##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934523.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 703330 Sequences flagged as poor quality 0 Sequence length 51 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.19703979639714 33.0 31.0 34.0 30.0 34.0 2 32.317350319195825 34.0 31.0 34.0 30.0 34.0 3 32.37805866378514 34.0 31.0 34.0 30.0 34.0 4 35.911806691026975 37.0 35.0 37.0 35.0 37.0 5 35.930224787795204 37.0 35.0 37.0 35.0 37.0 6 35.9479206062588 37.0 35.0 37.0 35.0 37.0 7 36.13102100009953 37.0 35.0 37.0 35.0 37.0 8 35.899357342925796 37.0 35.0 37.0 35.0 37.0 9 37.64885473390869 39.0 38.0 39.0 35.0 39.0 10 37.23067692263945 39.0 37.0 39.0 34.0 39.0 11 37.176817425675004 39.0 37.0 39.0 34.0 39.0 12 36.96394153526794 39.0 35.0 39.0 33.0 39.0 13 36.89698576770506 39.0 35.0 39.0 33.0 39.0 14 37.954010208579184 40.0 37.0 41.0 33.0 41.0 15 38.144131488774825 40.0 37.0 41.0 33.0 41.0 16 38.29161844368931 40.0 37.0 41.0 34.0 41.0 17 38.29248574637794 40.0 37.0 41.0 34.0 41.0 18 38.28793880539718 40.0 37.0 41.0 34.0 41.0 19 38.25603201910909 40.0 37.0 41.0 34.0 41.0 20 38.121767875677136 40.0 36.0 41.0 34.0 41.0 21 38.11881620292039 40.0 36.0 41.0 34.0 41.0 22 38.098050701662096 40.0 36.0 41.0 34.0 41.0 23 38.10289622225698 40.0 36.0 41.0 34.0 41.0 24 38.02337594017033 40.0 36.0 41.0 34.0 41.0 25 37.93921061237257 40.0 36.0 41.0 34.0 41.0 26 37.776754866136805 40.0 35.0 41.0 34.0 41.0 27 37.7581789487154 40.0 35.0 41.0 33.0 41.0 28 37.76812733709638 40.0 35.0 41.0 33.0 41.0 29 37.749985071019296 40.0 35.0 41.0 33.0 41.0 30 37.63315513343665 40.0 35.0 41.0 33.0 41.0 31 37.634220067393684 40.0 35.0 41.0 33.0 41.0 32 37.54630116730411 40.0 35.0 41.0 33.0 41.0 33 37.517764065232534 40.0 35.0 41.0 33.0 41.0 34 37.46300598581036 40.0 35.0 41.0 33.0 41.0 35 37.41555457608804 40.0 35.0 41.0 33.0 41.0 36 37.33107929421467 40.0 35.0 41.0 33.0 41.0 37 37.3084953009256 40.0 35.0 41.0 33.0 41.0 38 37.20150711614747 39.0 35.0 41.0 33.0 41.0 39 37.11582329774075 39.0 35.0 41.0 32.0 41.0 40 37.0018256010692 39.0 35.0 41.0 32.0 41.0 41 36.921253181294695 39.0 35.0 41.0 32.0 41.0 42 36.895619410518535 39.0 35.0 41.0 32.0 41.0 43 36.84560021611477 39.0 35.0 41.0 32.0 41.0 44 36.73877696102825 39.0 35.0 41.0 32.0 41.0 45 36.593963004564 39.0 35.0 41.0 32.0 41.0 46 36.52680534030967 38.0 35.0 41.0 31.0 41.0 47 36.494582912715224 38.0 35.0 41.0 31.0 41.0 48 36.43361153370395 38.0 35.0 41.0 31.0 41.0 49 36.39056914961682 38.0 35.0 41.0 31.0 41.0 50 36.254796468229706 38.0 35.0 40.0 31.0 41.0 51 35.24144853767079 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 10.0 9 14.0 10 22.0 11 8.0 12 14.0 13 17.0 14 28.0 15 30.0 16 38.0 17 94.0 18 153.0 19 275.0 20 409.0 21 797.0 22 1154.0 23 1713.0 24 2475.0 25 3307.0 26 4251.0 27 5230.0 28 6185.0 29 7341.0 30 9266.0 31 12284.0 32 16202.0 33 24441.0 34 50067.0 35 60703.0 36 50322.0 37 76716.0 38 135419.0 39 234152.0 40 193.