SRR2934421.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2934421.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2340585
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7340	0.31359681447159576	No Hit
CTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCTTCTGCT	5348	0.22848988607548967	No Hit
TCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCTTCTGC	5153	0.2201586355547865	No Hit
GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG	5037	0.21520260960400925	No Hit
GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGAC	3755	0.16042997797559155	No Hit
GCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCTTCTGC	3717	0.15880645223309559	No Hit
CCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGCCGTCTTCTGC	3405	0.1454764513999705	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGTTTG	830	42.56024	1
CGTTTTT	3645	40.802467	1
CACGACC	710	38.34507	27
TTTGGGA	10275	38.145985	4
CGTTTGG	1595	37.94671	2
TGGGCGA	3055	37.92962	6
TTTGGGC	4555	37.44237	4
TTCTTCG	555	37.2973	1
AACACGT	640	37.265625	41
GGGCGAT	4665	37.186493	7
TTGGGAT	5185	37.058826	5
GCCGATT	195	36.923077	9
GTTTGCG	405	36.666664	1
AGACACG	725	36.62069	24
TCGTTAG	105	36.42857	1
TTGGGCA	2095	36.40811	5
TTGGGAC	4130	36.228813	5
TTGGGAG	5715	36.220474	5
CGAATAG	230	36.195656	26
TTTGTCG	785	36.11465	1