##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934522.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 819415 Sequences flagged as poor quality 0 Sequence length 51 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.21460188060995 33.0 31.0 34.0 30.0 34.0 2 32.33623133577003 34.0 31.0 34.0 30.0 34.0 3 32.37904358597292 34.0 31.0 34.0 30.0 34.0 4 35.91969514836804 37.0 35.0 37.0 35.0 37.0 5 35.93737971601691 37.0 35.0 37.0 35.0 37.0 6 35.94969826034427 37.0 35.0 37.0 35.0 37.0 7 36.13988760274098 37.0 35.0 37.0 35.0 37.0 8 35.93901991054594 37.0 36.0 37.0 35.0 37.0 9 37.67670594265421 39.0 38.0 39.0 35.0 39.0 10 37.28611997583642 39.0 37.0 39.0 34.0 39.0 11 37.18197372515758 39.0 37.0 39.0 34.0 39.0 12 36.998465978777546 39.0 37.0 39.0 34.0 39.0 13 36.94052342219754 39.0 37.0 39.0 33.0 39.0 14 37.93997180915653 40.0 37.0 41.0 33.0 41.0 15 38.15390614035623 40.0 37.0 41.0 33.0 41.0 16 38.31849917319063 40.0 37.0 41.0 34.0 41.0 17 38.32327453122044 40.0 37.0 41.0 34.0 41.0 18 38.31650750840539 40.0 37.0 41.0 34.0 41.0 19 38.282183020813626 40.0 37.0 41.0 34.0 41.0 20 38.147787140826075 40.0 36.0 41.0 34.0 41.0 21 38.10352141466778 40.0 36.0 41.0 34.0 41.0 22 38.121779562248676 40.0 36.0 41.0 34.0 41.0 23 38.130931213121556 40.0 36.0 41.0 34.0 41.0 24 38.03769396459669 40.0 36.0 41.0 34.0 41.0 25 37.95314950299909 40.0 36.0 41.0 34.0 41.0 26 37.798863823581456 40.0 35.0 41.0 34.0 41.0 27 37.75875716212176 40.0 35.0 41.0 33.0 41.0 28 37.75600763959654 40.0 35.0 41.0 33.0 41.0 29 37.73844633061391 40.0 35.0 41.0 33.0 41.0 30 37.60707577967208 40.0 35.0 41.0 33.0 41.0 31 37.61018409475052 40.0 35.0 41.0 33.0 41.0 32 37.55130062300544 40.0 35.0 41.0 33.0 41.0 33 37.51734347064674 40.0 35.0 41.0 33.0 41.0 34 37.438352971327106 40.0 35.0 41.0 33.0 41.0 35 37.38444378001379 40.0 35.0 41.0 33.0 41.0 36 37.2732730057419 40.0 35.0 41.0 33.0 41.0 37 37.2165618154415 39.0 35.0 41.0 33.0 41.0 38 37.12499283025085 39.0 35.0 41.0 32.0 41.0 39 37.05941921980926 39.0 35.0 41.0 32.0 41.0 40 36.97760719537719 39.0 35.0 41.0 32.0 41.0 41 36.843422441619936 39.0 35.0 41.0 32.0 41.0 42 36.82539372601185 39.0 35.0 41.0 32.0 41.0 43 36.75939664272682 39.0 35.0 41.0 32.0 41.0 44 36.66387971906787 39.0 35.0 41.0 32.0 41.0 45 36.53771776206196 39.0 35.0 41.0 31.0 41.0 46 36.49171665151358 38.0 35.0 41.0 31.0 41.0 47 36.44379953991567 38.0 35.0 41.0 31.0 41.0 48 36.364195188030486 38.0 35.0 41.0 31.0 41.0 49 36.315431130745715 38.0 35.0 41.0 31.0 41.0 50 36.190283311874936 38.0 35.0 40.0 31.0 41.0 51 35.21551716773552 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 11.0 9 12.0 10 19.0 11 15.0 12 15.0 13 15.0 14 21.0 15 29.0 16 61.0 17 128.0 18 207.0 19 331.0 20 540.0 21 906.0 22 1243.0 23 1871.0 24 2746.0 25 3920.0 26 5207.0 27 6480.0 28 7677.0 29 9054.0 30 11083.0 31 14272.0 32 19250.0 33 29327.0 34 58582.0 35 65094.0 36 60721.0 37 90746.0 38 156187.0 39 273385.0 40 258.