SRR2934432.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934432.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1941052
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCTTCTGC	5109	0.26320778629320596	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5029	0.25908630989793163	No Hit
CCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCTTCTGC	4991	0.25712860861017633	No Hit
CTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCTTCTGCT	4654	0.2397668892950833	No Hit
GCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCTTCTGC	3892	0.20050982663009542	No Hit
GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG	2338	0.12045014765189187	No Hit
TCCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCTTCTG	2258	0.11632867125661754	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCG	2183	0.11246478713604786	No Hit
CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA	2073	0.1067977570925457	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGC	2022	0.10417031589055831	No Hit
GAATCTGTCTCTTATACACATCTGACGCGTTCTGCTTCGTATGCCGTCTTC	1985	0.10226413305774394	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACCGGTA	55	1.8189894E-12	45.0	41
CTACGGT	20	7.0344907E-4	45.0	16
CTACCGT	20	7.0344907E-4	45.0	28
TACTACG	20	7.0344907E-4	45.0	8
TACGGGT	60	3.6379788E-12	41.250004	4
CGTTTTT	2565	0.0	40.964912	1
TTTGGGA	10345	0.0	39.54084	4
TTGGGAC	4135	0.0	38.52479	5
TGCGGGA	2325	0.0	38.225807	4
TTTGTCG	660	0.0	38.181816	1
TACCGGT	65	9.094947E-12	38.076927	40
TCTTGCG	635	0.0	37.913387	1
TCGTTCG	280	0.0	37.76786	1
TTTGGGC	3850	0.0	37.753246	4
TTGGGAT	6395	0.0	37.68178	5
GGTACCG	60	1.5643309E-10	37.500004	8
CGAACGA	60	1.5643309E-10	37.500004	22
GACCGTA	30	1.1402115E-4	37.500004	17
CGTTAGG	30	1.1402115E-4	37.500004	2
CGACTCG	30	1.1402115E-4	37.500004	30