SRR2934521.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934521.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	746432
Sequences flagged as poor quality	0
Sequence length	51
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTGTCTCTTATACACATCTGACGCGTTGCTAGTCGTATGCCGTCTTCTGC	1590	0.2130133756323416	No Hit
GCTGTCTCTTATACACATCTGACGCGTTGCTAGTCGTATGCCGTCTTCTGC	1493	0.20001822001200378	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1163	0.15580789676755552	No Hit
CTGTCTCTTATACACATCTGACGCGTTGCTAGTCGTATGCCGTCTTCTGCT	1078	0.14442038926519762	No Hit
GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG	1059	0.1418749464117294	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAACGCC	30	2.1644737E-6	45.000004	12
ATAACGC	30	2.1644737E-6	45.000004	11
ACGATTC	20	7.031696E-4	45.0	30
GTATACG	25	3.889487E-5	45.0	1
CCAACGG	40	6.8102963E-9	45.0	2
CGGTATG	20	7.031696E-4	45.0	37
CCGTAGG	55	6.002665E-11	40.909092	2
TAGACGG	95	0.0	40.26316	2
CGTTAGG	95	0.0	40.26316	2
CGTAAGG	95	0.0	40.26316	2
TGTTACG	40	3.4560435E-7	39.375	1
CCGGTAT	40	3.4560435E-7	39.375	42
TCTTGCG	35	6.2453455E-6	38.571426	1
ACCGGTA	35	6.2453455E-6	38.571426	41
TCGTAAG	35	6.2453455E-6	38.571426	1
GTTTGCG	60	1.546141E-10	37.500004	1
CGTATGT	30	1.13953814E-4	37.500004	36
CGGCCTA	30	1.13953814E-4	37.500004	44
TGCGCAC	30	1.13953814E-4	37.500004	13
CGAATAT	30	1.13953814E-4	37.500004	14