##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934423.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 641887 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.155158150889484 33.0 31.0 34.0 30.0 34.0 2 32.352160115409724 34.0 31.0 34.0 30.0 34.0 3 32.41278449322077 34.0 31.0 34.0 30.0 34.0 4 35.92594335139986 37.0 35.0 37.0 35.0 37.0 5 35.8839702315205 37.0 35.0 37.0 35.0 37.0 6 35.55818547501352 37.0 35.0 37.0 33.0 37.0 7 35.884716468786564 37.0 35.0 37.0 35.0 37.0 8 35.96936376651965 37.0 35.0 37.0 35.0 37.0 9 37.73461995647209 39.0 38.0 39.0 35.0 39.0 10 37.27006466870337 39.0 37.0 39.0 34.0 39.0 11 37.128647254111705 39.0 37.0 39.0 34.0 39.0 12 36.66477277153144 39.0 35.0 39.0 33.0 39.0 13 36.41201021363573 39.0 35.0 39.0 32.0 39.0 14 36.993403823414404 39.0 35.0 41.0 31.0 41.0 15 37.2164493127295 39.0 35.0 41.0 31.0 41.0 16 37.46362989124254 39.0 35.0 41.0 33.0 41.0 17 37.473463397763155 39.0 35.0 41.0 33.0 41.0 18 37.488963010623365 39.0 35.0 41.0 33.0 41.0 19 37.52377443381779 39.0 35.0 41.0 33.0 41.0 20 37.409746575331795 39.0 35.0 41.0 32.0 41.0 21 37.279867017091796 39.0 35.0 41.0 32.0 41.0 22 37.46362521752271 39.0 35.0 41.0 33.0 41.0 23 37.45446161084428 39.0 35.0 41.0 33.0 41.0 24 37.400618800505384 39.0 35.0 41.0 33.0 41.0 25 37.336534312114125 39.0 35.0 41.0 33.0 41.0 26 37.25831961077261 39.0 35.0 41.0 33.0 41.0 27 37.1967402362098 39.0 35.0 41.0 33.0 41.0 28 37.11659996229866 39.0 35.0 41.0 32.0 41.0 29 37.02115792966675 39.0 35.0 40.0 32.0 41.0 30 36.98388501402895 39.0 35.0 40.0 32.0 41.0 31 36.82214626561996 39.0 35.0 40.0 31.0 41.0 32 36.737706169465966 39.0 35.0 40.0 31.0 41.0 33 36.66859431644511 39.0 35.0 40.0 31.0 41.0 34 36.48442482866922 38.0 35.0 40.0 31.0 41.0 35 36.33751579327826 38.0 35.0 40.0 30.0 41.0 36 35.86584866183612 38.0 35.0 40.0 29.0 41.0 37 35.637574837938764 38.0 34.0 40.0 29.0 41.0 38 35.39432641570868 38.0 34.0 40.0 27.0 41.0 39 35.002456818723545 38.0 34.0 40.0 24.0 41.0 40 34.61619412762683 38.0 34.0 40.0 23.0 41.0 41 34.40563525978872 37.0 34.0 40.0 21.0 41.0 42 34.257129370122776 37.0 33.0 40.0 21.0 41.0 43 34.01018715132103 37.0 33.0 40.0 18.0 41.0 44 33.650879360385865 37.0 33.0 40.0 15.0 41.0 45 33.20229105746027 36.0 33.0 40.0 15.0 41.0 46 32.61306117743466 35.0 32.0 40.0 12.0 41.0 47 32.35329894514143 35.0 31.0 40.0 12.0 41.0 48 32.258070345715055 35.0 31.0 40.0 12.0 41.0 49 32.16974950419622 35.0 31.0 40.0 12.0 41.0 50 31.877707446949387 35.0 30.0 40.0 11.0 41.0 51 30.752454871340284 35.0 27.0 39.0 8.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 14.0 10 15.0 11 5.0 12 16.0 13 10.0 14 12.0 15 28.0 16 38.0 17 83.0 18 175.0 19 288.0 20 503.0 21 805.0 22 1272.0 23 2106.0 24 3234.0 25 4863.0 26 6637.0 27 8941.0 28 11590.0 29 15480.0 30 20214.0 31 25405.0 32 31637.0 33 41498.0 34 64827.0 35 60025.0 36 49076.0 37 64850.0 38 102315.0 39 125888.0 40 34.