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.649936729557965 19.770093697126526 23.276555813060725 10.303413760254788 2 33.50162796980081 23.170631140431947 24.83158687955867 18.496154010208578 3 33.2866506476334 24.875236375527845 24.474002246456145 17.36411073038261 4 28.749662320674506 26.12401006639842 25.340594031251335 19.785733581675743 5 26.171782804657838 29.84744003526083 24.354286039270328 19.626491120811 6 26.929748482220294 35.273769069995595 23.34892582429301 14.447556623491106 7 82.97797619893933 5.169834928127622 7.803733666984204 4.0484552059488434 8 83.67651031521477 4.558599803790539 7.3137787382878585 4.4511111427068375 9 77.74316465954814 6.386333584519358 9.326489699003313 6.54401205692918 10 44.46248560419718 24.007507144583624 16.98989094735046 14.54011630386874 11 34.82575746804487 23.97836008701463 22.168398902364466 19.027483542576032 12 30.03881534983578 21.921146545718226 28.041033369826394 19.999004734619596 13 26.4147697382452 24.519784453954756 29.846586950649055 19.21885885715098 14 22.363470916923777 26.12201953563761 30.03767790368675 21.47683164375187 15 20.69910283934995 24.344617747003543 34.08712837501599 20.869151038630516 16 25.808368760041517 23.631723373096555 29.049805923250823 21.510101943611108 17 25.365760027298705 23.74561016876857 26.58296958753359 24.30566021639913 18 26.27685439267485 23.39797818947009 28.52729159853838 21.79787581931668 19 25.718083971961953 25.321257446717755 26.205053104517084 22.755605476803208 20 26.683917933260346 26.89733126697283 26.422589680519813 19.99616111924701 21 25.43073663856227 26.82851577495628 27.49918246058038 20.24156512590107 22 24.32002047403068 23.76139223408642 28.29838056104531 23.620206730837587 23 22.914563576130693 26.007564016891077 28.682837359418766 22.395035047559468 24 23.948217764065234 24.50627728093498 29.10355025379267 22.441954701207116 25 22.953521106735103 26.625623818122364 26.730553225370734 23.6903018497718 26 21.85162014985853 26.38206816146048 27.0834458931085 24.68286579557249 27 23.34778837814397 24.949739098289566 28.24648458049564 23.45598794307082 28 20.275404148834827 26.907994824620022 28.105014715709554 24.711586310835596 29 22.561386546855672 26.92747358992223 26.73723572149631 23.77390414172579 30 24.093953051910198 25.93732671718823 26.496808041744274 23.471912189157294 31 24.55689363456699 27.05543628168854 25.005900501898115 23.38176958184636 32 25.682112237498757 26.589367722121903 24.85547324868838 22.873046791690957 33 24.280067678045867 25.894388125062207 24.301110431802993 25.524433765088933 34 21.61574225470263 26.335148507812832 27.68003639827677 24.36907283920777 35 22.111100052606886 26.70979483315087 27.280792799965877 23.89831231427637 36 22.36460836307281 29.039853269446773 24.530021469296063 24.065516898184352 37 21.824747984587606 28.02766837757525 25.619837060839153 24.527746576997995 38 22.82811766880412 27.598140275546328 25.65538225299646 23.918359802653093 39 23.322906743633855 25.97486244010635 24.994952582713662 25.707278233546134 40 24.26826667424964 24.472580438769853 27.11628965066185 24.142863236318657 41 20.185830264598412 24.80428817198186 26.162683235465572 28.84719832795416 42 21.569675685666756 24.498172977123115 28.12733709638434 25.804814240825785 43 21.902663045796427 24.82462002189584 