##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2934419.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3285203 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.236618559035776 33.0 31.0 34.0 30.0 34.0 2 32.43983065886644 34.0 31.0 34.0 31.0 34.0 3 32.4704814283927 34.0 31.0 34.0 30.0 34.0 4 35.986589260998485 37.0 35.0 37.0 35.0 37.0 5 35.952716468358275 37.0 35.0 37.0 35.0 37.0 6 35.62810395582861 37.0 35.0 37.0 35.0 37.0 7 35.94887469663214 37.0 35.0 37.0 35.0 37.0 8 36.04452631998692 37.0 35.0 37.0 35.0 37.0 9 37.83299996986488 39.0 38.0 39.0 35.0 39.0 10 37.33121210470099 39.0 37.0 39.0 34.0 39.0 11 37.23253266236516 39.0 37.0 39.0 34.0 39.0 12 37.038541301709515 39.0 37.0 39.0 33.0 39.0 13 36.963227538754836 39.0 37.0 39.0 33.0 39.0 14 37.975103821590324 40.0 37.0 41.0 33.0 41.0 15 38.060594429020064 40.0 37.0 41.0 33.0 41.0 16 38.1450820542901 40.0 37.0 41.0 33.0 41.0 17 38.11623147793302 40.0 37.0 41.0 33.0 41.0 18 38.035875104217304 40.0 37.0 41.0 33.0 41.0 19 38.00931023136165 40.0 37.0 41.0 33.0 41.0 20 37.86988901446882 40.0 36.0 41.0 33.0 41.0 21 37.727379403951595 40.0 36.0 41.0 33.0 41.0 22 37.85157599089006 40.0 36.0 41.0 33.0 41.0 23 37.815901483104696 40.0 36.0 41.0 33.0 41.0 24 37.76547385351834 40.0 36.0 41.0 33.0 41.0 25 37.69202207595695 40.0 35.0 41.0 33.0 41.0 26 37.634430809907336 40.0 35.0 41.0 33.0 41.0 27 37.556925097170556 39.0 35.0 41.0 33.0 41.0 28 37.44519745050763 39.0 35.0 41.0 33.0 41.0 29 37.35929408319669 39.0 35.0 41.0 33.0 41.0 30 37.27032241234408 39.0 35.0 41.0 32.0 41.0 31 37.117390919221734 39.0 35.0 41.0 32.0 41.0 32 36.93121703590311 39.0 35.0 41.0 31.0 41.0 33 36.75181229287809 39.0 35.0 41.0 31.0 41.0 34 36.480558735639775 39.0 35.0 41.0 30.0 41.0 35 36.3439665676672 39.0 35.0 41.0 30.0 41.0 36 36.15356646149416 39.0 35.0 41.0 29.0 41.0 37 36.06274650303193 39.0 35.0 41.0 29.0 41.0 38 35.99089158265106 39.0 35.0 41.0 29.0 41.0 39 35.912984068260016 39.0 35.0 41.0 28.0 41.0 40 35.75430102797301 39.0 35.0 41.0 27.0 41.0 41 35.630322996782844 39.0 35.0 40.0 26.0 41.0 42 35.58564447919961 39.0 35.0 40.0 26.0 41.0 43 35.5225877974664 38.0 35.0 40.0 26.0 41.0 44 35.406837263937724 38.0 34.0 40.0 26.0 41.0 45 35.48096479882674 38.0 34.0 40.0 26.0 41.0 46 35.419959131901436 38.0 34.0 40.0 26.0 41.0 47 35.21726237313189 38.0 34.0 40.0 26.0 41.0 48 35.09985592975533 38.0 34.0 40.0 25.0 41.0 49 35.07990982596814 38.0 34.0 40.0 26.0 41.0 50 34.95443904075334 38.0 34.0 40.0 25.0 41.0 51 34.04221109015181 37.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 5.0 9 36.0 10 65.0 11 53.0 12 45.0 13 39.0 14 69.0 15 105.0 16 195.0 17 440.0 18 836.0 19 1625.0 20 2939.0 21 4634.0 22 7208.0 23 11347.0 24 18021.0 25 28714.0 26 41064.0 27 48218.0 28 50892.0 29 54473.0 30 62024.0 31 75399.0 32 96049.0 33 132416.0 34 205440.0 35 224173.0 36 260140.0 37 388203.0 38 658129.0 39 911874.0 40 331.