.660236303523657 22.187414363137755 25.334119303115553 30.818230030223038 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 123.0 1 414.0 2 705.0 3 1017.5 4 1330.0 5 941.5 6 553.0 7 569.5 8 586.0 9 583.5 10 581.0 11 620.0 12 659.0 13 671.0 14 683.0 15 683.0 16 683.0 17 678.5 18 674.0 19 732.5 20 791.0 21 943.0 22 1095.0 23 1164.0 24 1233.0 25 1467.5 26 2268.0 27 2834.0 28 3037.5 29 3241.0 30 3839.5 31 4438.0 32 5621.0 33 6804.0 34 7934.5 35 9065.0 36 9793.5 37 10522.0 38 12223.0 39 13924.0 40 15987.0 41 18050.0 42 20900.0 43 23750.0 44 26694.5 45 29639.0 46 41154.5 47 52670.0 48 52538.5 49 52407.0 50 53965.5 51 55524.0 52 49416.0 53 43308.0 54 39034.0 55 34760.0 56 31884.0 57 29008.0 58 27765.0 59 26522.0 60 22726.0 61 18930.0 62 17458.5 63 15987.0 64 14225.0 65 12463.0 66 10947.5 67 9432.0 68 8470.5 69 7509.0 70 6699.0 71 5889.0 72 4816.0 73 3743.0 74 2916.5 75 1823.0 76 1556.0 77 1210.0 78 864.0 79 746.0 80 628.0 81 410.0 82 192.0 83 124.0 84 56.0 85 36.5 86 17.0 87 10.5 88 4.0 89 3.5 90 3.0 91 2.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 507229.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.95514559879035 #Duplication Level Percentage of deduplicated Percentage of total 1 69.76004680433898 20.896723590024035 2 12.087944522701564 7.241922763352513 3 4.523139631175757 4.06473918646586 4 2.3103541436381927 2.7682797902980267 5 1.3812503970037255 2.068777837531679 6 0.9082045258764015 1.6323239283664783 7 0.7387918574153658 1.5491432359254629 8 0.5946811652455547 1.4251008711831115 9 0.4881892718887729 1.3161402647276077 >10 6.986109074809129 46.581021459552026 >50 0.1546354113564036 3.006689197331953 >100 0.05732174731314961 3.1320760633871005 >500 0.0053322555640139165 1.1622244383869644 >1k 0.003999191673010437 3.154837373467175 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTTACGGACTCGTATGC 3891 0.7671091361101199 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTTACGGACTCGTATGCCG 3235 0.6377789913431605 No Hit GAATCTGTCTCTTATACACATCTGACGCTTACGGACTCGTATGCCGTCTTC 3052 0.6017006125438411 No Hit GCTGTCTCTTATACACATCTGACGCTTACGGACTCGTATGCCGTCTTCTGC 2650 0.5224464689518935 TruSeq Adapter, Index 21 (95% over 23bp) GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1578 0.3111020860400332 No Hit CCTGTCTCTTATACACATCTGACGCTTACGGACTCGTATGCCGTCTTCTGC 1395 0.27502370724071373 TruSeq Adapter, Index 21 (95% over 23bp) CTGTCTCTTATACACATCTGACGCTTACGGACTCGTATGCCGTCTTCTGCT 988 0.19478381559413993 Illumina Single End Adapter 2 (95% over 21bp) GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 930 0.18334913816047585 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTTACGGACT 829 0.16343702745702632 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 742 0.14628501130653018 No Hit GAATGACTGTCTCTTATACACATCTGACGCTTACGGACTCGTATGCCGTCT 728 0.1435249167535768 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTTACGGACTCGTA 549 0.10823513639795831 No Hit TCTGTCTCTTATACACATCTGACGCTTACGGACTCGTATGCCGTCTTCTGC 543 0.10705223873240687 TruSeq Adapter, Index 