##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934429.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2029320 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.09962253365659 33.0 31.0 34.0 30.0 34.0 2 32.32390406638677 34.0 31.0 34.0 30.0 34.0 3 32.32354039776871 34.0 31.0 34.0 30.0 34.0 4 35.89588729229496 37.0 35.0 37.0 35.0 37.0 5 35.88643141544951 37.0 35.0 37.0 35.0 37.0 6 35.58553949106105 37.0 35.0 37.0 33.0 37.0 7 35.93583121439694 37.0 35.0 37.0 35.0 37.0 8 36.02620483708829 37.0 35.0 37.0 35.0 37.0 9 37.81368832909546 39.0 38.0 39.0 35.0 39.0 10 37.209722468610174 39.0 37.0 39.0 34.0 39.0 11 37.10472276427572 39.0 37.0 39.0 33.0 39.0 12 37.07878156229673 39.0 37.0 39.0 33.0 39.0 13 37.08700155717186 39.0 37.0 39.0 33.0 39.0 14 38.31476356612067 40.0 38.0 41.0 33.0 41.0 15 38.312142491080756 40.0 38.0 41.0 33.0 41.0 16 38.308827094790374 40.0 38.0 41.0 34.0 41.0 17 38.23129274830978 40.0 38.0 41.0 33.0 41.0 18 38.09819348353143 39.0 37.0 41.0 33.0 41.0 19 38.02737912207045 40.0 37.0 41.0 34.0 41.0 20 37.8651903100546 39.0 36.0 41.0 34.0 41.0 21 37.72313139376737 39.0 36.0 41.0 33.0 41.0 22 37.79827134212446 39.0 36.0 41.0 33.0 41.0 23 37.7347717462007 39.0 36.0 41.0 33.0 41.0 24 37.67409723454162 39.0 36.0 41.0 33.0 41.0 25 37.62075473557645 39.0 36.0 41.0 33.0 41.0 26 37.57080943370193 39.0 36.0 41.0 33.0 41.0 27 37.48037076459109 39.0 35.0 41.0 33.0 41.0 28 37.35418711686673 39.0 35.0 41.0 33.0 41.0 29 37.26077750182327 39.0 35.0 41.0 32.0 41.0 30 37.1638903672166 39.0 35.0 41.0 32.0 41.0 31 37.00716249778251 39.0 35.0 41.0 31.0 41.0 32 36.71809473124002 39.0 35.0 41.0 31.0 41.0 33 36.4391446395837 39.0 35.0 41.0 30.0 41.0 34 36.1390593893521 39.0 35.0 41.0 29.0 41.0 35 35.98387489405318 39.0 35.0 41.0 28.0 41.0 36 35.77244200027595 39.0 35.0 41.0 27.0 41.0 37 35.69576163443912 39.0 35.0 41.0 26.0 41.0 38 35.61503163621312 39.0 35.0 41.0 26.0 41.0 39 35.55912029645398 39.0 35.0 40.0 25.0 41.0 40 35.48431691404017 39.0 35.0 40.0 25.0 41.0 41 35.41892013088128 39.0 35.0 40.0 24.0 41.0 42 35.352883231821494 39.0 35.0 40.0 24.0 41.0 43 35.29377870419648 39.0 35.0 40.0 24.0 41.0 44 35.13366842094889 38.0 34.0 40.0 23.0 41.0 45 35.167796109041454 38.0 34.0 40.0 23.0 41.0 46 35.043407643939844 38.0 34.0 40.0 23.0 41.0 47 34.82131699288431 38.0 34.0 40.0 23.0 41.0 48 34.71791437525871 38.0 34.0 40.0 23.0 41.0 49 34.693419470561565 38.0 34.0 40.0 23.0 41.0 50 34.611005657067395 38.0 34.0 40.0 23.0 41.0 51 33.726577868448544 37.0 32.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 14.0 10 20.0 11 16.0 12 13.0 13 21.0 14 24.0 15 50.0 16 84.0 17 209.0 18 548.0 19 1011.0 20 1946.0 21 3147.0 22 5228.0 23 8302.0 24 14357.0 25 24080.0 26 33837.0 27 35973.0 28 34087.0 29 33916.0 30 37461.0 31 44534.0 32 55540.0 33 72700.0 34 108586.0 35 140057.0 36 169434.0 37 250953.0 38 432008.0 39 520980.0 40 182.