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.757764217066242 4.728869723175574 55.07776290842469 16.43560315133349 2 21.131601045043755 4.2322090959935315 52.95823096588652 21.677958893076195 3 21.55613059619528 4.772335317587053 50.82498944518272 22.84654464103495 4 20.16195997114757 4.516527052269324 49.9034876855272 25.4180252910559 5 19.098065547362697 5.688072822786565 50.558120042935904 24.655741586914832 6 22.126791787339517 5.803669493228559 53.15390403606865 18.915634683363272 7 82.44472936825329 2.488755809044271 10.380175949972504 4.6863388727299355 8 83.16728645384623 2.8308721005410606 8.614133017182152 5.38770842843055 9 77.27746472509959 5.407805423696071 11.37817092416578 5.9365589270385595 10 44.14826908786126 24.08336669849989 18.351049327996986 13.417314885641865 11 35.295464778068414 22.405189698498333 24.270471282328508 18.02887424110474 12 33.03369596206186 19.830281653935973 28.935155253183193 18.200867130818978 13 29.622192068074288 21.650383946083966 29.77876168235219 18.948662303489556 14 20.163985249740218 24.91778147867148 34.81407163566173 20.104161635926573 15 17.711061292719744 23.97306691053098 38.63842078122785 19.677451015521424 16 25.40119989967081 22.060424965765 32.423619733691446 20.11475540087274 17 25.698760062129317 22.059490221799162 28.697574495199312 23.54417522087221 18 26.654691557859874 21.735757228297192 30.718335158680578 20.891216055162356 19 26.96222232262065 24.981032487026532 28.40764807512849 19.649097115224333 20 26.3032278267047 28.555649203052873 27.92158121289261 17.219541757349813 21 24.15347249593776 26.246987398093435 31.456627101031803 18.142913004937007 22 21.734355112348435 24.155341983869434 32.612749596112714 21.497553307669417 23 21.525284045322618 24.900488715303474 31.738608197393 21.83561904198091 24 23.657746612721553 25.779615415174323 28.28005552379157 22.282582448312553 25 24.42376929272598 23.980233280935742 26.60359222106072 24.992405205277564 26 19.725278748440147 25.22297538351766 28.543341740836002 26.50840412720619 27 19.033724004380833 25.099589180027017 33.33951302955193 22.527173786040223 28 17.878068881282843 24.146461916193974 32.26533642214284 25.710132780380345 29 20.754120273506086 25.955658862073854 31.09020746642322 22.20001339799684 30 24.40382808812143 22.97725300559133 31.991768021474186 20.62715088481306 31 25.027769685318447 25.001441063614 30.266074869875855 19.704714381191703 32 27.855525972640045 24.198028624976047 27.774826410256008 20.1716189921279 33 26.866722647444174 23.198319953512065 28.15775985492774 21.77719754411602 34 21.91725334833078 22.823020251228023 33.171259115701055 22.088467284740148 35 21.539616786132136 25.3388836352816 30.38058100569103 22.74091857289523 36 22.625633483775182 25.792701830696057 29.891086748913747 21.69057793661501 37 22.082547239623175 27.44704285956874 29.64602803920316 20.824381861604923 38 24.310976854181497 25.65545025837881 27.04198714103884 22.991585746400848 