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.378367493882834 20.537456600135464 23.777573024657837 11.30660288132387 2 34.677422307377824 22.77417425846488 24.254254559655365 18.294148874501932 3 33.54832410927308 23.829073180256646 25.45364680900398 17.16895590146629 4 29.678978295491294 25.946559435694976 24.697863719848918 19.67659854896481 5 25.916904132826467 29.25526137549349 24.77133076646144 20.0565037252186 6 27.51633787519145 33.9414094201351 24.117083529103077 14.425169175570376 7 83.75231109999207 4.937424870181776 7.545749101493138 3.764514928333018 8 84.2984324182496 4.00102512158064 7.418219095330206 4.28232336483955 9 78.78791576917679 6.087025499899319 9.406954961771508 5.718103769152383 10 44.513829988467386 24.396429159827438 16.71948890366908 14.3702519480361 11 33.54185608025237 25.65037252186011 22.392560546243356 18.41521085164416 12 28.951752164654053 22.651525783638327 28.251740571017127 20.144981480690493 13 26.07689632237633 23.779037484058748 30.27354881226241 19.870517381302513 14 21.98214579913719 24.352129262949788 32.09106496708017 21.574659970832847 15 21.56990047777988 24.184204584978307 33.03625147208679 21.209643465155022 16 26.303399376384373 24.3189348498624 28.76478951447069 20.612876259282537 17 26.126565903723996 23.641256262089417 26.70087806544913 23.531299768737455 18 27.153640096898396 22.758187243338234 28.953216624054967 21.134956035708402 19 25.783516289059875 25.337100248347905 26.564683341164123 22.314700121428093 20 26.588358768145564 27.880133998035184 26.14511572280224 19.386391511017006 21 25.40263480653881 26.228589908654342 28.829713881244544 19.539061403562297 22 25.191996729374004 22.210235350829556 28.794078702488974 23.80368921730747 23 23.86275574647767 25.206153170249507 28.56196188744409 22.369129195828734 24 23.54643251588023 24.83784163091962 29.341176327013784 22.274549526186366 25 24.49247328887072 25.50368250520188 27.309605023095745 22.694239182831655 26 23.179585435951257 26.12046398955352 26.716621004008957 23.983329570486262 27 23.6333237736678 24.673211986600197 27.985941189751223 23.70752304998078 28 20.87123130526046 26.265323431960606 27.97093048089185 24.89251478188708 29 23.487976178127077 25.005766308891097 27.42883642598683 24.077421086994992 30 25.383840910893746 22.872293038326124 28.400505238493317 23.343360812286814 31 24.362380478756187 24.628545974872317 27.082613815954065 23.92645973041743 32 25.553108009982733 23.488708407827534 27.159253857935234 23.798929724254496 33 24.697985758132326 23.456856415857654 26.94593093853542 24.8992268874746 34 22.224879944838698 23.723265988540604 30.025567020374293 24.02628704624641 35 23.2982066474253 24.747167186346356 29.604656980894905 22.34996918533344 36 25.285966207599326 25.119750065595575 26.983518729825544 22.61076499697955 37 23.128329356919267 25.0494560143517 28.358157954150215 23.464056674578813 38 23.24267922847397 24.31673816076103 28.68753928107247 23.753043329692524 39 23.57913877583398 23.174825942898288 27.359030527876595 25.88700475339114 40 25.471342360098365 22.02229639437892 29.747685849050846 22.758675396471872 41 22.68264554590775 23.098185900917116 29.017774875978596 25.20139367719654 