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.906286156441475 4.068759221271867 55.1964368716332 17.82851775065346 2 22.905829563652535 3.922071177945472 52.20450608379452 20.967593174607472 3 20.1695602981003 4.144218789523813 53.81061687816552 21.875604034210365 4 18.222466008949826 4.537436499357878 53.09824080886326 24.141856682829037 5 17.949058246933294 5.413424984696532 52.68694202458721 23.95057474378296 6 21.358771436650947 5.732187630414316 54.89274178795039 18.016299144984345 7 82.98312159096409 1.8755614188833993 11.289165387953195 3.8521516021993163 8 85.56177502577466 2.0265109949065554 9.357717011703691 3.053996967615091 9 80.26639449677843 4.860673754407261 10.933144770658009 3.939786978156297 10 35.74363593360898 36.17000227991999 16.691053794849207 11.395307991621827 11 25.56067311517736 23.031605657245535 33.04812518434934 18.359596043227768 12 24.037114297046482 21.907869924628706 34.82040531437479 19.234610463950023 13 24.12197967675057 20.912832479454085 36.0871763480065 18.878011495788844 14 19.65202759159784 23.607795317366996 36.52940168385332 20.21077540718184 15 18.304530952881755 24.817461812862096 37.50937156699297 19.368635667263177 16 23.701183762464602 24.92126057354751 32.93863423356182 18.438921430426063 17 23.782579036972752 24.37852394509563 32.42740250754672 19.411494510384898 18 23.663164802905634 23.665660843485167 33.56300965267595 19.108164700933244 19 23.24523020343035 25.548771263145685 31.812615537000298 19.39338299642366 20 23.125268058016506 28.34287561529683 31.154056537754286 17.377799788932375 21 23.834417538276934 25.47751234855198 33.469469009982035 17.21860110318906 22 22.59169372486266 22.57869605013754 34.722907534176734 20.106702690823063 23 21.08177181136143 24.120305503191126 34.25989200667356 20.538030678773882 24 20.980195135582186 25.43276625523598 32.73523736584924 20.851801243332606 25 22.022718230806436 26.266626445915215 30.617042538923773 21.093612784354573 26 20.652057117931523 26.44311477859968 30.837759493096772 22.067068610372022 27 19.741671975826154 25.470085105851908 34.00724399679411 20.780998921527832 28 18.735341469005114 26.053214976365236 32.492634397326434 22.718809157303216 29 20.93505332851577 25.774754254151112 32.00968098470627 21.28051143262684 30 22.904307587689406 24.40302775810201 32.568276602693956 20.124388051514625 31 21.990087066156946 26.248210536761352 31.581001234931293 20.180701162150406 32 23.556230771736175 26.151138909832973 29.57902449255038 20.71360582588047 33 23.479310106559627 25.425612968209272 29.991419099519877 21.103657825711228 34 21.25609893817825 26.17025492792987 31.543621505276842 21.030024628615035 35 21.132149215741006 27.626694606086748 29.954222006981002 21.286934171191245 36 23.16252602959391 27.762972333825335 28.879920053646607 20.194581582934145 37 21.17199454645573 29.150101226621306 29.065662000186897 20.612242226736065 38 21.937000544563 27.985789614827457 28.68860767508127 21.38860216552828 39 21.984638392208943 26.16858075437043 28.523929875870685 23.32285097754994 40 23.418004914764783 26.220693211347974 29.512209747769013 20.849092126118236 41 20.95739593565451 27.044051767881623 