39 23.99768183496472 22.09672418977172 28.75848864363977 25.14710533162379 40 26.912992473753167 21.332882579020918 29.357192153759147 22.39693279346676 41 22.3065742101024 22.065098685594194 27.761272622751353 27.86705448155205 42 21.18877621762086 21.661445083013053 30.503811418520705 26.645967280845383 43 20.930007929744644 21.439443391126474 30.730331039575503 26.900217639553382 44 22.369825218457454 21.67094831333241 29.72890867084082 26.230317797369317 45 21.381333474583535 21.13347053297543 27.646454905614227 29.838741086826808 46 21.585107659136266 21.586665565745996 30.196903816403818 26.631322958713916 47 19.595972499832527 23.61038625178575 32.84035975179432 23.953281496587405 48 20.370563666190467 23.958734169721463 31.749825124983055 23.920877039105015 49 23.627834805814732 20.400787054419236 32.66431630489478 23.307061834871245 50 21.178805615318584 21.37447868550072 29.855566478211898 27.591149220968802 51 19.13140474881093 21.81162728019106 28.277251291894057 30.779716679103952 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 152.0 1 481.5 2 811.0 3 1993.5 4 3176.0 5 2147.5 6 1119.0 7 1143.5 8 1168.0 9 1361.0 10 1554.0 11 1677.0 12 1800.0 13 1891.0 14 1982.0 15 1859.0 16 1736.0 17 1787.0 18 1838.0 19 1927.0 20 2016.0 21 1984.5 22 1953.0 23 2090.5 24 2228.0 25 3022.5 26 4566.0 27 5315.0 28 6120.5 29 6926.0 30 7999.0 31 9072.0 32 10003.0 33 10934.0 34 12952.0 35 14970.0 36 16325.0 37 17680.0 38 19498.0 39 21316.0 40 24468.0 41 27620.0 42 30380.0 43 33140.0 44 37339.0 45 41538.0 46 46383.5 47 51229.0 48 57789.5 49 64350.0 50 65328.5 51 66307.0 52 61854.0 53 57401.0 54 51228.0 55 45055.0 56 40733.5 57 36412.0 58 34018.0 59 31624.0 60 28132.0 61 24640.0 62 21512.5 63 18385.0 64 15313.5 65 12242.0 66 9766.0 67 7290.0 68 6139.0 69 4988.0 70 3846.0 71 2704.0 72 2567.5 73 2431.0 74 1959.0 75 1121.0 76 755.0 77 545.5 78 336.0 79 239.5 80 143.0 81 118.0 82 93.0 83 84.5 84 76.0 85 71.5 86 67.0 87 36.5 88 6.0 89 4.0 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 641887.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.966751450046445 #Duplication Level Percentage of deduplicated Percentage of total 1 76.61035449350962 28.320359330615187 2 10.217917344883212 7.5544642165083244 3 3.9187786923378756 4.345935537221768 4 1.9580783388319616 2.895351810852838 5 1.124464796337698 2.0783905320271385 6 0.7256975852218852 1.6096009356477796 7 0.48268223651924413 1.2490235986731597 8 0.37109387372336117 1.097450799565313 9 0.2993408251561833 0.9959092094160396 >10 3.726487557846615 34.33077947566211 >50 0.5162418575989275 11.859119147088748 >100 0.04716283636274959 3.024976167976514 >500 0.001274671253047286 0.33706832423685545 >1k 4.2489041768242877E-4 0.301570914508277 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1920 0.29911806906823163 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 932 0.14519689602687078 