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.139839946385983 4.098220093430312 55.4722764275718 19.289663532611907 2 25.044596219423255 4.1251256578558335 50.34750556836774 20.482772554353183 3 18.005440245993732 3.913823349693493 56.70554668558926 21.375189718723515 4 16.555594977627976 4.194557782902647 56.043650089685215 23.206197149784163 5 16.702787140519977 4.968068121341139 56.0709005972444 22.258244140894487 6 19.475686436835986 5.50204009224765 58.4587448012142 16.563528669702166 7 79.6815682100408 1.5125756411014526 14.868872331618475 3.9369838172392724 8 81.9793822561252 1.6904677428892436 12.556373563558237 3.7737764374273155 9 76.94981570181145 4.264729071807305 14.396546626456153 4.388908599925098 10 33.312636745313704 28.894555811799027 23.35289653677094 14.439910906116335 11 21.101846924092797 24.61869000453354 34.223927226854315 20.055535844519344 12 18.904805550627795 22.10444878087241 37.9834624406205 21.007283227879288 13 20.12831884572172 22.21931484438137 39.00976681844164 18.642599491455268 14 18.502109080874384 24.299174107582836 37.61964598978969 19.5790708217531 15 17.45215145960223 25.89926674945302 37.69819446908324 18.950387321861513 16 18.84424339187511 25.18897955965545 36.012260264522105 19.954516783947334 17 19.372794827824098 25.633709814124927 34.19534622435101 20.798149133699958 18 19.326671003094635 24.62238582382276 36.07035854374864 19.980584629333965 19 19.92174718624958 26.894821910787854 33.84010407427118 19.343326828691385 20 21.11692586679282 26.951934638203927 33.95102793053831 17.98011156446494 21 21.384108962608163 26.495919815504703 34.299666883488065 17.82030433839907 22 20.46577178562277 24.092799558472787 34.1027043541679 21.33872430173654 23 18.864890702304223 25.646226322117755 33.53719472532671 21.951688250251316 24 19.15981708158398 25.522441014724144 34.46622513945558 20.851516764236298 25 18.92466441960854 26.907141308418588 32.4290895472375 21.739104724735377 26 19.524027753138984 27.435002858100248 32.66261604872568 20.378353340035087 27 19.772288254193523 26.292649754597598 33.78747560759269 20.147586383616186 28 18.593716121656513 25.238602093312046 35.09037510101906 21.077306684012378 29 19.669741588315297 23.595933613230045 34.94732225573098 21.78700254272367 30 20.850038436520606 24.98841976622711 33.95851812429779 20.203023672954487 31 19.723454161985295 26.863136420081602 32.44914552658033 20.96426389135277 32 19.287988094534132 27.332801135355684 32.23197918514577 21.14723158496442 33 19.979451244751935 26.51188575483413 31.5603749039087 21.948288096505234 34 18.704196479608935 26.663315790511106 31.600585417775413 23.031902312104545 35 19.859903810143297 26.36962135099442 30.623558630477206 23.146916208385075 36 20.90434234127688 27.51384700293694 29.839453610076283 21.74235704570989 37 18.84286361934047 27.388731200599214 32.3766581909211 21.391746989139218 38 17.75565213963298 28.34806733289969 32.616196558453076 21.280083969014253 39 18.213145290047898 27.350590345534464 31.515335186170734 22.9209291782469 40 19.372055663966254 27.599787120808937 29.94574537283425 23.082411842390556 41 18.948416218240595 27.68690990085349 29.133798513787866 24.23087536711805 42 20.36716732698638 26.645674413103897 29.568968915695898 23.418189344213825 43 20.243135631640154 25.77814243194765 31.269834230185477 22.708887706226715 44 19.771154869611497 25.723000808152484 30.758529950919524 23.7473143713165 45 20.962933396408648 25.07623243253898 29.972552382078728 23.988281788973648 46 21.260668598348214 26.09149863008298 29.956734275520862 22.69109849604794 47 19.313415331243963 26.04660674511659 31.785327104645887 22.854650818993555 48 18.883616186702934 