##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934520.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 810162 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.119724203307484 33.0 31.0 34.0 30.0 34.0 2 32.23934225500579 33.0 31.0 34.0 30.0 34.0 3 32.29280810504566 34.0 31.0 34.0 30.0 34.0 4 35.85599546757315 37.0 35.0 37.0 35.0 37.0 5 35.889112300996594 37.0 35.0 37.0 35.0 37.0 6 35.908823173636875 37.0 35.0 37.0 35.0 37.0 7 36.10618493585233 37.0 35.0 37.0 35.0 37.0 8 35.89968179203665 37.0 35.0 37.0 35.0 37.0 9 37.63199705737865 39.0 38.0 39.0 35.0 39.0 10 37.18192410900536 39.0 37.0 39.0 34.0 39.0 11 37.11104569209615 39.0 37.0 39.0 34.0 39.0 12 36.9891626612949 39.0 37.0 39.0 33.0 39.0 13 36.9519034464712 39.0 37.0 39.0 33.0 39.0 14 38.04932346863961 40.0 37.0 41.0 33.0 41.0 15 38.23276826116258 40.0 37.0 41.0 33.0 41.0 16 38.35400944502457 40.0 37.0 41.0 34.0 41.0 17 38.35981939414586 40.0 37.0 41.0 34.0 41.0 18 38.315491222743105 40.0 37.0 41.0 34.0 41.0 19 38.25603274406847 40.0 37.0 41.0 34.0 41.0 20 38.1275683134978 40.0 36.0 41.0 34.0 41.0 21 38.097291652780555 40.0 36.0 41.0 34.0 41.0 22 38.108405479397945 40.0 36.0 41.0 34.0 41.0 23 38.13442866982159 40.0 36.0 41.0 34.0 41.0 24 38.02576645164794 40.0 36.0 41.0 34.0 41.0 25 37.9291684872902 40.0 36.0 41.0 34.0 41.0 26 37.78309029552114 40.0 36.0 41.0 33.0 41.0 27 37.719821467805204 40.0 35.0 41.0 33.0 41.0 28 37.71850691590077 40.0 35.0 41.0 33.0 41.0 29 37.700236495910694 40.0 35.0 41.0 33.0 41.0 30 37.56784569012124 40.0 35.0 41.0 33.0 41.0 31 37.55611840594844 40.0 35.0 41.0 33.0 41.0 32 37.46849272120885 40.0 35.0 41.0 33.0 41.0 33 37.389256716557924 40.0 35.0 41.0 33.0 41.0 34 37.29133679436952 40.0 35.0 41.0 33.0 41.0 35 37.25361841212005 40.0 35.0 41.0 33.0 41.0 36 37.163142680105956 40.0 35.0 41.0 32.0 41.0 37 37.122120020440356 40.0 35.0 41.0 32.0 41.0 38 37.0228448137533 39.0 35.0 41.0 32.0 41.0 39 36.95233175587105 39.0 35.0 41.0 32.0 41.0 40 36.8496399485535 39.0 35.0 41.0 32.0 41.0 41 36.758653207630076 39.0 35.0 41.0 31.0 41.0 42 36.706417975664124 39.0 35.0 41.0 31.0 41.0 43 36.624766404743745 39.0 35.0 41.0 31.0 41.0 44 36.51364295042226 39.0 35.0 41.0 31.0 41.0 45 36.3801486616257 39.0 35.0 41.0 31.0 41.0 46 36.29212058822803 38.0 35.0 41.0 31.0 41.0 47 36.25135960462229 38.0 35.0 41.0 31.0 41.0 48 36.174140480545866 38.0 35.0 40.0 31.0 41.0 49 36.10626886968285 38.0 35.0 40.0 31.0 41.0 50 35.96295185407363 38.0 35.0 40.0 30.0 41.0 51 34.91103631125627 36.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 11.0 10 15.0 11 18.0 12 19.0 13 17.0 14 31.0 15 33.0 16 63.0 17 105.0 18 163.0 19 297.0 20 553.0 21 841.0 22 1372.0 23 2023.0 24 3066.0 25 4500.0 26 6178.0 27 7369.0 28 8176.0 29 9440.0 30 11273.0 31 14644.0 32 19160.0 33 27955.0 34 54855.0 35 67819.0 36 60084.0 37 90594.0 38 156884.0 39 262343.0 40 255.