42 23.563639913840973 23.300159259959848 29.073668409780147 24.06253241641903 43 23.389247206848786 22.56487860241758 29.441369757692986 24.604504433040645 44 23.725340639358567 22.947834735756604 27.920894784693957 25.405929840190865 45 22.986642909880832 21.98666121562334 27.815697784394967 27.210998090100862 46 23.371063502620775 22.281871823190937 28.651782064033487 25.695282610154806 47 21.306785938748984 23.85970478939243 31.14587846207355 23.68763080978503 48 22.28809577564482 24.16187157911437 29.6289425992934 23.921090045947413 49 24.068878407156326 22.64078641469829 29.38425584105734 23.906079337088045 50 22.043897170542397 22.98383602936241 29.557672241782246 25.414594558312942 51 21.71939737495652 22.899141460676216 27.44933885759963 27.93212230676763 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 258.0 1 655.0 2 1052.0 3 2479.0 4 3906.0 5 2641.5 6 1377.0 7 1352.5 8 1328.0 9 1333.5 10 1339.0 11 1360.5 12 1382.0 13 1506.0 14 1630.0 15 1532.0 16 1434.0 17 1394.0 18 1354.0 19 1548.0 20 1742.0 21 1855.5 22 1969.0 23 2168.5 24 2368.0 25 2806.0 26 4018.0 27 4792.0 28 5660.0 29 6528.0 30 7972.0 31 9416.0 32 11208.5 33 13001.0 34 15551.0 35 18101.0 36 19899.5 37 21698.0 38 24433.5 39 27169.0 40 29259.0 41 31349.0 42 34626.5 43 37904.0 44 42513.0 45 47122.0 46 54504.5 47 61887.0 48 68541.5 49 75196.0 50 77767.0 51 80338.0 52 73386.5 53 66435.0 54 59978.0 55 53521.0 56 50313.5 57 47106.0 58 45911.5 59 44717.0 60 39902.5 61 35088.0 62 31435.5 63 27783.0 64 25701.0 65 23619.0 66 21281.5 67 18944.0 68 16649.5 69 14355.0 70 12052.0 71 9749.0 72 8649.0 73 7549.0 74 6206.0 75 4259.5 76 3656.0 77 2666.5 78 1677.0 79 1257.0 80 837.0 81 563.0 82 289.0 83 204.0 84 119.0 85 123.0 86 127.0 87 97.0 88 67.0 89 46.0 90 25.0 91 14.0 92 3.0 93 2.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 819415.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.895577372095044 #Duplication Level Percentage of deduplicated Percentage of total 1 70.72810890551126 21.14457652166677 2 10.583384907715034 6.327928047345156 3 4.014176813543596 3.6001840054368754 4 2.1271314294932204 2.543672889241188 5 1.2998102762723507 1.9429289341672147 6 1.0308052528255476 1.8489910914844891 7 0.7448212869691574 1.5586803689078899 8 0.6327928479078347 1.5134166036109638 9 0.5510602878664763 1.4826838925341093 >10 8.12368668053811 51.98198110702674 >50 0.11470734851249575 2.169797623271038 >100 0.04621303198858771 2.4258805952641334 >500 8.252327140819233E-4 0.18626460382634197 >1k 0.00247569814224577 1.2730137162171187 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 2618 0.31949622596608557 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2289 0.27934563072435825 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC 1665 0.20319374187682676 No Hit CCTGTCTCTTATACACATCTGACGCGTCTCTTGTCGTATGCCGTCTTCTGC 1369 0.1670704099876131 TruSeq Adapter, Index 23 (95% over 24bp) GCTGTCTCTTATACACATCTGACGCGTCTCTTGTCGTATGCCGTCTTCTGC 1366 0.16670429513738458 TruSeq Adapter, Index 23 (95% over 24bp) CTGTCTCTTATACACATCTGACGCGTCTCTTGTCGTATGCCGTCTTCTGCT 