25.53865334200619 32.34512053298642 23.232609938304456 49 19.65594386296888 24.646876786312657 32.48373839512743 23.213440955591036 50 19.183421047444465 24.340173062897914 31.653509549997043 24.822896339660577 51 18.412325310941597 24.235655293398775 30.3792403366645 26.972779058995133 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 308.0 1 890.5 2 1473.0 3 19209.5 4 36946.0 5 25281.0 6 13616.0 7 13553.0 8 13490.0 9 14005.5 10 14521.0 11 14826.5 12 15132.0 13 15157.0 14 15182.0 15 14674.5 16 14167.0 17 13726.0 18 13285.0 19 13030.5 20 12776.0 21 12777.5 22 12779.0 23 13600.0 24 14421.0 25 15948.0 26 20095.5 27 22716.0 28 26778.5 29 30841.0 30 35428.5 31 40016.0 32 44885.5 33 49755.0 34 57985.5 35 66216.0 36 72269.5 37 78323.0 38 83818.0 39 89313.0 40 97217.0 41 105121.0 42 116984.0 43 128847.0 44 142633.5 45 156420.0 46 178085.0 47 199750.0 48 213080.0 49 226410.0 50 210160.5 51 193911.0 52 165683.0 53 137455.0 54 115678.5 55 93902.0 56 80155.0 57 66408.0 58 58702.5 59 50997.0 60 42961.0 61 34925.0 62 29292.0 63 23659.0 64 20174.5 65 16690.0 66 12798.5 67 8907.0 68 7222.5 69 5538.0 70 4556.0 71 3574.0 72 2631.0 73 1688.0 74 1484.0 75 932.0 76 584.0 77 406.5 78 229.0 79 142.5 80 56.0 81 75.5 82 95.0 83 77.0 84 59.0 85 48.0 86 37.0 87 21.5 88 6.0 89 10.5 90 15.0 91 10.0 92 5.0 93 3.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2029320.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.92967314597043 #Duplication Level Percentage of deduplicated Percentage of total 1 74.57366683142908 26.048338077183146 2 10.943405025992396 7.64499121323769 3 4.061385577852142 4.255886122624007 4 2.003244483195124 2.798907001178966 5 1.2193277658809798 2.129536016001449 6 0.833882006768292 1.747633556323341 7 0.6210901071384842 1.5186132105580108 8 0.4746828772865288 1.3264414201285795 9 0.4105688965312812 1.2906933623765466 >10 4.4061063024350515 34.58406599950604 >50 0.3854169522985814 8.488330926162396 >100 0.06107321212082776 3.7419003447991734 >500 0.003003469360326474 0.6948052876954457 >1k 0.002717424659343 2.0345585380129942 >5k 2.860447009834737E-4 0.5445838683612347 >10k+ 1.4302235049173684E-4 1.1507150558510852 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 23034 1.135060020105257 No Hit CTGTCTCTTATACACATCTGACGCGGTTACACTCGTATGCCGTCTTCTGCT 5508 0.2714209686003193 TruSeq Adapter, Index 16 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCGGTTACACTCGTATGCCGTCTTCTGC 5393 0.2657540456901819 TruSeq Adapter, Index 13 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCGGTTACACTCGTATGCCGTCTTCTGC 4118 0.20292511777344138 TruSeq Adapter, Index 13 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCGGTTACACTCGTATGCCGTCTTCTGC 3857 0.19006366664695562 TruSeq Adapter, Index 13 (95% over 22bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGTTACACTCGTATGCC 3267 0.1609898882384247 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGGTTACACTCGTATGCCGTCTT 3221 0.15872311907436976 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGGTTACACTCGTATGCCGTCT 3058 0.15069087181913154 No Hit CGTTCTGTCTCTTATACACATCTGACGCGGTTACACTCGTATGCCGTCTTC 3006 0.148128437111939 No Hit CGCTGTCTCTTATACACATCTGACGCGGTTACACTCGTATGCCGTCTTCTG 2329 0.11476750832791281 No Hit TCCTGTCTCTTATACACATCTGACGCGGTTACACTCGTATGCCGTCTTCTG 2302 