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.15692417072141 20.84015295706291 24.818369659401455 11.184553212814228 2 33.30815318417798 22.988982450423496 25.551679787499292 18.151184577899233 3 31.69724079875383 23.520851385278498 27.46253218492104 17.31937563104663 4 27.550539274861073 26.186614528946063 26.60727113836492 19.65557505782794 5 24.891194600586054 29.50200083440102 26.058615437406345 19.548189127606577 6 26.39385703106292 34.06084215255714 24.769984274749987 14.775316541629946 7 81.90596448611512 5.176618997188217 8.382397594555163 4.535018922141497 8 83.11658655923137 3.892307958161454 8.160343239993976 4.830762242613205 9 77.67804463798599 5.8998076927824314 10.560233632285888 5.861914036945697 10 42.77576583448742 23.421118245486706 18.19142344370632 15.61169247631955 11 31.32694448764568 24.22169887010252 24.24120114248755 20.210155499764245 12 27.468827222209878 21.17885064962316 29.94055509885677 21.411767029310187 13 24.60927567572905 23.332493995028155 31.549986299036487 20.508244030206306 14 21.41818549870273 25.476139340033228 31.749822874931187 21.35585228633286 15 19.904784475203723 24.33229403502016 34.55099103636063 21.21193045341549 16 23.607130425766698 23.300278215961747 31.163767246550687 21.928824111720864 17 23.59034365966313 23.608364746803726 28.183499102648607 24.61779249088454 18 24.389072802723405 22.930969361683218 31.166976481246962 21.512981354346415 19 24.112091162014508 25.87704681285965 27.735317134104044 22.275544891021795 20 24.60507898420316 26.176246232235034 27.830483286058836 21.388191497502966 21 23.010706500675173 26.00887229961415 30.21988194953602 20.760539250174656 22 22.613872287270944 23.624534352388782 28.62217679920806 25.139416561132215 23 21.36547999042167 25.10806480679173 29.242299688210505 24.284155514576096 24 21.805885736432963 24.229598524739497 30.74706046445032 23.217455274377226 25 22.62436401608567 25.507367662270013 28.024641985183212 23.843626336461103 26 21.812797934240315 25.895931924726167 27.919971561243308 24.371298579790217 27 21.977826656890844 25.34394355696762 28.434930297891036 24.243299488250496 28 19.89367558587048 25.367025360360028 28.984079727264422 25.75521932650507 29 21.849827565351127 23.391741404805458 28.72684722314796 26.03158380669545 30 23.171661963903514 25.136083894332245 27.337742328077596 24.354511813686646 31 23.00613951283817 26.633562176453594 25.439726869440925 24.920571441267303 32 23.908181326697623 25.52119205788472 24.865891019326998 25.70473559609066 33 22.525371468916095 26.182170973212767 25.45577304292228 25.83668451494886 34 21.39053670747332 25.71744910277204 26.689476919430927 26.20253727032371 35 21.47879066162076 24.840217141756835 27.610650709364297 26.0703414872581 36 23.04600808233415 27.93108045057655 24.91649818184511 24.106413285244184 37 20.766587423256087 27.758769233807563 26.496552541343583 24.978090801592767 38 20.100671223779937 27.903431659347145 26.820685245666915 25.175211871206006 39 21.17564141492689 26.446192243032872 26.09663252534678 26.281533816693454 40 22.71607406913679 23.99705244136358 28.491091905075777 24.795781584423857 41 21.25834092440771 24.693456370454303 