SRR2934526.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934526.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	275294
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGC	2870	1.0425218130435099	No Hit
GAATCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTC	2807	1.0196371878791401	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCG	2671	0.9702354573655801	No Hit
GCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGC	2303	0.8365601865641823	No Hit
CCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGC	1979	0.7188678285759951	No Hit
CTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGCT	1146	0.41628222918043983	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGTAGGAAT	631	0.22920949966217935	No Hit
GAATGACTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCT	617	0.22412402740343051	No Hit
TCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGC	588	0.21358983486745078	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	515	0.18707272951826046	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGTAGGAATCGTA	487	0.1769017850007628	No Hit
ACTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTGC	463	0.1681838325571934	No Hit
GAACTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCT	444	0.16128212020603427	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTC	408	0.14820519154068015	No Hit
CGCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTG	407	0.14784194352219807	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCC	353	0.1282265505241669	No Hit
TGGCAAGGGAACTCACCAAACAAAAACTAAACCCAACCTAATATTCTCCAC	350	0.12713680646872072	No Hit
GCCTGTCTCTTATACACATCTGACGCGGTAGGAATCGTATGCCGTCTTCTG	324	0.11769235798818718	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAATAAT	20	7.023931E-4	45.0	33
TCGCAGG	35	1.207427E-7	45.0	2
GCGACAC	25	3.883052E-5	45.0	44
AATCACG	25	3.883052E-5	45.0	1
CGACGTT	20	7.023931E-4	45.0	27
GACGTTT	20	7.023931E-4	45.0	28
TTTCGAC	20	7.023931E-4	45.0	24
TCGGGCA	25	3.883052E-5	45.0	5
TTCGTAC	20	7.023931E-4	45.0	33
CGCTGAT	20	7.023931E-4	45.0	12
CGCTGAG	20	7.023931E-4	45.0	32
ATCACGG	40	6.7830115E-9	45.0	2
GTAATTG	20	7.023931E-4	45.0	29
CAGGGTA	25	3.883052E-5	45.0	5
CGCTCTT	20	7.023931E-4	45.0	38
TCTACGT	20	7.023931E-4	45.0	11
TACGACC	20	7.023931E-4	45.0	39
GCGGGTA	25	3.883052E-5	45.0	5
AGACCTA	20	7.023931E-4	45.0	32
CCATAGT	85	0.0	45.0	8