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.5579066097303731E-4 0.0 0.0 0.4066136251396274 0.0 2 1.5579066097303731E-4 0.0 0.0 1.7862957187168458 0.0 3 1.5579066097303731E-4 0.0 0.0 2.5535647240090547 0.0 4 1.5579066097303731E-4 0.0 0.0 3.457150557652671 0.0 5 1.5579066097303731E-4 0.0 0.0 4.829510490164156 0.0 6 1.5579066097303731E-4 0.0 0.0 5.686514916176835 0.0 7 1.5579066097303731E-4 0.0 0.0 6.469362987566347 0.0 8 1.5579066097303731E-4 0.0 0.0 7.598377907637949 0.0 9 1.5579066097303731E-4 0.0 0.0 8.188668722064786 0.0 10 1.5579066097303731E-4 0.0 0.0 9.268609583929882 0.0 11 1.5579066097303731E-4 0.0 0.0 11.501868708978371 0.0 12 1.5579066097303731E-4 0.0 0.0 13.40220319152748 0.0 13 3.1158132194607463E-4 0.0 0.0 14.001529864290756 0.0 14 3.1158132194607463E-4 0.0 0.0 14.256403385642644 0.0 15 3.1158132194607463E-4 0.0 0.0 14.614566115219658 0.0 16 3.1158132194607463E-4 0.0 0.0 15.42311964566972 0.0 17 3.1158132194607463E-4 0.0 0.0 16.532349151797746 0.0 18 3.1158132194607463E-4 0.0 0.0 17.766834349348095 0.0 19 3.1158132194607463E-4 0.0 0.0 18.541581306367007 0.0 20 3.1158132194607463E-4 0.0 0.0 19.443141861417974 0.0 21 3.1158132194607463E-4 0.0 0.0 20.62621614084722 0.0 22 6.231626438921493E-4 0.0 0.0 21.823311579764038 0.0 23 6.231626438921493E-4 0.0 0.0 22.819125484703694 0.0 24 6.231626438921493E-4 0.0 0.0 23.638116989438952 0.0 25 6.231626438921493E-4 0.0 0.0 24.34493921827362 0.0 26 6.231626438921493E-4 0.0 0.0 25.020291733591737 0.0 27 6.231626438921493E-4 0.0 0.0 25.82463891619553 0.0 28 6.231626438921493E-4 0.0 0.0 26.505444104647705 0.0 29 6.231626438921493E-4 0.0 0.0 27.32895353855118 0.0 30 6.231626438921493E-4 0.0 0.0 28.155578785674113 0.0 31 6.231626438921493E-4 0.0 0.0 28.882965381757224 0.0 32 6.231626438921493E-4 0.0 0.0 29.5637705702094 0.0 33 6.231626438921493E-4 0.0 0.0 30.22603667000578 0.0 34 6.231626438921493E-4 0.0 0.0 31.02259431956092 0.0 35 6.231626438921493E-4 0.0 0.0 31.7663389350462 0.0 36 6.231626438921493E-4 0.0 0.0 32.46241160827373 0.0 37 6.231626438921493E-4 0.0 0.0 33.182164461969165 0.0 38 6.231626438921493E-4 0.0 0.0 34.04430997979395 0.0 39 6.231626438921493E-4 0.0 0.0 35.73183441945389 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAC 20 7.030955E-4 45.000004 24 AAACTCG 20 7.030955E-4 45.000004 17 AACCGGT 20 7.030955E-4 45.000004 39 GTTTCGA 20 7.030955E-4 45.000004 17 CAACGCG 20 7.030955E-4 45.000004 28 ACGTTCG 20 7.030955E-4 45.000004 42 TAGACGC 20 7.030955E-4 45.000004 34 CGGCCGT 20 7.030955E-4 45.000004 6 CGACAAC 20 7.030955E-4 45.000004 11 ATCGTAA 20 7.030955E-4 45.000004 20 GTATCGA 20 7.030955E-4 45.000004 9 TCCGTAG 20 7.030955E-4 45.000004 1 CTCGAGG 20 7.030955E-4 45.000004 1 TCGACGA 20 7.030955E-4 45.000004 12 ATTTGCG 40 6.8066583E-9 45.000004 1 TTCGAAC 20 7.030955E-4 45.000004 38 TGTCGAG 20 7.030955E-4 45.000004 1 TCGCGAT 20 7.030955E-4 45.000004 21 ATCGATT 20 7.030955E-4 45.000004 10 TATCCGG 20 7.030955E-4 45.000004 2 >>END_MODULE