27.427724331676874 26.62047837346111 42 21.48459197049479 25.524648156788395 28.08833295069381 24.902426922023004 43 21.468792661220842 25.063258953147642 28.226330042633446 25.241618342998066 44 21.233160775252358 24.634826121195513 26.986948289354473 27.145064814197656 45 21.631723038108426 23.960146242356466 26.357074264159515 28.05105645537559 46 22.785689775625123 24.735299853609526 26.941772139399276 25.53723823136607 47 20.177569424386725 25.553284404847425 28.99938530812356 25.269760862642286 48 20.401351828399754 25.170768315472706 28.214727424885393 26.213152431242147 49 21.484715402598493 24.140233681658728 29.34314371693563 25.03190719880715 50 20.716720853360194 23.64156798269976 28.834109721265623 26.80760144267443 51 19.817147681574795 24.000385108163552 26.731567266793554 29.450899943468094 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 379.0 1 666.5 2 954.0 3 2836.0 4 4718.0 5 3237.5 6 1757.0 7 1774.5 8 1792.0 9 1858.0 10 1924.0 11 1976.5 12 2029.0 13 2041.0 14 2053.0 15 2046.0 16 2039.0 17 1921.5 18 1804.0 19 1989.0 20 2174.0 21 2308.0 22 2442.0 23 2588.0 24 2734.0 25 3498.0 26 4577.0 27 4892.0 28 5692.5 29 6493.0 30 7761.0 31 9029.0 32 10779.5 33 12530.0 34 15133.0 35 17736.0 36 19463.0 37 21190.0 38 23319.5 39 25449.0 40 28868.0 41 32287.0 42 36459.0 43 40631.0 44 44738.5 45 48846.0 46 57076.0 47 65306.0 48 76314.0 49 87322.0 50 85497.5 51 83673.0 52 73701.5 53 63730.0 54 56587.5 55 49445.0 56 45219.0 57 40993.0 58 38340.0 59 35687.0 60 33725.5 61 31764.0 62 28706.5 63 25649.0 64 23542.5 65 21436.0 66 19209.0 67 16982.0 68 15099.5 69 13217.0 70 11057.0 71 8897.0 72 7532.0 73 6167.0 74 5068.0 75 3288.5 76 2608.0 77 2071.0 78 1534.0 79 1234.5 80 935.0 81 614.0 82 293.0 83 291.0 84 289.0 85 176.0 86 63.0 87 53.0 88 43.0 89 28.0 90 13.0 91 7.0 92 1.0 93 1.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 810162.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.49803798211645 #Duplication Level Percentage of deduplicated Percentage of total 1 72.42528737585637 23.536797400062795 2 11.447226088126413 7.44024776403613 3 4.15441287789459 4.050308024976363 4 2.025885762224062 2.63349249792746 5 1.2198315098908286 1.9821065370107305 6 0.8575414045666231 1.6721047882106166 7 0.6373629251611691 1.4499131185196363 8 0.5121289444311005 1.3314548710290486 9 0.4119184451852296 1.204788714944755 >10 6.075541226168442 46.993815672789516 >50 0.18406202757081203 3.6873966817654313 >100 0.044958781985402735 2.5844743885659627 >500 0.0019213154694616532 0.4128465562716982 >1k 0.0019213154694616532 1.0202529838898289 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2773 0.3422772235676321 No Hit GCTGTCTCTTATACACATCTGACGCGCACACTATCGTATGCCGTCTTCTGC 1818 0.22439956453153814 TruSeq Adapter, Index 13 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCGCACACTATCGTATGCCGTCTTCTGC 1250 0.1542901296283953 TruSeq Adapter, Index 13 (95% over 22bp) CTGTCTCTTATACACATCTGACGCGCACACTATCGTATGCCGTCTTCTGCT 1227 0.15145119124323284 Illumina PCR Primer Index 1 (95% over 21bp) CGCTGTCTCTTATACACATCTGACGCGCACACTATCGTATGCCGTCTTCTG 1102 0.1360221782803933 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.2343210370271623E-4 0.0 0.0 0.16058516691723385 0.0 2 1.2343210370271623E-4 0.0 0.0 0.7065253615943478 0.0 3 1.2343210370271623E-4 0.0 0.0 1.1074328344207702 0.0 4 1.2343210370271623E-4 0.0 0.0 1.665963103675561 0.0 5 1.2343210370271623E-4 0.0 0.0 3.128880396760154 0.0 6 1.2343210370271623E-4 0.0 0.0 4.174844043536972 0.0 7 1.2343210370271623E-4 0.0 0.0 5.055285239248446 0.0 8 1.2343210370271623E-4 0.0 0.0 6.522892952273743 0.0 9 1.2343210370271623E-4 0.0 0.0 7.0457513435584485 0.0 10 1.2343210370271623E-4 0.0 0.0 8.307227443400208 0.0 11 1.2343210370271623E-4 0.0 0.0 10.12772754091157 0.0 12 1.2343210370271623E-4 0.0 0.0 11.464250359804582 0.0 13 1.2343210370271623E-4 0.0 0.0 12.040061123577754 0.0 14 1.2343210370271623E-4 0.0 0.0 12.27890224424251 0.0 15 1.2343210370271623E-4 0.0 0.0 12.68203149493558 0.0 16 1.2343210370271623E-4 0.0 0.0 13.523221281669592 0.0 17 1.2343210370271623E-4 0.0 0.0 14.546349989261406 0.0 18 1.2343210370271623E-4 0.0 0.0 15.596386895460414 0.0 19 1.2343210370271623E-4 0.0 0.0 16.269832453262435 0.0 20 1.2343210370271623E-4 0.0 0.0 16.93031764017567 0.0 21 1.2343210370271623E-4 0.0 0.0 17.80285918125017 0.0 22 1.2343210370271623E-4 0.0 0.0 18.70440726669481 0.0 23 1.2343210370271623E-4 0.0 0.0 19.638911723828073 0.0 24 1.2343210370271623E-4 0.0 0.0 20.355064789511232 0.0 25 1.2343210370271623E-4 0.0 0.0 20.99024639516541 0.0 26 1.2343210370271623E-4 0.0 0.0 21.591977900716152 0.0 27 1.2343210370271623E-4 0.0 0.0 22.16976357814857 0.0 28 1.2343210370271623E-4 0.0 0.0 22.76236110802531 0.0 29 2.4686420740543247E-4 0.0 0.0 23.397789577886893 0.0 30 2.4686420740543247E-4 0.0 0.0 24.16874649761406 0.0 31 3.7029631110814873E-4 0.0 0.0 24.830836301875426 0.0 32 3.7029631110814873E-4 0.0 0.0 25.440467462063143 0.0 33 3.7029631110814873E-4 0.0 0.0 26.03466960928802 0.0 34 3.7029631110814873E-4 0.0 0.0 26.591101532779863 0.0 35 3.7029631110814873E-4 0.0 0.0 27.24887121341164 0.0 36 3.7029631110814873E-4 0.0 0.0 27.84912153371795 0.0 37 3.7029631110814873E-4 0.0 0.0 28.4513467676835 0.0 38 3.7029631110814873E-4 0.0 0.0 29.074555459278514 0.0 39 3.7029631110814873E-4 0.0 0.0 29.84415462586495 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGACG 25 3.8897822E-5 45.000004 1 CACGAAC 25 3.8897822E-5 45.000004 25 AATACCG 20 7.032052E-4 45.0 1 ACCGGTA 30 2.1647065E-6 44.999996 41 GCGTTAG 60 0.0 44.999996 1 TATCGCG 30 2.1647065E-6 44.999996 1 TACCGGT 30 2.1647065E-6 44.999996 40 CCATACG 60 3.6379788E-12 41.249996 2 CGTTTTT 1825 0.0 41.178085 1 GTGATAG 110 0.0 40.909092 1 CGAACCC 50 1.0804797E-9 40.500004 19 TTGTACG 40 3.4565346E-7 39.375 1 CACACGG 40 3.4565346E-7 39.375 2 CGGTATT 40 3.4565346E-7 39.375 43 CGTTAGG 120 0.0 39.374996 2 TGTACGG 105 0.0 38.57143 2 AATAGGG 395 0.0 38.164555 3 TCGTTTG 30 1.1396246E-4 37.499996 1 CGACATT 30 1.1396246E-4 37.499996 20 GTAATCG 30 1.1396246E-4 37.499996 42 >>END_MODULE