SRR2934423.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934423.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	641887
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1920	0.29911806906823163	No Hit
GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG	932	0.14519689602687078	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCACGAC	20	7.030955E-4	45.000004	24
AAACTCG	20	7.030955E-4	45.000004	17
AACCGGT	20	7.030955E-4	45.000004	39
GTTTCGA	20	7.030955E-4	45.000004	17
CAACGCG	20	7.030955E-4	45.000004	28
ACGTTCG	20	7.030955E-4	45.000004	42
TAGACGC	20	7.030955E-4	45.000004	34
CGGCCGT	20	7.030955E-4	45.000004	6
CGACAAC	20	7.030955E-4	45.000004	11
ATCGTAA	20	7.030955E-4	45.000004	20
GTATCGA	20	7.030955E-4	45.000004	9
TCCGTAG	20	7.030955E-4	45.000004	1
CTCGAGG	20	7.030955E-4	45.000004	1
TCGACGA	20	7.030955E-4	45.000004	12
ATTTGCG	40	6.8066583E-9	45.000004	1
TTCGAAC	20	7.030955E-4	45.000004	38
TGTCGAG	20	7.030955E-4	45.000004	1
TCGCGAT	20	7.030955E-4	45.000004	21
ATCGATT	20	7.030955E-4	45.000004	10
TATCCGG	20	7.030955E-4	45.000004	2