SRR2934433.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934433.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2075658
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	15869	0.7645286458559166	No Hit
TCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTGC	9898	0.4768608316013524	No Hit
CTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTGCT	9689	0.4667917354400388	No Hit
GCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTGC	7160	0.34495085413878396	No Hit
CCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTGC	5173	0.24922217436591193	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCC	4397	0.21183643933634538	No Hit
TCCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTG	3266	0.15734769408062407	No Hit
TTCCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCT	2734	0.1317172674881893	No Hit
TGCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTG	2284	0.11003739537052828	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGACCGT	25	3.8918955E-5	45.000004	23
ACGGGTA	25	3.8918955E-5	45.000004	5
CGTAGCA	35	1.2125565E-7	45.000004	17
TCGCTAT	25	3.8918955E-5	45.000004	25
ATAGGCG	20	7.0346025E-4	45.0	13
CGTTTTT	6790	0.0	43.608246	1
TCGTTCA	200	0.0	41.625004	16
CGGGTAT	425	0.0	40.764706	6
TTCCGCG	230	0.0	40.1087	1
GCGATTC	450	0.0	39.5	9
TACGGGC	80	0.0	39.375	4
TCGAACG	40	3.460027E-7	39.375	22
TGGGCGA	2505	0.0	39.251495	6
TAGTGCG	75	0.0	39.0	1
TTTGTCG	595	0.0	38.94958	1
TTTTGCG	1930	0.0	38.704662	1
TTTCGCG	665	0.0	38.571426	1
TTCTTCG	735	0.0	38.265305	1
TTTGGGA	14945	0.0	38.179993	4
TTGGGAC	6590	0.0	38.069042	5