29.12517126034525 22.87338103611862 42 21.540464927129314 26.387958369695873 30.452760453463608 21.618816249711205 43 21.28471208628508 25.236066081761155 31.113967690885463 22.3652541410683 44 22.13254401630584 25.12277019106582 29.563713414361303 23.180972378267036 45 21.644842038680714 24.515684418892835 28.80029027125569 25.039183271170764 46 21.289399772251517 25.5307815072615 30.07613228162765 23.103686438859334 47 19.96025816365077 26.583988873746918 31.357788240178763 22.097964722423548 48 20.267879945318448 27.096468620051787 30.47081108838632 22.164840346243444 49 22.543294889235156 25.136315777137668 30.36421189192875 21.956177441698426 50 21.010604215325507 25.429174391962995 29.25414350346082 24.30607788925068 51 20.39508669631679 25.75655142163209 29.09381855550479 24.754543326546337 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 470.0 1 1876.5 2 3283.0 3 25654.5 4 48026.0 5 32082.5 6 16139.0 7 15839.5 8 15540.0 9 15830.5 10 16121.0 11 15648.5 12 15176.0 13 14937.5 14 14699.0 15 14132.0 16 13565.0 17 13378.5 18 13192.0 19 13564.5 20 13937.0 21 14693.0 22 15449.0 23 18744.0 24 22039.0 25 26455.0 26 38124.5 27 45378.0 28 51791.5 29 58205.0 30 66264.0 31 74323.0 32 83553.0 33 92783.0 34 104064.0 35 115345.0 36 122220.5 37 129096.0 38 136391.0 39 143686.0 40 155207.0 41 166728.0 42 176231.5 43 185735.0 44 197202.0 45 208669.0 46 231211.0 47 253753.0 48 273331.5 49 292910.0 50 287336.0 51 281762.0 52 254827.5 53 227893.0 54 207110.0 55 186327.0 56 170306.0 57 154285.0 58 139527.0 59 124769.0 60 110204.5 61 95640.0 62 83196.5 63 70753.0 64 60544.0 65 50335.0 66 42137.0 67 33939.0 68 27012.0 69 20085.0 70 16384.0 71 12683.0 72 11023.5 73 9364.0 74 7714.0 75 4614.0 76 3164.0 77 2466.5 78 1769.0 79 1208.0 80 647.0 81 520.0 82 393.0 83 257.0 84 121.0 85 82.5 86 44.0 87 35.0 88 26.0 89 20.0 90 14.0 91 10.0 92 6.0 93 4.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3285203.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.318876296555484 #Duplication Level Percentage of deduplicated Percentage of total 1 73.71210676054083 19.40019819389165 2 10.140940063197048 5.337962941081333 3 3.7960446438180613 2.9972288819054866 4 1.9781301195830276 2.0824864766318485 5 1.2102368729634465 1.5926037274527536 6 0.8258708819163592 1.3041596146850303 7 0.5777773367313523 1.0644515176670022 8 0.4661732372304192 0.9815324610745771 9 0.3903395253340649 0.9245967912831095 >10 5.566846574323083 35.12144805706458 >50 1.2245005259833404 21.64195564099476 >100 0.1036433944259897 4.437490723203659 >500 0.004809406699509957 0.7932438430522956 >1k 0.0023460520485400886 1.2308647458020154 >5k 1.1730260242700442E-4 0.189558542707978 >10k+ 1.1730260242700442E-4 0.900217841501943 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 29159 0.8875859421776979 No Hit CTGTCTCTTATACACATCTGACGCGTACGAAGTCGTATGCCGTCTTCTGCT 6140 0.1868986482722681 No Hit TCTGTCTCTTATACACATCTGACGCGTACGAAGTCGTATGCCGTCTTCTGC 3970 0.12084489147245998 No Hit GCTGTCTCTTATACACATCTGACGCGTACGAAGTCGTATGCCGTCTTCTGC 