0.1134370133837936 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.927759052293379E-5 0.0 0.0 0.2958626534996945 0.0 2 4.927759052293379E-5 0.0 0.0 1.0418268188358661 0.0 3 4.927759052293379E-5 0.0 0.0 1.6162556915617055 0.0 4 4.927759052293379E-5 0.0 0.0 2.3740464786233813 0.0 5 4.927759052293379E-5 0.0 0.0 3.635651351191532 0.0 6 4.927759052293379E-5 0.0 0.0 4.759180415114423 0.0 7 4.927759052293379E-5 0.0 0.0 5.7035361598959256 0.0 8 4.927759052293379E-5 0.0 0.0 6.974848717797094 0.0 9 4.927759052293379E-5 0.0 0.0 7.652317032306389 0.0 10 4.927759052293379E-5 0.0 0.0 8.76781384897404 0.0 11 4.927759052293379E-5 0.0 0.0 10.680671357893285 0.0 12 4.927759052293379E-5 0.0 0.0 12.23345751286145 0.0 13 4.927759052293379E-5 0.0 0.0 12.766788875091164 0.0 14 9.855518104586758E-5 0.0 0.0 12.961336802475707 0.0 15 9.855518104586758E-5 0.0 0.0 13.204570989296908 6.898862673210731E-4 16 9.855518104586758E-5 0.0 0.0 13.7765359824966 6.898862673210731E-4 17 9.855518104586758E-5 0.0 0.0 14.699800918534287 6.898862673210731E-4 18 9.855518104586758E-5 0.0 0.0 15.69018193286421 6.898862673210731E-4 19 9.855518104586758E-5 0.0 0.0 16.424960085151678 6.898862673210731E-4 20 9.855518104586758E-5 0.0 0.0 17.11765517513256 6.898862673210731E-4 21 9.855518104586758E-5 0.0 0.0 18.166282301460587 6.898862673210731E-4 22 9.855518104586758E-5 0.0 0.0 19.296660950466165 6.898862673210731E-4 23 9.855518104586758E-5 0.0 0.0 20.468531330692056 6.898862673210731E-4 24 9.855518104586758E-5 0.0 0.0 21.32275836240711 6.898862673210731E-4 25 9.855518104586758E-5 0.0 0.0 22.070250133049495 6.898862673210731E-4 26 9.855518104586758E-5 0.0 0.0 22.728697297616936 6.898862673210731E-4 27 9.855518104586758E-5 0.0 0.0 23.382758756627837 6.898862673210731E-4 28 1.4783277156880137E-4 0.0 0.0 24.0829440403682 6.898862673210731E-4 29 1.4783277156880137E-4 0.0 0.0 24.82885892811385 6.898862673210731E-4 30 1.9711036209173516E-4 0.0 0.0 25.60434037017326 6.898862673210731E-4 31 3.4494313366053653E-4 0.0 0.0 26.382088581396722 6.898862673210731E-4 32 3.9422072418347033E-4 0.0 0.0 27.088384286361933 6.898862673210731E-4 33 3.9422072418347033E-4 0.0 0.0 27.80552106124219 6.898862673210731E-4 34 4.434983147064041E-4 0.0 0.0 28.48983896083417 6.898862673210731E-4 35 4.434983147064041E-4 0.0 0.0 29.208306230658547 6.898862673210731E-4 36 4.434983147064041E-4 0.0 0.0 29.89691128062602 6.898862673210731E-4 37 4.434983147064041E-4 0.0 0.0 30.580194350817024 6.898862673210731E-4 38 4.434983147064041E-4 0.0 0.0 31.27402282537993 6.898862673210731E-4 39 4.434983147064041E-4 0.0 0.0 31.955039126406874 6.898862673210731E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTATCCG 40 6.8193913E-9 45.0 1 GCGTAAT 20 7.0345646E-4 45.0 9 CGTTTTT 16245 0.0 44.030468 1 GCGCGAC 140 0.0 41.785713 9 CTAGCGG 110 0.0 40.909092 2 GCTACGA 195 0.0 40.384617 10 GATACGA 35 6.250655E-6 38.571426 9 TTTTGCG 1750 0.0 38.314285 1 TTGGGAC 5250 0.0 38.271427 5 GGCGATC 665 0.0 38.23308 8 GGCACCG 660 0.0 38.18182 8 TCTTGCG 640 0.0 37.96875 1 TTTGGGC 5545 0.0 37.858433 4 CGCGACC 155 0.0 37.741936 10 GACCGAT 865 0.0 37.716763 9 CGGGATC 910 0.0 37.58242 6 AGCGTCG 30 1.1402301E-4 37.499996 17 CCGGTCG 30 1.1402301E-4 37.499996 16 CGCACCG 30 1.1402301E-4 37.499996 22 CGTTTGG 1295 0.0 37.355213 2 >>END_MODULE