27.39524831871241 25.877468613595322 44 23.225228555585574 24.51580339243314 26.737377902264942 25.52159014971635 45 22.191290006113775 24.496751169436823 26.01381997071076 27.298138853738646 46 22.965322110531332 25.34357982739255 26.296190977208422 25.3949070848677 47 19.932890677207002 25.644718695349265 29.34739027199181 25.07500035545192 48 21.17483969118337 25.387798046436238 28.087953023474043 25.349409238906347 49 23.185275759600756 23.839165114526608 28.476533064137744 24.49902606173489 50 21.532566505054525 24.38968905065901 28.096910411897685 25.980834032388778 51 20.679908435585006 24.474428788762033 25.959080374788506 28.88658240086446 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 303.0 1 573.0 2 843.0 3 1652.0 4 2461.0 5 1667.0 6 873.0 7 903.0 8 933.0 9 983.5 10 1034.0 11 1045.0 12 1056.0 13 1094.5 14 1133.0 15 1089.0 16 1045.0 17 1155.0 18 1265.0 19 1161.5 20 1058.0 21 1443.5 22 1829.0 23 1971.0 24 2113.0 25 2363.5 26 3314.5 27 4015.0 28 5237.5 29 6460.0 30 7419.0 31 8378.0 32 9196.0 33 10014.0 34 12819.5 35 15625.0 36 16899.0 37 18173.0 38 20439.0 39 22705.0 40 24450.0 41 26195.0 42 30418.0 43 34641.0 44 38876.0 45 43111.0 46 49582.0 47 56053.0 48 61633.5 49 67214.0 50 69040.5 51 70867.0 52 64837.5 53 58808.0 54 52834.5 55 46861.0 56 43675.5 57 40490.0 58 38902.0 59 37314.0 60 34188.5 61 31063.0 62 27594.5 63 24126.0 64 20818.0 65 17510.0 66 15536.5 67 13563.0 68 12259.5 69 10956.0 70 9625.5 71 8295.0 72 6606.0 73 4917.0 74 4052.0 75 2581.0 76 1975.0 77 1522.0 78 1069.0 79 861.0 80 653.0 81 471.5 82 290.0 83 240.0 84 190.0 85 113.5 86 37.0 87 22.5 88 8.0 89 5.5 90 3.0 91 2.5 92 2.0 93 1.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 703330.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.014834072002593 #Duplication Level Percentage of deduplicated Percentage of total 1 70.85769742413585 21.267820309096034 2 11.057843907589875 6.637987001608299 3 4.077577234928829 3.6716341236649184 4 2.133441919365541 2.5613962084804585 5 1.3145633883601011 1.972820098937897 6 0.9464744906486083 1.7044964874120692 7 0.700062851828098 1.470858923631531 8 0.5716353236172017 1.3726031510452654 9 0.5199918365784675 1.404672182432873 >10 7.6289532365694965 51.306728767085495 >50 0.14489474083075948 2.7388599929299517 >100 0.04255984136423305 2.296210154348086 >500 9.56400929533327E-4 0.28203856440142444 >1k 0.003347403253366644 1.3118740349257096 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCACAGACTCTCGTATGCCGTCTTCTGC 1766 0.2510912373992294 Illumina PCR Primer Index 8 (95% over 23bp) GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 1496 0.21270242986933585 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1374 0.19535637609656917 No Hit CCTGTCTCTTATACACATCTGACGCACAGACTCTCGTATGCCGTCTTCTGC 1174 0.16692022237072215 RNA PCR Primer, Index 40 (96% over 25bp) GAATCTGTCTCTTATACACATCTGACGCACAGACTCTCGTATGCCGTCTTC 1169 0.16620931852757598 RNA PCR Primer, Index 40 (95% over 22bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCACAGACTCTCGTATGC 1109 0.15767847240982186 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACAGACTCTCGTATGCCG 1052 0.14957416859795544 No Hit CTGTCTCTTATACACATCTGACGCACAGACTCTCGTATGCCGTCTTCTGCT 998 0.14189640709197673 RNA PCR Primer, Index 40 (96% over 26bp) GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 967 0.13748880326447047 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.843615372584704E-4 0.0 0.0 0.1470149147626292 0.0 2 2.843615372584704E-4 0.0 0.0 0.7009511893421296 0.0 3 2.843615372584704E-4 0.0 0.0 1.0246967995108982 0.0 4 2.843615372584704E-4 0.0 0.0 1.4826610552656647 0.0 5 2.843615372584704E-4 0.0 0.0 2.8275489457296006 0.0 6 2.843615372584704E-4 0.0 0.0 3.5823866463822105 0.0 7 2.843615372584704E-4 0.0 0.0 4.3268451509248855 0.0 8 2.843615372584704E-4 0.0 0.0 5.474386134531443 0.0 9 4.2654230588770565E-4 0.0 0.0 5.928084967227333 0.0 10 5.687230745169408E-4 0.0 0.0 7.056715908606202 0.0 11 5.687230745169408E-4 0.0 0.0 8.461461902663046 0.0 12 5.687230745169408E-4 0.0 0.0 9.656206901454508 0.0 13 5.687230745169408E-4 0.0 0.0 10.114171157209276 0.0 14 5.687230745169408E-4 0.0 0.0 10.335404433196366 0.0 15 5.687230745169408E-4 0.0 0.0 10.705500973938266 0.0 16 5.687230745169408E-4 0.0 0.0 11.40574125943725 0.0 17 5.687230745169408E-4 0.0 0.0 12.195413248404021 0.0 18 5.687230745169408E-4 0.0 0.0 12.999872037308233 0.0 19 5.687230745169408E-4 0.0 0.0 13.581107019464547 0.0 20 7.109038431461761E-4 0.0 0.0 14.131773136365576 0.0 21 8.530846117754113E-4 0.0 0.0 14.797036952781767 0.0 22 9.952653804046465E-4 0.0 0.0 15.500831757496481 0.0 23 9.952653804046465E-4 0.0 0.0 16.197944066085622 0.0 24 9.952653804046465E-4 0.0 0.0 16.749605448367053 0.0 25 9.952653804046465E-4 0.0 0.0 17.29543741913469 0.0 26 9.952653804046465E-4 0.0 0.0 17.76904155943867 0.0 27 9.952653804046465E-4 0.0 0.0 18.299518007194347 0.0 28 9.952653804046465E-4 0.0 0.0 18.799709951231996 0.0 29 0.0011374461490338817 0.0 0.0 19.31980720287774 0.0 30 0.0011374461490338817 0.0 0.0 20.01478679993744 0.0 31 0.0011374461490338817 0.0 0.0 20.560618770705073 0.0 32 0.0011374461490338817 0.0 0.0 21.095929364594145 0.0 33 0.0011374461490338817 0.0 0.0 21.615742254702628 0.0 34 0.0011374461490338817 0.0 0.0 22.148351413987744 0.0 35 0.0012796269176631168 0.0 0.0 22.733709638434306 0.0 36 0.0012796269176631168 0.0 0.0 23.23646083630728 0.0 37 0.0012796269176631168 0.0 0.0 23.750870857207854 0.0 38 0.0012796269176631168 0.0 0.0 24.330826212446503 0.0 39 0.0014218076862923521 0.0 0.0 25.147086005146942 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATATGCG 55 1.8189894E-12 45.000004 1 TTCACGG 40 6.8084773E-9 45.0 2 CGCTAAT 20 7.031417E-4 45.0 15 GCGATAT 20 7.031417E-4 45.0 9 GTTCACG 35 1.2110286E-7 45.0 1 TATAGCG 40 6.8084773E-9 45.0 1 TTACGCG 35 1.2110286E-7 45.0 1 TACGTAG 40 6.8084773E-9 45.0 1 GCTATCG 25 3.8892573E-5 44.999996 1 GTCCGAC 25 3.8892573E-5 44.999996 26 ACATACG 105 0.0 40.714287 17 GCGTAAG 45 1.9264917E-8 40.0 1 ACGGGTA 85 0.0 39.705883 5 TAGTAGG 120 0.0 39.375004 2 GTTTACG 40 3.4556615E-7 39.375 1 GTTACGG 40 3.4556615E-7 39.375 2 CGTAAGG 80 0.0 39.375 2 GCTACGA 40 3.4556615E-7 39.375 10 TACGGTT 75 0.0 39.000004 33 ACGGGTG 75 0.0 39.000004 5 >>END_MODULE