3546 0.1079385353051242 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 3519 0.10711666828503444 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTACGAAGTCGTATGCC 3517 0.10705578924650927 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.8263711557550628E-4 0.0 0.0 0.20832806983312752 0.0 2 1.8263711557550628E-4 0.0 0.0 0.5836169028215303 0.0 3 1.8263711557550628E-4 0.0 0.0 0.8691700330238344 0.0 4 1.8263711557550628E-4 0.0 0.0 1.2448241402433884 0.0 5 1.8263711557550628E-4 0.0 0.0 1.946181103572595 0.0 6 1.8263711557550628E-4 0.0 0.0 2.667171556826169 0.0 7 1.8263711557550628E-4 0.0 0.0 3.2828412734312002 0.0 8 1.8263711557550628E-4 0.0 0.0 4.142361978848796 0.0 9 2.1307663483809068E-4 0.0 0.0 4.717303618680489 0.0 10 2.1307663483809068E-4 0.0 0.0 5.5504941399359495 0.0 11 2.1307663483809068E-4 0.0 0.0 6.807494087884371 0.0 12 2.1307663483809068E-4 0.0 0.0 7.822438978656722 0.0 13 2.1307663483809068E-4 0.0 0.0 8.171458506521514 0.0 14 2.4351615410067506E-4 0.0 0.0 8.366728022590994 0.0 15 2.4351615410067506E-4 0.0 0.0 8.554387658844826 0.0 16 2.4351615410067506E-4 0.0 0.0 8.912721679603969 0.0 17 2.4351615410067506E-4 0.0 0.0 9.467542797203095 0.0 18 2.7395567336325945E-4 0.0 0.0 10.04921157079182 0.0 19 2.7395567336325945E-4 0.0 0.0 10.479991647395915 0.0 20 2.7395567336325945E-4 0.0 0.0 10.958927043473418 0.0 21 2.7395567336325945E-4 0.0 0.0 11.594747721830279 0.0 22 3.043951926258438E-4 0.0 0.0 12.330196946733581 0.0 23 3.043951926258438E-4 0.0 0.0 13.011402948310957 0.0 24 3.043951926258438E-4 0.0 0.0 13.555813750322278 0.0 25 3.043951926258438E-4 0.0 0.0 14.02354740331115 0.0 26 3.043951926258438E-4 0.0 0.0 14.446017491156558 0.0 27 3.043951926258438E-4 0.0 0.0 14.924526733964385 0.0 28 3.6527423115101257E-4 0.0 0.0 15.395030383206151 0.0 29 3.6527423115101257E-4 0.0 0.0 15.923582195681668 0.0 30 3.6527423115101257E-4 0.0 0.0 16.551092885279843 0.0 31 3.9571375041359694E-4 0.0 0.0 17.05313187647765 0.0 32 3.9571375041359694E-4 0.0 0.0 17.54466923352986 0.0 33 3.9571375041359694E-4 0.0 0.0 18.03803296173783 0.0 34 3.9571375041359694E-4 0.0 0.0 18.573433666047425 0.0 35 3.9571375041359694E-4 0.0 0.0 19.15330650799966 0.0 36 3.9571375041359694E-4 0.0 0.0 19.677414150662837 0.0 37 4.2615326967618137E-4 0.0 0.0 20.188889392832042 0.0 38 4.2615326967618137E-4 0.0 0.0 20.804833065110437 0.0 39 4.2615326967618137E-4 0.0 0.0 21.813294338279857 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 16855 0.0 43.331356 1 TCTAGCG 100 0.0 40.5 1 TACGGGA 705 0.0 39.25532 4 TCTTGCG 1385 0.0 38.98917 1 TGGGCGA 3895 0.0 38.76123 6 TTTGGGA 24310 0.0 38.502674 4 CGTTTGG 2280 0.0 38.19079 2 TTCTTCG 980 0.0 38.112244 1 TTGGGAT 16540 0.0 37.722187 5 TTGGGAC 9605 0.0 37.339924 5 TTCGGGA 4335 0.0 36.955017 4 GGGCGAT 5960 0.0 36.807884 7 TTCGTTG 1340 0.0 36.604477 1 TTGGGCG 3015 0.0 36.567165 5 TTTCGCG 1120 0.0 36.5625 1 GACCGAT 1460 0.0 36.52397 9 TTTTGCG 2680 0.0 36.520523 1 TCTGGGA 11590 0.0 36.51639 4 TGCGGGA 5880 0.0 36.19898 4 TTTGGGC 5675 0.0 36.19824 4 >>END_MODULE