1013 0.12362478109382913 TruSeq Adapter, Index 20 (95% over 23bp) CGCTGTCTCTTATACACATCTGACGCGTCTCTTGTCGTATGCCGTCTTCTG 853 0.10409865574830825 TruSeq Adapter, Index 20 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.6611485022851667E-4 0.0 0.0 0.1291165038472569 0.0 2 3.6611485022851667E-4 0.0 0.0 0.5684543241214769 0.0 3 3.6611485022851667E-4 0.0 0.0 0.8816045593502682 0.0 4 4.8815313363802227E-4 0.0 0.0 1.2565061659842693 0.0 5 4.8815313363802227E-4 0.0 0.0 2.388045129757205 0.0 6 4.8815313363802227E-4 0.0 0.0 3.2323059743841642 0.0 7 6.101914170475279E-4 0.0 0.0 3.947694391730686 0.0 8 6.101914170475279E-4 0.0 0.0 5.02285166856843 0.0 9 6.101914170475279E-4 0.0 0.0 5.513445567874642 0.0 10 6.101914170475279E-4 0.0 0.0 6.474497049724499 0.0 11 6.101914170475279E-4 0.0 0.0 7.790435859729197 0.0 12 6.101914170475279E-4 0.0 0.0 8.746361733675855 0.0 13 6.101914170475279E-4 0.0 0.0 9.190092932152817 0.0 14 6.101914170475279E-4 0.0 0.0 9.438928992024799 0.0 15 6.101914170475279E-4 0.0 0.0 9.783809180940061 0.0 16 6.101914170475279E-4 0.0 0.0 10.392414100303265 0.0 17 6.101914170475279E-4 0.0 0.0 11.087544162603809 0.0 18 6.101914170475279E-4 0.0 0.0 11.808668379270577 0.0 19 7.322297004570333E-4 0.0 0.0 12.287546603369478 0.0 20 8.542679838665389E-4 0.0 0.0 12.772038588505215 0.0 21 8.542679838665389E-4 0.0 0.0 13.358310502004478 0.0 22 8.542679838665389E-4 0.0 0.0 13.988272120964346 0.0 23 8.542679838665389E-4 0.0 0.0 14.61200978747033 0.0 24 8.542679838665389E-4 0.0 0.0 15.130672491960729 0.0 25 8.542679838665389E-4 0.0 0.0 15.617117089631018 0.0 26 8.542679838665389E-4 0.0 0.0 16.06804854682914 0.0 27 8.542679838665389E-4 0.0 0.0 16.565232513439465 0.0 28 8.542679838665389E-4 0.0 0.0 17.020313272273512 0.0 29 8.542679838665389E-4 0.0 0.0 17.52189061708658 0.0 30 8.542679838665389E-4 0.0 0.0 18.270961600654125 0.0 31 9.763062672760445E-4 0.0 0.0 18.799021252967055 0.0 32 9.763062672760445E-4 0.0 0.0 19.306944588517418 0.0 33 9.763062672760445E-4 0.0 0.0 19.80534893796184 0.0 34 0.0010983445506855501 0.0 0.0 20.31058743127719 0.0 35 0.0010983445506855501 0.0 0.0 20.862810663705204 0.0 36 0.0010983445506855501 0.0 0.0 21.334732705649763 0.0 37 0.0010983445506855501 0.0 0.0 21.819712843919138 0.0 38 0.0012203828340950557 0.0 0.0 22.38487213438856 0.0 39 0.001342421117504561 0.0 0.0 23.30296614047827 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTACCG 20 7.0321007E-4 45.0 1 TATAGCG 25 3.8898223E-5 45.0 1 CACACGA 25 3.8898223E-5 45.0 34 CGACTCA 20 7.0321007E-4 45.0 34 AATACGA 20 7.0321007E-4 45.0 15 TATACGG 30 2.1647375E-6 44.999996 2 GCGATAT 55 6.002665E-11 40.909092 9 GGCTACG 45 1.9272193E-8 40.0 1 ACGGGTA 85 0.0 39.705883 5 ATTAGTC 75 0.0 39.0 31 CGGTAGT 205 0.0 38.414635 12 CGTAAGG 165 0.0 38.181816 2 CGTTGAT 65 9.094947E-12 38.07692 25 CGTTAGG 90 0.0 37.5 2 ACACGAA 30 1.1396362E-4 37.499996 35 AATGCCG 30 1.1396362E-4 37.499996 1 CGTACTG 30 1.1396362E-4 37.499996 38 CGATACG 30 1.1396362E-4 37.499996 10 CGTTTTT 1090 0.0 37.362385 1 TACGGGA 205 0.0 37.317074 4 >>END_MODULE