21 (95% over 23bp) GAATGATCTGTCTCTTATACACATCTGACGCTTACGGACTCGTATGCCGTC 512 0.10094060079372433 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.9429922185048566E-4 0.0 0.0 0.20424699691855158 0.0 2 3.9429922185048566E-4 0.0 0.0 1.255054423150096 0.0 3 3.9429922185048566E-4 0.0 0.0 1.7037669376159486 0.0 4 3.9429922185048566E-4 0.0 0.0 2.3780186069802793 0.0 5 3.9429922185048566E-4 0.0 0.0 4.652927967446656 0.0 6 3.9429922185048566E-4 0.0 0.0 5.507965830029434 0.0 7 3.9429922185048566E-4 0.0 0.0 6.460592750020208 0.0 8 3.9429922185048566E-4 0.0 0.0 7.828219601008618 0.0 9 3.9429922185048566E-4 0.0 0.0 8.28935254096276 0.0 10 3.9429922185048566E-4 0.0 0.0 9.982079100366896 0.0 11 3.9429922185048566E-4 0.0 0.0 11.726064558611593 0.0 12 3.9429922185048566E-4 0.0 0.0 13.770703173517287 0.0 13 3.9429922185048566E-4 0.0 0.0 14.324496430606294 0.0 14 3.9429922185048566E-4 0.0 0.0 14.583945318583913 0.0 15 3.9429922185048566E-4 0.0 0.0 15.11624926808207 0.0 16 3.9429922185048566E-4 0.0 0.0 16.039895195266833 0.0 17 3.9429922185048566E-4 0.0 0.0 16.995282209810558 0.0 18 3.9429922185048566E-4 0.0 0.0 17.98871909926286 0.0 19 3.9429922185048566E-4 0.0 0.0 18.821084756589233 0.0 20 3.9429922185048566E-4 0.0 0.0 19.491787732956908 0.0 21 3.9429922185048566E-4 0.0 0.0 20.28748356265119 0.0 22 3.9429922185048566E-4 0.0 0.0 21.11965207036664 0.0 23 3.9429922185048566E-4 0.0 0.0 21.944131743256005 0.0 24 3.9429922185048566E-4 0.0 0.0 22.608525932074073 0.0 25 3.9429922185048566E-4 0.0 0.0 23.201157662515353 0.0 26 3.9429922185048566E-4 0.0 0.0 23.768948541980052 0.0 27 3.9429922185048566E-4 0.0 0.0 24.38287243040126 0.0 28 3.9429922185048566E-4 0.0 0.0 24.91911937211792 0.0 29 3.9429922185048566E-4 0.0 0.0 25.50051357473646 0.0 30 3.9429922185048566E-4 0.0 0.0 26.33761082272504 0.0 31 3.9429922185048566E-4 0.0 0.0 26.923933765616713 0.0 32 3.9429922185048566E-4 0.0 0.0 27.448548880288786 0.0 33 3.9429922185048566E-4 0.0 0.0 28.018705555084587 0.0 34 3.9429922185048566E-4 0.0 0.0 28.61370308085697 0.0 35 3.9429922185048566E-4 0.0 0.0 29.290320545552404 0.0 36 5.914488327757285E-4 0.0 0.0 29.83011618026572 0.0 37 5.914488327757285E-4 0.0 0.0 30.378192098637893 0.0 38 5.914488327757285E-4 0.0 0.0 31.014985341926426 0.0 39 7.885984437009713E-4 0.0 0.0 31.98752437262065 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATAGCGC 25 3.8877122E-5 45.000004 12 AATGCGA 25 3.8877122E-5 45.000004 25 TTGACGA 25 3.8877122E-5 45.000004 20 GCGATAA 25 3.8877122E-5 45.000004 9 TAATGCG 25 3.8877122E-5 45.000004 24 AGTACGG 55 1.8189894E-12 45.000004 2 TTTACGT 20 7.0295547E-4 45.0 28 TAGACCC 20 7.0295547E-4 45.0 31 AAGACCG 20 7.0295547E-4 45.0 24 TACGGGT 35 1.2101373E-7 45.0 4 ACGGGTC 20 7.0295547E-4 45.0 5 CGTTAGG 35 1.2101373E-7 45.0 2 GTTACGT 20 7.0295547E-4 45.0 44 TTACGTC 20 7.0295547E-4 45.0 45 ATGCGAG 20 7.0295547E-4 45.0 1 ATCGGAC 20 7.0295547E-4 45.0 1 TATCGGG 45 3.8380676E-10 45.0 3 TATCGAG 20 7.0295547E-4 45.0 1 CGCCCTA 20 7.0295547E-4 45.0 45 CGACCCC 75 0.0 42.000004 34 >>END_MODULE